Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005219 21 229 NP_954714 18 1482 NP_001078945 18 1482 NP_001119806 18 1482 NP_954586 18 1482 NP_036415 18 1935 NP_001036064 17 2528 NP_005226 17 2528 NP_598328 17 2528 NP_003169 17 2528 XP_006713374 17 2528 XP_005246434 17 2528 XP_005246433 17 2528 XP_005246432 17 2528 XP_006712427 17 2528 NP_598006 17 3301 NP_008881 17 3301 NP_776256 17 3301 NP_036514 17 4312 XP_006714525 17 4312 NP_997188 16 5631 NP_001032900 16 5631 NP_001124296 16 5631 NP_004484 16 5631 XP_006723400 16 5631 XP_005259240 16 5631 NP_001124297 16 5631 NP_003160 16 5631 NP_001104490 16 5631 NP_036316 16 5631 NP_004590 16 7355 NP_001243779 16 7355 NP_596869 16 7355 NP_001180380 16 7355 XP_006724373 16 7355 XP_005253558 16 7355 XP_005253557 16 7355 XP_006719219 16 7355 XP_005253556 16 7355 XP_005253555 16 7355 XP_006712787 16 7355 XP_006712786 16 7355 NP_001254479 16 7355 NP_003032 15 9605 NP_060356 15 9605 NP_110407 15 9605 NP_542141 15 9605 XP_005260338 15 9605 XP_006721136 15 9605 XP_006721135 15 9605 XP_005251691 15 9605 XP_005248904 15 9605 XP_005265319 15 9605 XP_006713278 15 9605 XP_005265318 15 9605 NP_055687 15 9605 NP_598377 15 9605 NP_612639 15 9605 NP_776159 15 9605>NP_005219 Length = 1210 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VMAIVDNPH 9 VMA VDNPH Sbjct: 765 VMASVDNPH 773>NP_954714 Length = 416 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MAIVDNPH 9 MAI+ NPH Sbjct: 119 MAILQNPH 126>NP_001078945 Length = 417 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MAIVDNPH 9 MAI+ NPH Sbjct: 119 MAILQNPH 126>NP_001119806 Length = 416 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MAIVDNPH 9 MAI+ NPH Sbjct: 119 MAILQNPH 126>NP_954586 Length = 417 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MAIVDNPH 9 MAI+ NPH Sbjct: 119 MAILQNPH 126>NP_036415 Length = 466 Score = 17.7 bits (34), Expect = 1935 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IVDNPH 9 +VDNPH Sbjct: 166 VVDNPH 171>NP_001036064 Length = 1292 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VMAIVDNPH 9 +MA +D+PH Sbjct: 771 IMASMDHPH 779>NP_005226 Length = 1308 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VMAIVDNPH 9 +MA +D+PH Sbjct: 771 IMASMDHPH 779>NP_598328 Length = 582 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VMAIVDNPH 9 V+ +VD PH Sbjct: 115 VLLVVDEPH 123>NP_003169 Length = 478 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VMAIVDNPH 9 V+ +VD PH Sbjct: 115 VLLVVDEPH 123>XP_006713374 Length = 511 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VMAIVDNPH 9 V+ +VD PH Sbjct: 115 VLLVVDEPH 123>XP_005246434 Length = 1282 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VMAIVDNPH 9 +MA +D+PH Sbjct: 761 IMASMDHPH 769>XP_005246433 Length = 1298 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VMAIVDNPH 9 +MA +D+PH Sbjct: 761 IMASMDHPH 769>XP_005246432 Length = 1307 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VMAIVDNPH 9 +MA +D+PH Sbjct: 786 IMASMDHPH 794>XP_006712427 Length = 1323 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VMAIVDNPH 9 +MA +D+PH Sbjct: 786 IMASMDHPH 794>NP_598006 Length = 669 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VMAIVDNPH 9 V+ ++D PH Sbjct: 115 VLLVIDEPH 123>NP_008881 Length = 705 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 VMAIVDNPH 9 V+ ++D PH Sbjct: 115 VLLVIDEPH 123>NP_776256 Length = 301 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MAIVDNPH 9 MA++DNP+ Sbjct: 256 MALLDNPN 263>NP_036514 Length = 262 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 MAIVDNPH 9 MA+ NPH Sbjct: 118 MAVQQNPH 125>XP_006714525 Length = 159 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 MAIVDNPH 9 MA+ NPH Sbjct: 15 MAVQQNPH 22>NP_997188 Length = 439 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MAIVDNPH 9 MAI+ +PH Sbjct: 115 MAILQSPH 122>NP_001032900 Length = 252 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VMAIVDNP 8 V AI++NP Sbjct: 228 VQAIIENP 235>NP_001124296 Length = 1087 Score = 16.2 bits (30), Expect = 5631 Identities = 3/9 (33%), Positives = 7/9 (77%) Query: 1 VMAIVDNPH 9 ++ ++D PH Sbjct: 599 IVKVIDGPH 607>NP_004484 Length = 261 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VMAIVDNP 8 V AI++NP Sbjct: 237 VQAIIENP 244>XP_006723400 Length = 1083 Score = 16.2 bits (30), Expect = 5631 Identities = 3/9 (33%), Positives = 7/9 (77%) Query: 1 VMAIVDNPH 9 ++ ++D PH Sbjct: 595 IVKVIDGPH 603>XP_005259240 Length = 1087 Score = 16.2 bits (30), Expect = 5631 Identities = 3/9 (33%), Positives = 7/9 (77%) Query: 1 VMAIVDNPH 9 ++ ++D PH Sbjct: 599 IVKVIDGPH 607>NP_001124297 Length = 1083 Score = 16.2 bits (30), Expect = 5631 Identities = 3/9 (33%), Positives = 7/9 (77%) Query: 1 VMAIVDNPH 9 ++ ++D PH Sbjct: 595 IVKVIDGPH 603>NP_003160 Length = 1087 Score = 16.2 bits (30), Expect = 5631 Identities = 3/9 (33%), Positives = 7/9 (77%) Query: 1 VMAIVDNPH 9 ++ ++D PH Sbjct: 599 IVKVIDGPH 607>NP_001104490 Length = 1087 Score = 16.2 bits (30), Expect = 5631 Identities = 3/9 (33%), Positives = 7/9 (77%) Query: 1 VMAIVDNPH 9 ++ ++D PH Sbjct: 599 IVKVIDGPH 607>NP_036316 Length = 408 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MAIVDNPH 9 MAI+ +PH Sbjct: 118 MAILQSPH 125>NP_004590 Length = 1141 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VMAIVDNP 8 VMA V NP Sbjct: 265 VMAAVQNP 272>NP_001243779 Length = 34350 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 MAIVDNPH 9 + I+D PH Sbjct: 4565 LIIIDKPH 4572>NP_596869 Length = 33423 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 MAIVDNPH 9 + I+D PH Sbjct: 3638 LIIIDKPH 3645>NP_001180380 Length = 882 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VMAIVDNP 8 V AIV+NP Sbjct: 54 VWAIVNNP 61>XP_006724373 Length = 1111 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VMAIVDNP 8 VMA V NP Sbjct: 235 VMAAVQNP 242>XP_005253558 Length = 897 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VMAIVDNP 8 V AIV+NP Sbjct: 54 VWAIVNNP 61>XP_005253557 Length = 904 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VMAIVDNP 8 V AIV+NP Sbjct: 54 VWAIVNNP 61>XP_006719219 Length = 910 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VMAIVDNP 8 V AIV+NP Sbjct: 54 VWAIVNNP 61>XP_005253556 Length = 944 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VMAIVDNP 8 V AIV+NP Sbjct: 54 VWAIVNNP 61>XP_005253555 Length = 966 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VMAIVDNP 8 V AIV+NP Sbjct: 54 VWAIVNNP 61>XP_006712787 Length = 33978 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 MAIVDNPH 9 + I+D PH Sbjct: 4566 LIIIDKPH 4573>XP_006712786 Length = 35484 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 MAIVDNPH 9 + I+D PH Sbjct: 4566 LIIIDKPH 4573>NP_001254479 Length = 35991 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 MAIVDNPH 9 + I+D PH Sbjct: 4882 LIIIDKPH 4889>NP_003032 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 AIVDNP 8 A++DNP Sbjct: 18 ALIDNP 23>NP_060356 Length = 1275 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VMAIVDNP 8 V I+DNP Sbjct: 421 VTPIIDNP 428>NP_110407 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 AIVDNPH 9 A+V++PH Sbjct: 154 AVVNSPH 160>NP_542141 Length = 249 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 VMAIVDNP 8 + +VDNP Sbjct: 232 IQQVVDNP 239>XP_005260338 Length = 249 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 VMAIVDNP 8 + +VDNP Sbjct: 232 IQQVVDNP 239>XP_006721136 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 AIVDNP 8 A++DNP Sbjct: 6 ALIDNP 11>XP_006721135 Length = 698 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 AIVDNP 8 A++DNP Sbjct: 18 ALIDNP 23>XP_005251691 Length = 677 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 MAIVDNP 8 + IVDNP Sbjct: 238 LKIVDNP 244>XP_005248904 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 IVDNPH 9 I+DNP+ Sbjct: 226 IIDNPY 231>XP_005265319 Length = 897 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VMAIVDNP 8 V I+DNP Sbjct: 421 VTPIIDNP 428>XP_006713278 Length = 1156 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VMAIVDNP 8 V I+DNP Sbjct: 302 VTPIIDNP 309>XP_005265318 Length = 1274 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VMAIVDNP 8 V I+DNP Sbjct: 420 VTPIIDNP 427>NP_055687 Length = 677 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 MAIVDNP 8 + IVDNP Sbjct: 238 LKIVDNP 244>NP_598377 Length = 1207 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 MAIVDNPH 9 MAI +PH Sbjct: 263 MAITGHPH 270>NP_612639 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 IVDNPH 9 I+DNP+ Sbjct: 289 IIDNPY 294>NP_776159 Length = 402 Score = 15.4 bits (28), Expect = 9605 Identities = 3/6 (50%), Positives = 6/6 (100%) Query: 4 IVDNPH 9 ++D+PH Sbjct: 307 VIDSPH 312Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.137 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 539,550 Number of extensions: 502 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |