Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 20 299 NP_001263689 20 299 NP_001119584 20 299 NP_001119586 20 299 NP_001263625 20 299 NP_001119590 20 299 NP_001263690 20 299 NP_001119585 20 299 NP_001263624 20 299 NP_001119588 20 299 NP_001119587 20 299 NP_001119589 20 299 NP_001263627 20 299 NP_001263628 20 299 NP_001263626 20 299 NP_002903 17 2528 NP_001273361 17 2528 NP_001273360 17 2528 NP_009089 17 2528 NP_001007554 17 2528 NP_001229820 17 2528 NP_001123995 17 2528 NP_001229822 17 2528 NP_001229821 17 2528 XP_005267148 17 2528 XP_005267147 17 2528 XP_006715607 17 2528 XP_006715606 17 2528 NP_620154 17 4312 NP_001069 16 5631 NP_001186763 16 5631 NP_542413 16 5631 NP_859078 16 5631 NP_061092 16 7355 XP_005254211 16 7355 XP_005254210 16 7355 XP_006720446 16 7355 XP_005254209 16 7355 XP_005254208 16 7355 XP_005247644 16 7355 XP_005247643 16 7355 XP_005247641 16 7355 XP_005247640 16 7355 XP_005247639 16 7355 NP_003983 16 7355 NP_001123500 16 7355 NP_006185 15 9605 NP_055786 15 9605 NP_005214 15 9605 NP_778253 15 9605 NP_001238774 15 9605 NP_004873 15 9605 NP_065881 15 9605 NP_003295 15 9605 XP_006720917 15 9605 XP_005255206 15 9605 XP_005255205 15 9605 XP_006720916 15 9605 XP_006720915 15 9605 XP_006720218 15 9605 XP_005247797 15 9605 NP_055632 15 9605>NP_000537 Length = 393 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NLLGRNSF 9 NLLGRNSF Sbjct: 263 NLLGRNSF 270>NP_001263689 Length = 354 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NLLGRNSF 9 NLLGRNSF Sbjct: 224 NLLGRNSF 231>NP_001119584 Length = 393 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NLLGRNSF 9 NLLGRNSF Sbjct: 263 NLLGRNSF 270>NP_001119586 Length = 341 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NLLGRNSF 9 NLLGRNSF Sbjct: 263 NLLGRNSF 270>NP_001263625 Length = 302 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NLLGRNSF 9 NLLGRNSF Sbjct: 224 NLLGRNSF 231>NP_001119590 Length = 354 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NLLGRNSF 9 NLLGRNSF Sbjct: 224 NLLGRNSF 231>NP_001263690 Length = 354 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NLLGRNSF 9 NLLGRNSF Sbjct: 224 NLLGRNSF 231>NP_001119585 Length = 346 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NLLGRNSF 9 NLLGRNSF Sbjct: 263 NLLGRNSF 270>NP_001263624 Length = 307 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NLLGRNSF 9 NLLGRNSF Sbjct: 224 NLLGRNSF 231>NP_001119588 Length = 209 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NLLGRNSF 9 NLLGRNSF Sbjct: 131 NLLGRNSF 138>NP_001119587 Length = 261 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NLLGRNSF 9 NLLGRNSF Sbjct: 131 NLLGRNSF 138>NP_001119589 Length = 214 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NLLGRNSF 9 NLLGRNSF Sbjct: 131 NLLGRNSF 138>NP_001263627 Length = 182 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NLLGRNSF 9 NLLGRNSF Sbjct: 104 NLLGRNSF 111>NP_001263628 Length = 187 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NLLGRNSF 9 NLLGRNSF Sbjct: 104 NLLGRNSF 111>NP_001263626 Length = 234 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NLLGRNSF 9 NLLGRNSF Sbjct: 104 NLLGRNSF 111>NP_002903 Length = 3130 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLLGRNSF 9 N LG+NSF Sbjct: 700 NTLGKNSF 707>NP_001273361 Length = 3052 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLLGRNSF 9 N LG+NSF Sbjct: 622 NTLGKNSF 629>NP_001273360 Length = 3052 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLLGRNSF 9 N LG+NSF Sbjct: 622 NTLGKNSF 629>NP_009089 Length = 767 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VNLLGRNS 8 V LLGRNS Sbjct: 476 VRLLGRNS 483>NP_001007554 Length = 798 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VNLLGRNS 8 V LLGRNS Sbjct: 507 VRLLGRNS 514>NP_001229820 Length = 844 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VNLLGRNS 8 V LLGRNS Sbjct: 553 VRLLGRNS 560>NP_001123995 Length = 813 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VNLLGRNS 8 V LLGRNS Sbjct: 522 VRLLGRNS 529>NP_001229822 Length = 767 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VNLLGRNS 8 V LLGRNS Sbjct: 476 VRLLGRNS 483>NP_001229821 Length = 798 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VNLLGRNS 8 V LLGRNS Sbjct: 507 VRLLGRNS 514>XP_005267148 Length = 2679 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLLGRNSF 9 N LG+NSF Sbjct: 700 NTLGKNSF 707>XP_005267147 Length = 2689 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLLGRNSF 9 N LG+NSF Sbjct: 700 NTLGKNSF 707>XP_006715607 Length = 3052 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLLGRNSF 9 N LG+NSF Sbjct: 622 NTLGKNSF 629>XP_006715606 Length = 3130 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLLGRNSF 9 N LG+NSF Sbjct: 700 NTLGKNSF 707>NP_620154 Length = 520 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLLGRNSF 9 N LG+NSF Sbjct: 491 NSLGQNSF 498>NP_001069 Length = 739 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VNLLGRN 7 VNL+G+N Sbjct: 294 VNLIGKN 300>NP_001186763 Length = 677 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VNLLGRN 7 VNL+G+N Sbjct: 232 VNLIGKN 238>NP_542413 Length = 647 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VNLLGRN 7 VNL+G+N Sbjct: 294 VNLIGKN 300>NP_859078 Length = 190 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VNLLGRNS 8 +NLLGR S Sbjct: 99 INLLGRPS 106>NP_061092 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VNLLGRNSF 9 VN+LG+ F Sbjct: 237 VNILGQEQF 245>XP_005254211 Length = 269 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLGRNSF 9 LLG+N+F Sbjct: 17 LLGKNTF 23>XP_005254210 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLGRNSF 9 LLG+N+F Sbjct: 238 LLGKNTF 244>XP_006720446 Length = 504 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLGRNSF 9 LLG+N+F Sbjct: 252 LLGKNTF 258>XP_005254209 Length = 504 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLGRNSF 9 LLG+N+F Sbjct: 252 LLGKNTF 258>XP_005254208 Length = 652 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLGRNSF 9 LLG+N+F Sbjct: 400 LLGKNTF 406>XP_005247644 Length = 188 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VNLLGRNSF 9 VN+LG+ F Sbjct: 46 VNILGQEQF 54>XP_005247643 Length = 203 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VNLLGRNSF 9 VN+LG+ F Sbjct: 46 VNILGQEQF 54>XP_005247641 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VNLLGRNSF 9 VN+LG+ F Sbjct: 237 VNILGQEQF 245>XP_005247640 Length = 360 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VNLLGRNSF 9 VN+LG+ F Sbjct: 237 VNILGQEQF 245>XP_005247639 Length = 394 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VNLLGRNSF 9 VN+LG+ F Sbjct: 237 VNILGQEQF 245>NP_003983 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLGRNSF 9 LLG+N+F Sbjct: 238 LLGKNTF 244>NP_001123500 Length = 638 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLGRNSF 9 LLG+N+F Sbjct: 386 LLGKNTF 392>NP_006185 Length = 341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LGRNSF 9 LGRN+F Sbjct: 228 LGRNNF 233>NP_055786 Length = 817 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VNLLGRNSF 9 + +LG NSF Sbjct: 114 LQILGTNSF 122>NP_005214 Length = 282 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LGRNSF 9 LGRNS+ Sbjct: 93 LGRNSY 98>NP_778253 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 VNLLGRNS 8 +NL+GR++ Sbjct: 72 INLMGRST 79>NP_001238774 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VNLLGRNS 8 V++LGRN+ Sbjct: 80 VDVLGRNA 87>NP_004873 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NLLGRN 7 N+LGRN Sbjct: 184 NVLGRN 189>NP_065881 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NLLGRNSF 9 N+LGR+ F Sbjct: 147 NMLGRHFF 154>NP_003295 Length = 759 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VNLLGRNS 8 V++LGRN+ Sbjct: 80 VDVLGRNA 87>XP_006720917 Length = 213 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LGRNSF 9 LGRNS+ Sbjct: 24 LGRNSY 29>XP_005255206 Length = 213 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LGRNSF 9 LGRNS+ Sbjct: 24 LGRNSY 29>XP_005255205 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LGRNSF 9 LGRNS+ Sbjct: 93 LGRNSY 98>XP_006720916 Length = 282 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LGRNSF 9 LGRNS+ Sbjct: 93 LGRNSY 98>XP_006720915 Length = 282 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LGRNSF 9 LGRNS+ Sbjct: 93 LGRNSY 98>XP_006720218 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LGRNSF 9 LGRN+F Sbjct: 228 LGRNNF 233>XP_005247797 Length = 539 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VNLLGRNS 8 V++LGRN+ Sbjct: 80 VDVLGRNA 87>NP_055632 Length = 811 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VNLLGRNSF 9 + LG+N+F Sbjct: 191 IRFLGKNAF 199Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.145 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 564,804 Number of extensions: 1132 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |