Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 19 869 NP_671714 19 869 XP_006715890 19 869 XP_005250160 19 869 XP_005250159 19 869 NP_058544 16 5631 NP_001136245 16 7355 NP_001136239 16 7355 NP_001136236 16 7355 NP_001136244 16 7355 NP_001136238 16 7355 NP_001136240 16 7355 NP_001136243 16 7355 NP_001136242 16 7355 NP_001136235 16 7355 NP_001136237 16 7355 NP_001136241 16 7355 NP_149045 16 7355 NP_689821 16 7355 NP_003990 16 7355 NP_001189788 16 7355 NP_001123513 16 7355 NP_003020 16 7355 NP_001123512 16 7355 NP_892113 16 7355 NP_848639 16 7355 NP_001768 16 7355 NP_942088 16 7355 XP_005258911 16 7355 XP_005258910 16 7355 XP_005259586 16 7355 XP_006718013 16 7355 XP_006714572 16 7355 XP_005248442 16 7355 XP_005248441 16 7355 XP_005247966 16 7355 XP_005247965 16 7355 XP_005273137 16 7355 XP_005245509 16 7355 XP_005245508 16 7355 XP_005245507 16 7355 XP_005245506 16 7355 NP_036567 16 7355 NP_001138775 15 9605 NP_653287 15 9605 NP_071328 15 9605>NP_005742 Length = 3907 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VTQTELTRE 9 VTQTEL RE Sbjct: 1873 VTQTELMRE 1881>NP_671714 Length = 3899 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VTQTELTRE 9 VTQTEL RE Sbjct: 1873 VTQTELMRE 1881>XP_006715890 Length = 3860 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VTQTELTRE 9 VTQTEL RE Sbjct: 1826 VTQTELMRE 1834>XP_005250160 Length = 3939 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VTQTELTRE 9 VTQTEL RE Sbjct: 1905 VTQTELMRE 1913>XP_005250159 Length = 3952 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VTQTELTRE 9 VTQTEL RE Sbjct: 1905 VTQTELMRE 1913>NP_058544 Length = 594 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TQTELTRE 9 T+T++TRE Sbjct: 176 TRTQITRE 183>NP_001136245 Length = 1932 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VTQTELTR 8 VTQT +TR Sbjct: 432 VTQTGITR 439>NP_001136239 Length = 1915 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VTQTELTR 8 VTQT +TR Sbjct: 417 VTQTGITR 424>NP_001136236 Length = 1957 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VTQTELTR 8 VTQT +TR Sbjct: 454 VTQTGITR 461>NP_001136244 Length = 1677 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VTQTELTR 8 VTQT +TR Sbjct: 454 VTQTGITR 461>NP_001136238 Length = 1952 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VTQTELTR 8 VTQT +TR Sbjct: 454 VTQTGITR 461>NP_001136240 Length = 1935 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VTQTELTR 8 VTQT +TR Sbjct: 432 VTQTGITR 439>NP_001136243 Length = 1682 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VTQTELTR 8 VTQT +TR Sbjct: 459 VTQTGITR 466>NP_001136242 Length = 1539 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VTQTELTR 8 VTQT +TR Sbjct: 454 VTQTGITR 461>NP_001136235 Length = 1962 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VTQTELTR 8 VTQT +TR Sbjct: 459 VTQTGITR 466>NP_001136237 Length = 1886 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VTQTELTR 8 VTQT +TR Sbjct: 454 VTQTGITR 461>NP_001136241 Length = 1790 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VTQTELTR 8 VTQT +TR Sbjct: 466 VTQTGITR 473>NP_149045 Length = 1955 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VTQTELTR 8 VTQT +TR Sbjct: 454 VTQTGITR 461>NP_689821 Length = 451 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTQTELTRE 9 VT+TE T+E Sbjct: 313 VTETEETQE 321>NP_003990 Length = 979 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VTQTELTR 8 +T+TELT+ Sbjct: 827 LTETELTK 834>NP_001189788 Length = 428 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TQTELTRE 9 T+T++TRE Sbjct: 28 TRTQVTRE 35>NP_001123513 Length = 473 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TQTELTRE 9 T+T++TRE Sbjct: 73 TRTQVTRE 80>NP_003020 Length = 474 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TQTELTRE 9 T+T++TRE Sbjct: 73 TRTQVTRE 80>NP_001123512 Length = 584 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TQTELTRE 9 T+T++TRE Sbjct: 183 TRTQVTRE 190>NP_892113 Length = 583 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TQTELTRE 9 T+T++TRE Sbjct: 183 TRTQVTRE 190>NP_848639 Length = 836 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 QTELTR 8 QTELTR Sbjct: 453 QTELTR 458>NP_001768 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TELTRE 9 TELTRE Sbjct: 117 TELTRE 122>NP_942088 Length = 305 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TELTRE 9 TELTRE Sbjct: 117 TELTRE 122>XP_005258911 Length = 798 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 QTELTR 8 QTELTR Sbjct: 415 QTELTR 420>XP_005258910 Length = 810 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 QTELTR 8 QTELTR Sbjct: 427 QTELTR 432>XP_005259586 Length = 425 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TQTELTRE 9 T+T++TRE Sbjct: 17 TRTQVTRE 24>XP_006718013 Length = 1778 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VTQTELTR 8 VTQT +TR Sbjct: 454 VTQTGITR 461>XP_006714572 Length = 647 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VTQTELTR 8 +T+TELT+ Sbjct: 495 LTETELTK 502>XP_005248442 Length = 980 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VTQTELTR 8 +T+TELT+ Sbjct: 828 LTETELTK 835>XP_005248441 Length = 980 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VTQTELTR 8 +T+TELT+ Sbjct: 828 LTETELTK 835>XP_005247966 Length = 293 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TELTRE 9 TELTRE Sbjct: 117 TELTRE 122>XP_005247965 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TELTRE 9 TELTRE Sbjct: 117 TELTRE 122>XP_005273137 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTQTELTRE 9 VT+TE T+E Sbjct: 328 VTETEETQE 336>XP_005245509 Length = 456 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TQTELTRE 9 T+T++TRE Sbjct: 73 TRTQVTRE 80>XP_005245508 Length = 488 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TQTELTRE 9 T+T++TRE Sbjct: 73 TRTQVTRE 80>XP_005245507 Length = 566 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TQTELTRE 9 T+T++TRE Sbjct: 183 TRTQVTRE 190>XP_005245506 Length = 598 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TQTELTRE 9 T+T++TRE Sbjct: 183 TRTQVTRE 190>NP_036567 Length = 582 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TQTELTRE 9 T+T++TRE Sbjct: 174 TRTQVTRE 181>NP_001138775 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VTQTEL 6 VTQTEL Sbjct: 79 VTQTEL 84>NP_653287 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VTQTEL 6 VTQTEL Sbjct: 73 VTQTEL 78>NP_071328 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TQTELTRE 9 TQT TRE Sbjct: 687 TQTTCTRE 694Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.300 0.113 0.264 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 373,738 Number of extensions: 520 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |