Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005219 20 299 NP_001036064 19 869 NP_005226 19 869 XP_005246434 19 869 XP_005246433 19 869 XP_005246432 19 869 XP_006712427 19 869 NP_001276866 17 2528 NP_004439 17 2528 NP_001276865 17 2528 NP_001005862 17 2528 NP_005384 17 2528 NP_001156729 17 2528 XP_005257197 17 2528 XP_006721828 17 2528 NP_001094 17 3301 NP_001265272 17 3301 NP_060570 17 3301 NP_001165891 17 3301 NP_072097 17 4312 NP_001258625 16 5631 NP_001258627 16 5631 NP_004290 16 5631 NP_001258628 16 5631 NP_001258626 16 5631 NP_001138870 16 5631 NP_003207 16 5631 NP_001277251 16 7355 NP_005500 16 7355 NP_001277250 16 7355 NP_851853 16 7355 XP_005271970 16 7355 XP_005271969 16 7355 XP_005271967 16 7355 XP_005271966 16 7355 NP_001259004 15 9605 NP_005144 15 9605 NP_001228 15 9605 NP_057427 15 9605 NP_055970 15 9605 NP_061027 15 9605 NP_714921 15 9605 XP_006721395 15 9605 XP_006721394 15 9605 XP_006721393 15 9605 XP_006717499 15 9605 XP_005252492 15 9605 XP_005252490 15 9605 XP_005252489 15 9605 XP_005252488 15 9605>NP_005219 Length = 1210 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VMDADEYLI 9 V+DADEYLI Sbjct: 1010 VVDADEYLI 1018>NP_001036064 Length = 1292 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VMDADEYLI 9 +MDA+EYL+ Sbjct: 1016 MMDAEEYLV 1024>NP_005226 Length = 1308 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VMDADEYLI 9 +MDA+EYL+ Sbjct: 1016 MMDAEEYLV 1024>XP_005246434 Length = 1282 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VMDADEYLI 9 +MDA+EYL+ Sbjct: 1006 MMDAEEYLV 1014>XP_005246433 Length = 1298 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VMDADEYLI 9 +MDA+EYL+ Sbjct: 1006 MMDAEEYLV 1014>XP_005246432 Length = 1307 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VMDADEYLI 9 +MDA+EYL+ Sbjct: 1031 MMDAEEYLV 1039>XP_006712427 Length = 1323 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 VMDADEYLI 9 +MDA+EYL+ Sbjct: 1031 MMDAEEYLV 1039>NP_001276866 Length = 1055 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VMDADEYLI 9 ++DA+EYL+ Sbjct: 1017 LVDAEEYLV 1025>NP_004439 Length = 1255 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VMDADEYLI 9 ++DA+EYL+ Sbjct: 1017 LVDAEEYLV 1025>NP_001276865 Length = 1240 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VMDADEYLI 9 ++DA+EYL+ Sbjct: 1002 LVDAEEYLV 1010>NP_001005862 Length = 1225 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VMDADEYLI 9 ++DA+EYL+ Sbjct: 987 LVDAEEYLV 995>NP_005384 Length = 1909 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VMDADEY 7 ++DADEY Sbjct: 553 ILDADEY 559>NP_001156729 Length = 1932 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VMDADEY 7 ++DADEY Sbjct: 576 ILDADEY 582>XP_005257197 Length = 1225 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VMDADEYLI 9 ++DA+EYL+ Sbjct: 987 LVDAEEYLV 995>XP_006721828 Length = 1336 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VMDADEYLI 9 ++DA+EYL+ Sbjct: 1098 LVDAEEYLV 1106>NP_001094 Length = 894 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VMDADEYLI 9 V D DEY+I Sbjct: 13 VYDEDEYMI 21>NP_001265272 Length = 894 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VMDADEYLI 9 V D DEY+I Sbjct: 13 VYDEDEYMI 21>NP_060570 Length = 640 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VMDADEYLI 9 ++D DEY++ Sbjct: 505 ILDTDEYVL 513>NP_001165891 Length = 621 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VMDADEYLI 9 ++D DEY++ Sbjct: 486 ILDTDEYVL 494>NP_072097 Length = 839 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VMDADEYLI 9 V+D D YL+ Sbjct: 302 VLDEDSYLV 310>NP_001258625 Length = 752 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VMDADEYLI 9 V+DADE ++ Sbjct: 670 VVDADEIIV 678>NP_001258627 Length = 726 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VMDADEYLI 9 V+DADE ++ Sbjct: 644 VVDADEIIV 652>NP_004290 Length = 753 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VMDADEYLI 9 V+DADE ++ Sbjct: 671 VVDADEIIV 679>NP_001258628 Length = 713 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VMDADEYLI 9 V+DADE ++ Sbjct: 631 VVDADEIIV 639>NP_001258626 Length = 712 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VMDADEYLI 9 V+DADE ++ Sbjct: 630 VVDADEIIV 638>NP_001138870 Length = 273 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MDADEYLI 9 MD DE+L+ Sbjct: 69 MDLDEFLL 76>NP_003207 Length = 303 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MDADEYLI 9 MD DE+L+ Sbjct: 99 MDLDEFLL 106>NP_001277251 Length = 2854 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VMDADEYL 8 ++DAD YL Sbjct: 2631 IVDADGYL 2638>NP_005500 Length = 3027 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VMDADEYL 8 ++DAD YL Sbjct: 2804 IVDADGYL 2811>NP_001277250 Length = 3048 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VMDADEYL 8 ++DAD YL Sbjct: 2825 IVDADGYL 2832>NP_851853 Length = 503 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VMDADEYL 8 VM+A EY+ Sbjct: 302 VMEAQEYI 309>XP_005271970 Length = 2931 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VMDADEYL 8 ++DAD YL Sbjct: 2863 IVDADGYL 2870>XP_005271969 Length = 3020 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VMDADEYL 8 ++DAD YL Sbjct: 2797 IVDADGYL 2804>XP_005271967 Length = 3065 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VMDADEYL 8 ++DAD YL Sbjct: 2842 IVDADGYL 2849>XP_005271966 Length = 3086 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VMDADEYL 8 ++DAD YL Sbjct: 2863 IVDADGYL 2870>NP_001259004 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DADEYL 8 DA+EYL Sbjct: 527 DAEEYL 532>NP_005144 Length = 798 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DADEYL 8 DA+EYL Sbjct: 523 DAEEYL 528>NP_001228 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VMDADEYL 8 ++DAD YL Sbjct: 341 LIDADPYL 348>NP_057427 Length = 3114 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DADEYL 8 +ADEYL Sbjct: 2856 EADEYL 2861>NP_055970 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 MDADEYL 8 MD+D+Y+ Sbjct: 183 MDSDQYV 189>NP_061027 Length = 4599 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ADEYLI 9 ADEY+I Sbjct: 545 ADEYMI 550>NP_714921 Length = 680 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VMDADEYL 8 V+DA EYL Sbjct: 141 VLDALEYL 148>XP_006721395 Length = 602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DADEYL 8 DA+EYL Sbjct: 327 DAEEYL 332>XP_006721394 Length = 715 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DADEYL 8 DA+EYL Sbjct: 528 DAEEYL 533>XP_006721393 Length = 781 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DADEYL 8 DA+EYL Sbjct: 528 DAEEYL 533>XP_006717499 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 MDADEYL 8 MD+D+Y+ Sbjct: 26 MDSDQYV 32>XP_005252492 Length = 650 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 MDADEYL 8 MD+D+Y+ Sbjct: 60 MDSDQYV 66>XP_005252490 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 MDADEYL 8 MD+D+Y+ Sbjct: 206 MDSDQYV 212>XP_005252489 Length = 773 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 MDADEYL 8 MD+D+Y+ Sbjct: 183 MDSDQYV 189>XP_005252488 Length = 796 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 MDADEYL 8 MD+D+Y+ Sbjct: 206 MDSDQYV 212Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.144 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 635,250 Number of extensions: 1283 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |