Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000542 20 299 NP_937799 20 299 NP_112565 17 3301 NP_002931 17 3301 NP_001035809 17 3301 NP_001180215 17 4312 NP_036369 17 4312 NP_085096 17 4312 NP_061092 17 4312 NP_001032728 17 4312 XP_006723174 17 4312 XP_005247642 17 4312 XP_005247641 17 4312 XP_005247640 17 4312 XP_005247639 17 4312 NP_001191355 16 5631 NP_005060 16 5631 NP_002305 16 5631 XP_005264359 16 5631 NP_033664 16 5631 NP_001073943 16 5631 NP_001139280 16 7355 NP_000623 16 7355 NP_001979 16 7355 NP_775872 16 7355 NP_055401 16 7355 NP_001093120 16 7355 XP_006721108 16 7355 NP_036230 15 9605 NP_057331 15 9605 NP_112203 15 9605 NP_001138396 15 9605 NP_001185982 15 9605 NP_569733 15 9605 NP_904324 15 9605 NP_689763 15 9605 XP_005255663 15 9605 XP_005255661 15 9605 XP_006719745 15 9605 XP_006719744 15 9605 XP_005254044 15 9605 XP_006719294 15 9605 XP_006714820 15 9605 XP_005268437 15 9605 NP_001138947 15 9605 NP_001012660 15 9605>NP_000542 Length = 213 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VRSLVKPDN 9 VRSLVKP+N Sbjct: 166 VRSLVKPEN 174>NP_937799 Length = 172 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VRSLVKPDN 9 VRSLVKP+N Sbjct: 125 VRSLVKPEN 133>NP_112565 Length = 123 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LVKPDN 9 LVKPDN Sbjct: 6 LVKPDN 11>NP_002931 Length = 599 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRSLVKPD 8 +RSL+ PD Sbjct: 259 IRSLINPD 266>NP_001035809 Length = 599 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VRSLVKPD 8 +RSL+ PD Sbjct: 259 IRSLINPD 266>NP_001180215 Length = 234 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RSLVKPD 8 +SLVKPD Sbjct: 188 QSLVKPD 194>NP_036369 Length = 389 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RSLVKPD 8 +SLVKPD Sbjct: 225 QSLVKPD 231>NP_085096 Length = 352 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RSLVKPD 8 +SLVKPD Sbjct: 188 QSLVKPD 194>NP_061092 Length = 379 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VRSLVKP 7 +RSL+KP Sbjct: 95 IRSLIKP 101>NP_001032728 Length = 329 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VRSLVKP 7 +RSL+KP Sbjct: 95 IRSLIKP 101>XP_006723174 Length = 352 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RSLVKPD 8 +SLVKPD Sbjct: 188 QSLVKPD 194>XP_005247642 Length = 344 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VRSLVKP 7 +RSL+KP Sbjct: 95 IRSLIKP 101>XP_005247641 Length = 345 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VRSLVKP 7 +RSL+KP Sbjct: 95 IRSLIKP 101>XP_005247640 Length = 360 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VRSLVKP 7 +RSL+KP Sbjct: 95 IRSLIKP 101>XP_005247639 Length = 394 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VRSLVKP 7 +RSL+KP Sbjct: 95 IRSLIKP 101>NP_001191355 Length = 613 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VRSLVKPD 8 +RSL KPD Sbjct: 461 LRSLKKPD 468>NP_005060 Length = 667 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RSLVKPDN 9 R LVKP N Sbjct: 367 RKLVKPKN 374>NP_002305 Length = 647 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VRSLVKPD 8 +RSL KPD Sbjct: 495 LRSLKKPD 502>XP_005264359 Length = 922 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VRSLVKPDN 9 +RSL KP N Sbjct: 835 LRSLPKPQN 843>NP_033664 Length = 570 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RSLVKPDN 9 R LVKP N Sbjct: 367 RKLVKPKN 374>NP_001073943 Length = 922 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VRSLVKPDN 9 +RSL KP N Sbjct: 835 LRSLPKPQN 843>NP_001139280 Length = 1153 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RSLVKP 7 RSLVKP Sbjct: 212 RSLVKP 217>NP_000623 Length = 1152 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RSLVKP 7 RSLVKP Sbjct: 212 RSLVKP 217>NP_001979 Length = 2033 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VRSLVKPD 8 +RSLV PD Sbjct: 196 LRSLVGPD 203>NP_775872 Length = 440 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VRSLVKP 7 +RSL+KP Sbjct: 395 IRSLLKP 401>NP_055401 Length = 714 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VRSLVKPD 8 +RSL++PD Sbjct: 297 LRSLLEPD 304>NP_001093120 Length = 409 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VRSLVKP 7 +RSL+KP Sbjct: 364 IRSLLKP 370>XP_006721108 Length = 613 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RSLVKP 7 RSLVKP Sbjct: 212 RSLVKP 217>NP_036230 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVKPDN 9 LVKP+N Sbjct: 293 LVKPEN 298>NP_057331 Length = 1241 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SLVKPD 8 S+VKPD Sbjct: 764 SMVKPD 769>NP_112203 Length = 774 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVKPDN 9 LVKP+N Sbjct: 261 LVKPEN 266>NP_001138396 Length = 743 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVKPDN 9 LVKP+N Sbjct: 261 LVKPEN 266>NP_001185982 Length = 774 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVKPDN 9 LVKP+N Sbjct: 261 LVKPEN 266>NP_569733 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 RSLVKPD 8 RS++KP+ Sbjct: 904 RSIIKPE 910>NP_904324 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 RSLVKPD 8 RS++KP+ Sbjct: 904 RSIIKPE 910>NP_689763 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVKPDN 9 LVKP+N Sbjct: 626 LVKPEN 631>XP_005255663 Length = 743 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVKPDN 9 LVKP+N Sbjct: 261 LVKPEN 266>XP_005255661 Length = 774 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVKPDN 9 LVKP+N Sbjct: 261 LVKPEN 266>XP_006719745 Length = 1043 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 RSLVKPD 8 RS++KP+ Sbjct: 904 RSIIKPE 910>XP_006719744 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 RSLVKPD 8 RS++KP+ Sbjct: 904 RSIIKPE 910>XP_005254044 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 RSLVKPD 8 RS++KP+ Sbjct: 904 RSIIKPE 910>XP_006719294 Length = 2348 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VRSLVKP 7 +RSLV+P Sbjct: 582 IRSLVEP 588>XP_006714820 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVKPDN 9 LVKP+N Sbjct: 626 LVKPEN 631>XP_005268437 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVKPDN 9 LVKP+N Sbjct: 632 LVKPEN 637>NP_001138947 Length = 2351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VRSLVKP 7 +RSLV+P Sbjct: 582 IRSLVEP 588>NP_001012660 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RSLVKPDN 9 RSL PDN Sbjct: 217 RSLSLPDN 224Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.133 0.366 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 614,107 Number of extensions: 717 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |