Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005148 20 390 NP_009297 20 390 NP_689777 18 1135 NP_060360 18 1135 XP_005250858 18 1135 XP_005250857 18 1135 NP_056142 18 1935 XP_006711311 18 1935 XP_005245106 18 1935 NP_976328 17 3301 NP_065169 16 5631 NP_056975 16 5631 NP_001070671 16 5631 NP_001269732 16 5631 NP_001269731 16 5631 NP_001269730 16 5631 NP_065705 16 5631 XP_006723898 16 5631 XP_006723897 16 5631 XP_005260524 16 5631 XP_006719020 16 5631 XP_006719019 16 5631 XP_005247719 16 5631 NP_997046 16 5631 NP_065391 16 7355 NP_001127812 16 7355 NP_115678 16 7355 XP_005261680 16 7355 XP_006715855 16 7355 NP_001124491 15 9605 NP_001229305 15 9605 NP_002046 15 9605 NP_002010 15 9605 NP_055999 15 9605 NP_001137854 15 9605 NP_001103132 15 9605 NP_653267 15 9605 NP_660281 15 9605 NP_579812 15 9605 NP_579803 15 9605 NP_065868 15 9605 NP_065811 15 9605 XP_005247738 15 9605 XP_005247737 15 9605 XP_006713778 15 9605 XP_006713136 15 9605 XP_006712712 15 9605 XP_006712711 15 9605 XP_006712710 15 9605 XP_006712709 15 9605 XP_006710939 15 9605 XP_005271228 15 9605 XP_006710938 15 9605 XP_006710937 15 9605 NP_579807 15 9605 NP_001991 15 9605 NP_579806 15 9605 NP_579805 15 9605 NP_579811 15 9605>NP_005148 Length = 1130 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VNSDVAKPS 9 VNSD AKPS Sbjct: 941 VNSDAAKPS 949>NP_009297 Length = 1149 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VNSDVAKPS 9 VNSD AKPS Sbjct: 960 VNSDAAKPS 968>NP_689777 Length = 3997 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 VNSDVAKPS 9 V+SDVAKP+ Sbjct: 1855 VDSDVAKPN 1863>NP_060360 Length = 4022 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 VNSDVAKPS 9 V+SDVAKP+ Sbjct: 1880 VDSDVAKPN 1888>XP_005250858 Length = 4022 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 VNSDVAKPS 9 V+SDVAKP+ Sbjct: 1880 VDSDVAKPN 1888>XP_005250857 Length = 4022 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 VNSDVAKPS 9 V+SDVAKP+ Sbjct: 1880 VDSDVAKPN 1888>NP_056142 Length = 1016 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VNSDVAKPS 9 VN DV KPS Sbjct: 608 VNGDVDKPS 616>XP_006711311 Length = 950 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VNSDVAKPS 9 VN DV KPS Sbjct: 542 VNGDVDKPS 550>XP_005245106 Length = 970 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 VNSDVAKPS 9 VN DV KPS Sbjct: 562 VNGDVDKPS 570>NP_976328 Length = 911 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NSDVAKPS 9 N+DV KPS Sbjct: 685 NTDVEKPS 692>NP_065169 Length = 1053 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNSDVAKPS 9 +++DV KPS Sbjct: 1023 ISADVEKPS 1031>NP_056975 Length = 579 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DVAKPS 9 DVAKPS Sbjct: 204 DVAKPS 209>NP_001070671 Length = 985 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSDVAKPS 9 N+D AKP+ Sbjct: 640 NTDAAKPT 647>NP_001269732 Length = 886 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSDVAKPS 9 N+D AKP+ Sbjct: 541 NTDAAKPT 548>NP_001269731 Length = 1017 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSDVAKPS 9 N+D AKP+ Sbjct: 672 NTDAAKPT 679>NP_001269730 Length = 984 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSDVAKPS 9 N+D AKP+ Sbjct: 639 NTDAAKPT 646>NP_065705 Length = 1050 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSDVAKPS 9 N+D AKP+ Sbjct: 705 NTDAAKPT 712>XP_006723898 Length = 951 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNSDVAKPS 9 +++DV KPS Sbjct: 921 ISADVEKPS 929>XP_006723897 Length = 951 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNSDVAKPS 9 +++DV KPS Sbjct: 921 ISADVEKPS 929>XP_005260524 Length = 951 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VNSDVAKPS 9 +++DV KPS Sbjct: 921 ISADVEKPS 929>XP_006719020 Length = 150 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NSDVAKPS 9 +SD AKPS Sbjct: 21 DSDFAKPS 28>XP_006719019 Length = 330 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NSDVAKPS 9 +SD AKPS Sbjct: 21 DSDFAKPS 28>XP_005247719 Length = 919 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSDVAKPS 9 N+D AKP+ Sbjct: 574 NTDAAKPT 581>NP_997046 Length = 547 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VNSDVAKP 8 VNSD +KP Sbjct: 156 VNSDNSKP 163>NP_065391 Length = 252 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSDVAKPS 9 NSD A+P+ Sbjct: 159 NSDTAEPT 166>NP_001127812 Length = 122 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VNSDVAKP 8 V SDV+KP Sbjct: 53 VASDVSKP 60>NP_115678 Length = 122 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VNSDVAKP 8 V SDV+KP Sbjct: 53 VASDVSKP 60>XP_005261680 Length = 303 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NSDVAKPS 9 NSD A+P+ Sbjct: 210 NSDTAEPT 217>XP_006715855 Length = 122 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VNSDVAKP 8 V SDV+KP Sbjct: 53 VASDVSKP 60>NP_001124491 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VNSDVAKP 8 V DVAKP Sbjct: 222 VELDVAKP 229>NP_001229305 Length = 438 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VNSDVAKP 8 V DVAKP Sbjct: 222 VELDVAKP 229>NP_002046 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VNSDVAKP 8 V DVAKP Sbjct: 222 VELDVAKP 229>NP_002010 Length = 1338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SDVAKPS 9 SDV++PS Sbjct: 1285 SDVSRPS 1291>NP_055999 Length = 1001 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NSDVAKP 8 N+DV KP Sbjct: 978 NADVQKP 984>NP_001137854 Length = 1127 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NSDVAKP 8 N+DV KP Sbjct: 1104 NADVQKP 1110>NP_001103132 Length = 4284 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VNSDVAKPS 9 VNS + KPS Sbjct: 1319 VNSLIQKPS 1327>NP_653267 Length = 4753 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SDVAKPS 9 SDVA+P+ Sbjct: 3974 SDVARPA 3980>NP_660281 Length = 1043 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 NSDVAKPS 9 N D KPS Sbjct: 608 NEDAVKPS 615>NP_579812 Length = 253 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSDVAKPS 9 ++DVA+PS Sbjct: 226 SADVAEPS 233>NP_579803 Length = 265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSDVAKPS 9 ++DVA+PS Sbjct: 238 SADVAEPS 245>NP_065868 Length = 936 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VNSDVAKP 8 VNS VA P Sbjct: 622 VNSPVASP 629>NP_065811 Length = 1572 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VNSDVAKPS 9 VN D+ PS Sbjct: 344 VNGDLGSPS 352>XP_005247738 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VNSDVAKP 8 VNS VA P Sbjct: 301 VNSPVASP 308>XP_005247737 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VNSDVAKP 8 VNS VA P Sbjct: 600 VNSPVASP 607>XP_006713778 Length = 923 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VNSDVAKP 8 VNS VA P Sbjct: 609 VNSPVASP 616>XP_006713136 Length = 1022 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NSDVAKP 8 N+DV KP Sbjct: 999 NADVQKP 1005>XP_006712712 Length = 1414 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VNSDVAKPS 9 VN D+ PS Sbjct: 186 VNGDLGSPS 194>XP_006712711 Length = 1448 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VNSDVAKPS 9 VN D+ PS Sbjct: 220 VNGDLGSPS 228>XP_006712710 Length = 1528 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VNSDVAKPS 9 VN D+ PS Sbjct: 351 VNGDLGSPS 359>XP_006712709 Length = 1579 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VNSDVAKPS 9 VN D+ PS Sbjct: 351 VNGDLGSPS 359>XP_006710939 Length = 989 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 NSDVAKPS 9 N D KPS Sbjct: 554 NEDAVKPS 561>XP_005271228 Length = 1042 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 NSDVAKPS 9 N D KPS Sbjct: 607 NEDAVKPS 614>XP_006710938 Length = 1043 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 NSDVAKPS 9 N D KPS Sbjct: 608 NEDAVKPS 615>XP_006710937 Length = 1043 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 NSDVAKPS 9 N D KPS Sbjct: 608 NEDAVKPS 615>NP_579807 Length = 179 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSDVAKPS 9 ++DVA+PS Sbjct: 152 SADVAEPS 159>NP_001991 Length = 287 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSDVAKPS 9 ++DVA+PS Sbjct: 260 SADVAEPS 267>NP_579806 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSDVAKPS 9 ++DVA+PS Sbjct: 248 SADVAEPS 255>NP_579805 Length = 191 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSDVAKPS 9 ++DVA+PS Sbjct: 164 SADVAEPS 171>NP_579811 Length = 178 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NSDVAKPS 9 ++DVA+PS Sbjct: 151 SADVAEPS 158Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.294 0.112 0.286 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 664,585 Number of extensions: 1108 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |