Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_919047 18 1482 XP_005250598 18 1482 NP_004514 18 1935 NP_001128144 17 3301 NP_071346 17 3301 XP_006718002 17 3301 XP_005270081 17 3301 NP_689472 17 4312 XP_006715556 16 5631 XP_006715555 16 5631 XP_006715554 16 5631 XP_006715552 16 5631 XP_005267054 16 5631 XP_006715551 16 5631 XP_006715550 16 5631 XP_006715548 16 5631 XP_006715546 16 5631 NP_001018125 16 7355 NP_149075 16 7355 XP_006713088 16 7355 XP_006713087 16 7355 XP_005265003 16 7355 XP_006713086 16 7355 XP_006713085 16 7355 XP_006713084 16 7355 NP_001421 15 9605 NP_001012680 15 9605 NP_001012682 15 9605 NP_002385 15 9605 NP_001013269 15 9605 NP_037498 15 9605 NP_001034456 15 9605 NP_001034455 15 9605 NP_001687 15 9605 NP_002239 15 9605 NP_005985 15 9605 NP_008949 15 9605 NP_542384 15 9605 XP_005259964 15 9605 XP_005259963 15 9605 XP_005259962 15 9605 XP_006717721 15 9605 XP_006717396 15 9605 XP_006717395 15 9605 XP_005252375 15 9605 XP_006717394 15 9605 XP_006717393 15 9605 XP_006717391 15 9605 XP_006717390 15 9605 XP_006717007 15 9605 XP_006717005 15 9605 XP_006717004 15 9605 XP_006717003 15 9605 XP_005251736 15 9605 XP_005264691 15 9605 XP_005264690 15 9605 NP_689848 15 9605>NP_919047 Length = 520 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSGLESRLD 9 VSGLESR D Sbjct: 462 VSGLESRPD 470>XP_005250598 Length = 457 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VSGLESRLD 9 VSGLESR D Sbjct: 399 VSGLESRPD 407>NP_004514 Length = 1056 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VSGLESRLD 9 VSGL S+LD Sbjct: 510 VSGLHSKLD 518>NP_001128144 Length = 233 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SGLESRLD 9 SGLE R+D Sbjct: 152 SGLEKRID 159>NP_071346 Length = 233 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SGLESRLD 9 SGLE R+D Sbjct: 152 SGLEKRID 159>XP_006718002 Length = 233 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SGLESRLD 9 SGLE R+D Sbjct: 152 SGLEKRID 159>XP_005270081 Length = 240 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SGLESRLD 9 SGLE R+D Sbjct: 159 SGLEKRID 166>NP_689472 Length = 1910 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VSGLESRLD 9 V GLE +LD Sbjct: 942 VDGLEDKLD 950>XP_006715556 Length = 1051 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VSGLESRLD 9 VSG E RLD Sbjct: 98 VSGEERRLD 106>XP_006715555 Length = 1638 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VSGLESRLD 9 VSG E RLD Sbjct: 98 VSGEERRLD 106>XP_006715554 Length = 1768 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VSGLESRLD 9 VSG E RLD Sbjct: 98 VSGEERRLD 106>XP_006715552 Length = 1817 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VSGLESRLD 9 VSG E RLD Sbjct: 98 VSGEERRLD 106>XP_005267054 Length = 1823 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VSGLESRLD 9 VSG E RLD Sbjct: 98 VSGEERRLD 106>XP_006715551 Length = 1825 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VSGLESRLD 9 VSG E RLD Sbjct: 98 VSGEERRLD 106>XP_006715550 Length = 1830 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VSGLESRLD 9 VSG E RLD Sbjct: 98 VSGEERRLD 106>XP_006715548 Length = 1831 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VSGLESRLD 9 VSG E RLD Sbjct: 98 VSGEERRLD 106>XP_006715546 Length = 1832 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VSGLESRLD 9 VSG E RLD Sbjct: 98 VSGEERRLD 106>NP_001018125 Length = 1451 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSGLESRLD 9 VSGLES ++ Sbjct: 97 VSGLESYIE 105>NP_149075 Length = 1471 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSGLESRLD 9 VSGLES ++ Sbjct: 97 VSGLESYIE 105>XP_006713088 Length = 1382 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSGLESRLD 9 VSGLES ++ Sbjct: 97 VSGLESYIE 105>XP_006713087 Length = 1432 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSGLESRLD 9 VSGLES ++ Sbjct: 97 VSGLESYIE 105>XP_005265003 Length = 1451 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSGLESRLD 9 VSGLES ++ Sbjct: 97 VSGLESYIE 105>XP_006713086 Length = 1458 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSGLESRLD 9 VSGLES ++ Sbjct: 97 VSGLESYIE 105>XP_006713085 Length = 1471 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSGLESRLD 9 VSGLES ++ Sbjct: 97 VSGLESYIE 105>XP_006713084 Length = 1471 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSGLESRLD 9 VSGLES ++ Sbjct: 97 VSGLESYIE 105>NP_001421 Length = 870 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VSGLESRL 8 VSG+ SRL Sbjct: 819 VSGMASRL 826>NP_001012680 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VSGLESRLD 9 ++GL+ RLD Sbjct: 242 LAGLKGRLD 250>NP_001012682 Length = 568 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VSGLESRLD 9 ++GL+ RLD Sbjct: 179 LAGLKGRLD 187>NP_002385 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VSGLESRLD 9 ++GL+ RLD Sbjct: 241 LAGLKGRLD 249>NP_001013269 Length = 529 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VSGLESRLD 9 ++GL+ RLD Sbjct: 140 LAGLKGRLD 148>NP_037498 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LESRLD 9 LESRLD Sbjct: 118 LESRLD 123>NP_001034456 Length = 196 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LESRLD 9 LESRLD Sbjct: 166 LESRLD 171>NP_001034455 Length = 204 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LESRLD 9 LESRLD Sbjct: 174 LESRLD 179>NP_001687 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LESRLD 9 LESRLD Sbjct: 196 LESRLD 201>NP_002239 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LESRLD 9 LESRLD Sbjct: 485 LESRLD 490>NP_005985 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VSGLESR 7 VSGLES+ Sbjct: 695 VSGLESQ 701>NP_008949 Length = 2325 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LESRLD 9 LESRLD Sbjct: 574 LESRLD 579>NP_542384 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LESRLD 9 LESRLD Sbjct: 196 LESRLD 201>XP_005259964 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LESRLD 9 LESRLD Sbjct: 565 LESRLD 570>XP_005259963 Length = 626 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LESRLD 9 LESRLD Sbjct: 568 LESRLD 573>XP_005259962 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LESRLD 9 LESRLD Sbjct: 571 LESRLD 576>XP_006717721 Length = 490 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSGLESRLD 9 VSGLES ++ Sbjct: 426 VSGLESLVE 434>XP_006717396 Length = 549 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SGLESR 7 SGLESR Sbjct: 354 SGLESR 359>XP_006717395 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SGLESR 7 SGLESR Sbjct: 382 SGLESR 387>XP_005252375 Length = 585 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SGLESR 7 SGLESR Sbjct: 412 SGLESR 417>XP_006717394 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SGLESR 7 SGLESR Sbjct: 395 SGLESR 400>XP_006717393 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SGLESR 7 SGLESR Sbjct: 412 SGLESR 417>XP_006717391 Length = 607 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SGLESR 7 SGLESR Sbjct: 412 SGLESR 417>XP_006717390 Length = 607 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SGLESR 7 SGLESR Sbjct: 412 SGLESR 417>XP_006717007 Length = 1499 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LESRLD 9 LESRLD Sbjct: 574 LESRLD 579>XP_006717005 Length = 1788 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LESRLD 9 LESRLD Sbjct: 22 LESRLD 27>XP_006717004 Length = 2240 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LESRLD 9 LESRLD Sbjct: 574 LESRLD 579>XP_006717003 Length = 2278 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LESRLD 9 LESRLD Sbjct: 574 LESRLD 579>XP_005251736 Length = 2325 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LESRLD 9 LESRLD Sbjct: 574 LESRLD 579>XP_005264691 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LESRLD 9 LESRLD Sbjct: 196 LESRLD 201>XP_005264690 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LESRLD 9 LESRLD Sbjct: 196 LESRLD 201>NP_689848 Length = 545 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VSGLESRLD 9 VSGLES ++ Sbjct: 426 VSGLESLVE 434Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.132 0.329 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 457,998 Number of extensions: 658 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |