Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001002912 17 3301 XP_005270507 17 3301 XP_006710414 17 3301 XP_006710413 17 3301 XP_006710412 17 3301 XP_006710411 17 3301 NP_001186114 17 4312 NP_001186112 17 4312 NP_001186108 17 4312 NP_001001485 17 4312 NP_001186113 17 4312 NP_001001486 17 4312 NP_055197 17 4312 NP_001186110 17 4312 NP_001186109 17 4312 NP_001001487 17 4312 NP_001186111 17 4312 NP_001157565 17 4312 NP_001157567 17 4312 NP_001157566 17 4312 NP_057403 17 4312 NP_115958 17 4312 XP_005255697 17 4312 XP_005255696 17 4312 XP_005255695 17 4312 XP_005255694 17 4312 XP_005253752 17 4312 XP_005253751 17 4312 XP_005247416 17 4312 XP_005247415 17 4312 XP_005247414 17 4312 XP_005247413 17 4312 XP_006713648 17 4312 XP_005247412 17 4312 XP_005247411 17 4312 NP_056161 16 5631 XP_006720156 16 5631 NP_877950 16 7355 NP_689616 16 7355 NP_001192230 16 7355 XP_006714503 16 7355 NP_001177203 15 9605 NP_079409 15 9605 NP_001122060 15 9605 NP_056949 15 9605 NP_001139508 15 9605 NP_001139509 15 9605 NP_443124 15 9605 NP_115993 15 9605 XP_005258386 15 9605 XP_006722589 15 9605 XP_005264631 15 9605 XP_005264630 15 9605 XP_005264629 15 9605 NP_001070248 15 9605>NP_001002912 Length = 1530 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TGQSQELA 9 TGQ++ELA Sbjct: 1237 TGQAEELA 1244>XP_005270507 Length = 788 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TGQSQELA 9 TGQ++ELA Sbjct: 495 TGQAEELA 502>XP_006710414 Length = 834 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TGQSQELA 9 TGQ++ELA Sbjct: 541 TGQAEELA 548>XP_006710413 Length = 848 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TGQSQELA 9 TGQ++ELA Sbjct: 555 TGQAEELA 562>XP_006710412 Length = 1333 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TGQSQELA 9 TGQ++ELA Sbjct: 1040 TGQAEELA 1047>XP_006710411 Length = 1528 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TGQSQELA 9 TGQ++ELA Sbjct: 1235 TGQAEELA 1242>NP_001186114 Length = 888 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTGQSQELA 9 +TG SQE A Sbjct: 569 ITGDSQETA 577>NP_001186112 Length = 923 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTGQSQELA 9 +TG SQE A Sbjct: 553 ITGDSQETA 561>NP_001186108 Length = 919 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTGQSQELA 9 +TG SQE A Sbjct: 569 ITGDSQETA 577>NP_001001485 Length = 888 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTGQSQELA 9 +TG SQE A Sbjct: 569 ITGDSQETA 577>NP_001186113 Length = 903 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTGQSQELA 9 +TG SQE A Sbjct: 553 ITGDSQETA 561>NP_001001486 Length = 949 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTGQSQELA 9 +TG SQE A Sbjct: 569 ITGDSQETA 577>NP_055197 Length = 919 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTGQSQELA 9 +TG SQE A Sbjct: 569 ITGDSQETA 577>NP_001186110 Length = 953 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTGQSQELA 9 +TG SQE A Sbjct: 603 ITGDSQETA 611>NP_001186109 Length = 973 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTGQSQELA 9 +TG SQE A Sbjct: 603 ITGDSQETA 611>NP_001001487 Length = 939 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTGQSQELA 9 +TG SQE A Sbjct: 569 ITGDSQETA 577>NP_001186111 Length = 944 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTGQSQELA 9 +TG SQE A Sbjct: 564 ITGDSQETA 572>NP_001157565 Length = 275 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VTGQSQE 7 VTGQ+QE Sbjct: 7 VTGQNQE 13>NP_001157567 Length = 275 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VTGQSQE 7 VTGQ+QE Sbjct: 7 VTGQNQE 13>NP_001157566 Length = 275 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VTGQSQE 7 VTGQ+QE Sbjct: 7 VTGQNQE 13>NP_057403 Length = 275 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VTGQSQE 7 VTGQ+QE Sbjct: 7 VTGQNQE 13>NP_115958 Length = 553 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VTGQSQE 7 VTGQSQ+ Sbjct: 460 VTGQSQQ 466>XP_005255697 Length = 472 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VTGQSQE 7 VTGQSQ+ Sbjct: 379 VTGQSQQ 385>XP_005255696 Length = 477 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VTGQSQE 7 VTGQSQ+ Sbjct: 384 VTGQSQQ 390>XP_005255695 Length = 558 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VTGQSQE 7 VTGQSQ+ Sbjct: 465 VTGQSQQ 471>XP_005255694 Length = 569 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VTGQSQE 7 VTGQSQ+ Sbjct: 476 VTGQSQQ 482>XP_005253752 Length = 275 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VTGQSQE 7 VTGQ+QE Sbjct: 7 VTGQNQE 13>XP_005253751 Length = 275 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VTGQSQE 7 VTGQ+QE Sbjct: 7 VTGQNQE 13>XP_005247416 Length = 922 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTGQSQELA 9 +TG SQE A Sbjct: 603 ITGDSQETA 611>XP_005247415 Length = 933 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTGQSQELA 9 +TG SQE A Sbjct: 553 ITGDSQETA 561>XP_005247414 Length = 939 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTGQSQELA 9 +TG SQE A Sbjct: 569 ITGDSQETA 577>XP_005247413 Length = 949 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTGQSQELA 9 +TG SQE A Sbjct: 569 ITGDSQETA 577>XP_006713648 Length = 949 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTGQSQELA 9 +TG SQE A Sbjct: 569 ITGDSQETA 577>XP_005247412 Length = 949 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTGQSQELA 9 +TG SQE A Sbjct: 569 ITGDSQETA 577>XP_005247411 Length = 983 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTGQSQELA 9 +TG SQE A Sbjct: 603 ITGDSQETA 611>NP_056161 Length = 2539 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GQSQELA 9 GQSQ+LA Sbjct: 1994 GQSQDLA 2000>XP_006720156 Length = 2497 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GQSQELA 9 GQSQ+LA Sbjct: 1994 GQSQDLA 2000>NP_877950 Length = 775 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VTGQSQ 6 VTGQSQ Sbjct: 259 VTGQSQ 264>NP_689616 Length = 1009 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VTGQSQ 6 VTGQSQ Sbjct: 493 VTGQSQ 498>NP_001192230 Length = 1017 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VTGQSQ 6 VTGQSQ Sbjct: 493 VTGQSQ 498>XP_006714503 Length = 848 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VTGQSQ 6 VTGQSQ Sbjct: 493 VTGQSQ 498>NP_001177203 Length = 927 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VTGQSQELA 9 V+G+SQ+L+ Sbjct: 139 VSGKSQDLS 147>NP_079409 Length = 843 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VTGQSQELA 9 V+G+SQ+L+ Sbjct: 55 VSGKSQDLS 63>NP_001122060 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTGQSQELA 9 VTG +ELA Sbjct: 94 VTGDMKELA 102>NP_056949 Length = 389 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTGQSQELA 9 VTG +ELA Sbjct: 38 VTGDMKELA 46>NP_001139508 Length = 389 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTGQSQELA 9 VTG +ELA Sbjct: 38 VTGDMKELA 46>NP_001139509 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTGQSQELA 9 VTG +ELA Sbjct: 94 VTGDMKELA 102>NP_443124 Length = 2459 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VTGQSQEL 8 V GQ QEL Sbjct: 215 VAGQCQEL 222>NP_115993 Length = 405 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VTGQSQE 7 +TG SQE Sbjct: 131 ITGSSQE 137>XP_005258386 Length = 402 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTGQSQELA 9 VTG +ELA Sbjct: 94 VTGDMKELA 102>XP_006722589 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTGQSQELA 9 VTG +ELA Sbjct: 73 VTGDMKELA 81>XP_005264631 Length = 926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VTGQSQELA 9 V+G+SQ+L+ Sbjct: 139 VSGKSQDLS 147>XP_005264630 Length = 953 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VTGQSQELA 9 V+G+SQ+L+ Sbjct: 139 VSGKSQDLS 147>XP_005264629 Length = 954 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VTGQSQELA 9 V+G+SQ+L+ Sbjct: 139 VSGKSQDLS 147>NP_001070248 Length = 991 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VTGQSQEL 8 V GQ QEL Sbjct: 215 VAGQCQEL 222Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.296 0.112 0.264 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 593,390 Number of extensions: 894 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |