Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 19 665 NP_001263689 19 665 NP_001119584 19 665 NP_001119586 19 665 NP_001263625 19 665 NP_001119590 19 665 NP_001263690 19 665 NP_001119585 19 665 NP_001263624 19 665 NP_004225 17 2528 XP_005259469 17 2528 NP_001138552 16 5631 XP_005257293 16 5631 NP_001439 16 7355 NP_055587 16 7355 NP_001135869 16 7355 NP_689976 16 7355 NP_061836 16 7355 NP_387505 16 7355 XP_005261051 16 7355 XP_006722652 16 7355 XP_006722651 16 7355 XP_006722650 16 7355 XP_006722649 16 7355 XP_006722648 16 7355 XP_006722647 16 7355 XP_006722646 16 7355 XP_005258449 16 7355 NP_937762 15 9605 NP_001121190 15 9605 NP_001171134 15 9605 NP_000218 15 9605 NP_060621 15 9605 NP_001121189 15 9605 NP_001171136 15 9605 NP_998769 15 9605 XP_006722801 15 9605 XP_006722800 15 9605 XP_005259606 15 9605 XP_006712674 15 9605 XP_006712673 15 9605 XP_006712672 15 9605 XP_005246722 15 9605 NP_001171135 15 9605>NP_000537 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VLSQKTYQG 9 V SQKTYQG Sbjct: 97 VPSQKTYQG 105>NP_001263689 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VLSQKTYQG 9 V SQKTYQG Sbjct: 58 VPSQKTYQG 66>NP_001119584 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VLSQKTYQG 9 V SQKTYQG Sbjct: 97 VPSQKTYQG 105>NP_001119586 Length = 341 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VLSQKTYQG 9 V SQKTYQG Sbjct: 97 VPSQKTYQG 105>NP_001263625 Length = 302 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VLSQKTYQG 9 V SQKTYQG Sbjct: 58 VPSQKTYQG 66>NP_001119590 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VLSQKTYQG 9 V SQKTYQG Sbjct: 58 VPSQKTYQG 66>NP_001263690 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VLSQKTYQG 9 V SQKTYQG Sbjct: 58 VPSQKTYQG 66>NP_001119585 Length = 346 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VLSQKTYQG 9 V SQKTYQG Sbjct: 97 VPSQKTYQG 105>NP_001263624 Length = 307 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VLSQKTYQG 9 V SQKTYQG Sbjct: 58 VPSQKTYQG 66>NP_004225 Length = 738 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QKTYQG 9 QKTYQG Sbjct: 260 QKTYQG 265>XP_005259469 Length = 734 Score = 17.3 bits (33), Expect = 2528 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QKTYQG 9 QKTYQG Sbjct: 256 QKTYQG 261>NP_001138552 Length = 952 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LSQKTYQ 8 LSQ TYQ Sbjct: 629 LSQNTYQ 635>XP_005257293 Length = 920 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LSQKTYQ 8 LSQ TYQ Sbjct: 629 LSQNTYQ 635>NP_001439 Length = 556 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LSQKTYQG 9 +SQK +QG Sbjct: 333 VSQKVFQG 340>NP_055587 Length = 598 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QKTYQG 9 QK+YQG Sbjct: 224 QKSYQG 229>NP_001135869 Length = 600 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QKTYQG 9 QK+YQG Sbjct: 224 QKSYQG 229>NP_689976 Length = 836 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QKTYQG 9 QK+YQG Sbjct: 225 QKSYQG 230>NP_061836 Length = 2320 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLSQKTYQ 8 VLSQ+ YQ Sbjct: 1086 VLSQEPYQ 1093>NP_387505 Length = 2269 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLSQKTYQ 8 VLSQ+ YQ Sbjct: 1086 VLSQEPYQ 1093>XP_005261051 Length = 2242 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLSQKTYQ 8 VLSQ+ YQ Sbjct: 1008 VLSQEPYQ 1015>XP_006722652 Length = 600 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QKTYQG 9 QK+YQG Sbjct: 224 QKSYQG 229>XP_006722651 Length = 600 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QKTYQG 9 QK+YQG Sbjct: 224 QKSYQG 229>XP_006722650 Length = 600 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QKTYQG 9 QK+YQG Sbjct: 224 QKSYQG 229>XP_006722649 Length = 614 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QKTYQG 9 QK+YQG Sbjct: 240 QKSYQG 245>XP_006722648 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QKTYQG 9 QK+YQG Sbjct: 240 QKSYQG 245>XP_006722647 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QKTYQG 9 QK+YQG Sbjct: 240 QKSYQG 245>XP_006722646 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QKTYQG 9 QK+YQG Sbjct: 240 QKSYQG 245>XP_005258449 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QKTYQG 9 QK+YQG Sbjct: 240 QKSYQG 245>NP_937762 Length = 3333 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QKTYQG 9 QKT+QG Sbjct: 2010 QKTHQG 2015>NP_001121190 Length = 1668 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QKTYQG 9 QKT+QG Sbjct: 345 QKTHQG 350>NP_001171134 Length = 2446 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LSQKTYQ 8 LS+KT+Q Sbjct: 1708 LSEKTFQ 1714>NP_000218 Length = 1724 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QKTYQG 9 QKT+QG Sbjct: 401 QKTHQG 406>NP_060621 Length = 2472 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LSQKTYQ 8 LS+KT+Q Sbjct: 1708 LSEKTFQ 1714>NP_001121189 Length = 3277 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QKTYQG 9 QKT+QG Sbjct: 1954 QKTHQG 1959>NP_001171136 Length = 2446 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LSQKTYQ 8 LS+KT+Q Sbjct: 1708 LSEKTFQ 1714>NP_998769 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SQKTYQ 8 +QKTYQ Sbjct: 109 TQKTYQ 114>XP_006722801 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SQKTYQ 8 +QKTYQ Sbjct: 119 TQKTYQ 124>XP_006722800 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SQKTYQ 8 +QKTYQ Sbjct: 119 TQKTYQ 124>XP_005259606 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SQKTYQ 8 +QKTYQ Sbjct: 119 TQKTYQ 124>XP_006712674 Length = 2436 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LSQKTYQ 8 LS+KT+Q Sbjct: 1672 LSEKTFQ 1678>XP_006712673 Length = 2441 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LSQKTYQ 8 LS+KT+Q Sbjct: 1677 LSEKTFQ 1683>XP_006712672 Length = 2443 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LSQKTYQ 8 LS+KT+Q Sbjct: 1679 LSEKTFQ 1685>XP_005246722 Length = 2472 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LSQKTYQ 8 LS+KT+Q Sbjct: 1708 LSEKTFQ 1714>NP_001171135 Length = 2446 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LSQKTYQ 8 LS+KT+Q Sbjct: 1708 LSEKTFQ 1714Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.123 0.322 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 502,082 Number of extensions: 751 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |