Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001167571 18 1135 NP_127503 18 1135 NP_127501 18 1135 NP_065151 18 1135 XP_006713333 18 1135 XP_005265389 18 1135 XP_005265388 18 1135 XP_006713332 18 1135 XP_006713331 18 1135 XP_006713330 18 1135 XP_006713329 18 1135 XP_005265387 18 1135 XP_006711904 17 2528 NP_003822 17 2528 NP_002833 17 3301 NP_001154912 17 3301 XP_006723375 17 3301 NP_004987 17 4312 XP_006720948 17 4312 XP_006720947 17 4312 XP_005255386 17 4312 XP_005255385 17 4312 XP_005255384 17 4312 XP_006710061 17 4312 XP_006710060 17 4312 NP_057530 16 5631 NP_689594 16 5631 NP_065928 16 5631 NP_065831 16 5631 XP_005256527 16 5631 XP_006712319 16 5631 NP_001186073 16 5631 NP_001027563 16 5631 NP_057393 16 5631 NP_000789 16 7355 NP_031375 16 7355 XP_005276205 16 7355 XP_005249593 16 7355 XP_005277516 16 7355 NP_001026 15 9605 NP_061027 15 9605 NP_060501 15 9605 NP_689414 15 9605 NP_001154994 15 9605 NP_009177 15 9605 NP_001154993 15 9605 XP_005262767 15 9605 XP_006714137 15 9605 XP_006711873 15 9605 XP_006711872 15 9605 XP_006711871 15 9605 XP_006711870 15 9605 XP_006711869 15 9605 XP_006711868 15 9605 XP_006711867 15 9605 XP_006711866 15 9605 XP_006711865 15 9605>NP_001167571 Length = 403 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTACLSTSK 9 +TACL T+K Sbjct: 305 ITACLETAK 313>NP_127503 Length = 403 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTACLSTSK 9 +TACL T+K Sbjct: 305 ITACLETAK 313>NP_127501 Length = 403 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTACLSTSK 9 +TACL T+K Sbjct: 305 ITACLETAK 313>NP_065151 Length = 360 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTACLSTSK 9 +TACL T+K Sbjct: 262 ITACLETAK 270>XP_006713333 Length = 360 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTACLSTSK 9 +TACL T+K Sbjct: 262 ITACLETAK 270>XP_005265389 Length = 383 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTACLSTSK 9 +TACL T+K Sbjct: 285 ITACLETAK 293>XP_005265388 Length = 403 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTACLSTSK 9 +TACL T+K Sbjct: 305 ITACLETAK 313>XP_006713332 Length = 403 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTACLSTSK 9 +TACL T+K Sbjct: 305 ITACLETAK 313>XP_006713331 Length = 403 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTACLSTSK 9 +TACL T+K Sbjct: 305 ITACLETAK 313>XP_006713330 Length = 424 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTACLSTSK 9 +TACL T+K Sbjct: 326 ITACLETAK 334>XP_006713329 Length = 424 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTACLSTSK 9 +TACL T+K Sbjct: 326 ITACLETAK 334>XP_005265387 Length = 426 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VTACLSTSK 9 +TACL T+K Sbjct: 328 ITACLETAK 336>XP_006711904 Length = 630 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VTACLSTSK 9 V++CLSTS+ Sbjct: 36 VSSCLSTSQ 44>NP_003822 Length = 519 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VTACLSTSK 9 +T C+ST K Sbjct: 253 ITGCISTGK 261>NP_002833 Length = 1115 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VTACLSTS 8 +T+C+STS Sbjct: 670 ITSCVSTS 677>NP_001154912 Length = 937 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VTACLSTS 8 +T+C+STS Sbjct: 492 ITSCVSTS 499>XP_006723375 Length = 1137 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VTACLSTS 8 +T+C+STS Sbjct: 692 ITSCVSTS 699>NP_004987 Length = 1531 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VTACLST 7 VTACL T Sbjct: 372 VTACLQT 378>XP_006720948 Length = 1401 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VTACLST 7 VTACL T Sbjct: 242 VTACLQT 248>XP_006720947 Length = 1466 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VTACLST 7 VTACL T Sbjct: 372 VTACLQT 378>XP_005255386 Length = 1472 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VTACLST 7 VTACL T Sbjct: 372 VTACLQT 378>XP_005255385 Length = 1485 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VTACLST 7 VTACL T Sbjct: 326 VTACLQT 332>XP_005255384 Length = 1489 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VTACLST 7 VTACL T Sbjct: 330 VTACLQT 336>XP_006710061 Length = 298 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TACLST 7 TACLST Sbjct: 267 TACLST 272>XP_006710060 Length = 425 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TACLST 7 TACLST Sbjct: 394 TACLST 399>NP_057530 Length = 338 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VTACLSTS 8 VT C+ST+ Sbjct: 291 VTVCISTT 298>NP_689594 Length = 3549 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TACLSTSK 9 T+C+STS+ Sbjct: 412 TSCVSTSQ 419>NP_065928 Length = 4427 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTACLSTSK 9 VT CL T+K Sbjct: 1663 VTKCLLTAK 1671>NP_065831 Length = 1392 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VTACLST 7 +TAC+ST Sbjct: 884 LTACMST 890>XP_005256527 Length = 4427 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VTACLSTSK 9 VT CL T+K Sbjct: 1663 VTKCLLTAK 1671>XP_006712319 Length = 3308 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TACLSTSK 9 T+C+STS+ Sbjct: 171 TSCVSTSQ 178>NP_001186073 Length = 3327 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TACLSTSK 9 T+C+STS+ Sbjct: 190 TSCVSTSQ 197>NP_001027563 Length = 279 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VTACLSTS 8 +T+C STS Sbjct: 10 ITSCCSTS 17>NP_057393 Length = 334 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VTACLSTS 8 +T+C STS Sbjct: 10 ITSCCSTS 17>NP_000789 Length = 477 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VTACLST 7 VTACL T Sbjct: 42 VTACLLT 48>NP_031375 Length = 1069 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VTACLS 6 +TACLS Sbjct: 102 ITACLS 107>XP_005276205 Length = 199 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VTACLST 7 VTACL T Sbjct: 87 VTACLLT 93>XP_005249593 Length = 1074 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VTACLS 6 +TACLS Sbjct: 102 ITACLS 107>XP_005277516 Length = 199 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VTACLST 7 VTACL T Sbjct: 87 VTACLLT 93>NP_001026 Length = 4967 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CLSTSK 9 CLSTS+ Sbjct: 132 CLSTSR 137>NP_061027 Length = 4599 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ACLSTSK 9 ACL T+K Sbjct: 83 ACLGTNK 89>NP_060501 Length = 1151 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CLSTSK 9 CLSTS+ Sbjct: 23 CLSTSR 28>NP_689414 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VTACLST 7 +T CLST Sbjct: 644 LTGCLST 650>NP_001154994 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VTACLSTSK 9 V++C+ST + Sbjct: 485 VSSCMSTGR 493>NP_009177 Length = 593 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VTACLSTSK 9 V++C+ST + Sbjct: 573 VSSCMSTGR 581>NP_001154993 Length = 597 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VTACLSTSK 9 V++C+ST + Sbjct: 577 VSSCMSTGR 585>XP_005262767 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VTACLSTSK 9 V++C+ST + Sbjct: 485 VSSCMSTGR 493>XP_006714137 Length = 588 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VTACLSTSK 9 V++C+ST + Sbjct: 573 VSSCMSTGR 581>XP_006711873 Length = 4954 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CLSTSK 9 CLSTS+ Sbjct: 132 CLSTSR 137>XP_006711872 Length = 2735 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CLSTSK 9 CLSTS+ Sbjct: 132 CLSTSR 137>XP_006711871 Length = 4906 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CLSTSK 9 CLSTS+ Sbjct: 132 CLSTSR 137>XP_006711870 Length = 4965 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CLSTSK 9 CLSTS+ Sbjct: 132 CLSTSR 137>XP_006711869 Length = 4973 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CLSTSK 9 CLSTS+ Sbjct: 132 CLSTSR 137>XP_006711868 Length = 4975 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CLSTSK 9 CLSTS+ Sbjct: 132 CLSTSR 137>XP_006711867 Length = 4977 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CLSTSK 9 CLSTS+ Sbjct: 132 CLSTSR 137>XP_006711866 Length = 4984 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CLSTSK 9 CLSTS+ Sbjct: 132 CLSTSR 137>XP_006711865 Length = 4985 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CLSTSK 9 CLSTS+ Sbjct: 132 CLSTSR 137Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.311 0.110 0.302 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 561,102 Number of extensions: 435 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |