Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245210 19 665 NP_000242 19 665 XP_005264389 19 665 NP_003195 17 4312 NP_037458 17 4312 NP_001263271 17 4312 XP_006722508 17 4312 XP_005257472 17 4312 XP_005257470 17 4312 XP_005257469 17 4312 XP_005257468 17 4312 XP_005257467 17 4312 NP_006717 16 5631 NP_056493 16 5631 NP_001186211 16 5631 XP_006719869 16 5631 XP_006719868 16 5631 XP_005266409 16 5631 XP_005266407 16 5631 XP_005266403 16 5631 XP_006719867 16 5631 XP_006719866 16 5631 XP_005266405 16 5631 XP_005266404 16 5631 XP_005263433 16 5631 XP_005263432 16 5631 XP_005263431 16 5631 XP_006714492 16 5631 XP_005263430 16 5631 XP_005263429 16 5631 NP_001191126 16 5631 NP_001157871 16 7355 NP_653197 15 9605 NP_001275710 15 9605 NP_938051 15 9605 NP_938052 15 9605 NP_001275711 15 9605 NP_001275712 15 9605 XP_006721522 15 9605 XP_006720100 15 9605 XP_006720099 15 9605 XP_006720098 15 9605 NP_653282 15 9605 NP_001151733 15 9605>NP_001245210 Length = 868 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VRALNLFQ 8 VRALNLFQ Sbjct: 241 VRALNLFQ 248>NP_000242 Length = 934 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VRALNLFQ 8 VRALNLFQ Sbjct: 307 VRALNLFQ 314>XP_005264389 Length = 921 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VRALNLFQ 8 VRALNLFQ Sbjct: 307 VRALNLFQ 314>NP_003195 Length = 772 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VRALNLFQV 9 VRAL+ FQV Sbjct: 87 VRALDRFQV 95>NP_037458 Length = 657 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRALNLFQV 9 +R+LN FQ+ Sbjct: 487 IRSLNQFQI 495>NP_001263271 Length = 561 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRALNLFQV 9 +R+LN FQ+ Sbjct: 439 IRSLNQFQI 447>XP_006722508 Length = 609 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VRALNLFQV 9 +R+LN FQ+ Sbjct: 487 IRSLNQFQI 495>XP_005257472 Length = 731 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VRALNLFQV 9 VRAL+ FQV Sbjct: 87 VRALDRFQV 95>XP_005257470 Length = 742 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VRALNLFQV 9 VRAL+ FQV Sbjct: 87 VRALDRFQV 95>XP_005257469 Length = 742 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VRALNLFQV 9 VRAL+ FQV Sbjct: 87 VRALDRFQV 95>XP_005257468 Length = 761 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VRALNLFQV 9 VRAL+ FQV Sbjct: 87 VRALDRFQV 95>XP_005257467 Length = 772 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VRALNLFQV 9 VRAL+ FQV Sbjct: 87 VRALDRFQV 95>NP_006717 Length = 2863 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VRALNLF 7 VRALN+F Sbjct: 2438 VRALNVF 2444>NP_056493 Length = 2946 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VRALNLF 7 VRALN+F Sbjct: 2512 VRALNVF 2518>NP_001186211 Length = 2851 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VRALNLF 7 VRALN+F Sbjct: 2427 VRALNVF 2433>XP_006719869 Length = 2943 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VRALNLF 7 VRALN+F Sbjct: 2509 VRALNVF 2515>XP_006719868 Length = 2938 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VRALNLF 7 VRALN+F Sbjct: 2509 VRALNVF 2515>XP_005266409 Length = 1430 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VRALNLF 7 VRALN+F Sbjct: 975 VRALNVF 981>XP_005266407 Length = 2641 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VRALNLF 7 VRALN+F Sbjct: 2186 VRALNVF 2192>XP_005266403 Length = 2941 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VRALNLF 7 VRALN+F Sbjct: 2512 VRALNVF 2518>XP_006719867 Length = 2961 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VRALNLF 7 VRALN+F Sbjct: 2506 VRALNVF 2512>XP_006719866 Length = 2962 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VRALNLF 7 VRALN+F Sbjct: 2512 VRALNVF 2518>XP_005266405 Length = 2964 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VRALNLF 7 VRALN+F Sbjct: 2509 VRALNVF 2515>XP_005266404 Length = 2967 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VRALNLF 7 VRALN+F Sbjct: 2512 VRALNVF 2518>XP_005263433 Length = 2832 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VRALNLF 7 VRALN+F Sbjct: 2402 VRALNVF 2408>XP_005263432 Length = 2852 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VRALNLF 7 VRALN+F Sbjct: 2427 VRALNVF 2433>XP_005263431 Length = 2857 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VRALNLF 7 VRALN+F Sbjct: 2427 VRALNVF 2433>XP_006714492 Length = 2867 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VRALNLF 7 VRALN+F Sbjct: 2438 VRALNVF 2444>XP_005263430 Length = 2868 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VRALNLF 7 VRALN+F Sbjct: 2438 VRALNVF 2444>XP_005263429 Length = 2868 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VRALNLF 7 VRALN+F Sbjct: 2438 VRALNVF 2444>NP_001191126 Length = 739 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VRALNLF 7 VRALN+F Sbjct: 305 VRALNVF 311>NP_001157871 Length = 793 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RALNLFQV 9 R LNLF++ Sbjct: 125 RRLNLFEI 132>NP_653197 Length = 515 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VRALNLFQ 8 V ALNLF+ Sbjct: 275 VTALNLFK 282>NP_001275710 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VRALNLFQ 8 V ALNLF+ Sbjct: 291 VTALNLFK 298>NP_938051 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VRALNLFQ 8 V ALNLF+ Sbjct: 265 VTALNLFK 272>NP_938052 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VRALNLFQ 8 V ALNLF+ Sbjct: 235 VTALNLFK 242>NP_001275711 Length = 317 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VRALNLFQ 8 V ALNLF+ Sbjct: 77 VTALNLFK 84>NP_001275712 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VRALNLFQ 8 V ALNLF+ Sbjct: 36 VTALNLFK 43>XP_006721522 Length = 316 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LNLFQV 9 LNLFQ+ Sbjct: 264 LNLFQI 269>XP_006720100 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VRALNLFQ 8 V ALNLF+ Sbjct: 235 VTALNLFK 242>XP_006720099 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VRALNLFQ 8 V ALNLF+ Sbjct: 265 VTALNLFK 272>XP_006720098 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VRALNLFQ 8 V ALNLF+ Sbjct: 265 VTALNLFK 272>NP_653282 Length = 316 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LNLFQV 9 LNLFQ+ Sbjct: 264 LNLFQI 269>NP_001151733 Length = 242 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LNLFQV 9 LNLFQ+ Sbjct: 190 LNLFQI 195Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.344 0.149 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 305,140 Number of extensions: 386 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |