Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 509 XP_006718908 20 509 XP_005271621 20 509 XP_006718907 20 509 XP_006718906 20 509 XP_005271619 20 509 XP_005271618 20 509 NP_055722 19 869 NP_001192244 18 1935 NP_078912 18 1935 NP_001273206 17 4312 NP_001273207 17 4312 NP_001273208 17 4312 NP_006313 17 4312 XP_005268350 17 4312 NP_001092010 16 5631 NP_001159970 16 5631 NP_006656 16 5631 NP_060083 16 5631 NP_001073936 16 5631 XP_005254804 16 5631 XP_006720791 16 5631 XP_005254803 16 5631 XP_005254800 16 5631 XP_005254799 16 5631 NP_003913 16 5631 NP_112506 16 7355 NP_006453 16 7355 NP_056175 16 7355 NP_060321 16 7355 XP_005260703 16 7355 XP_005260702 16 7355 XP_006720655 16 7355 XP_006720654 16 7355 XP_006720653 16 7355 XP_006720652 16 7355 XP_005254573 16 7355 NP_065840 16 7355 NP_001128522 16 7355 NP_000283 15 9605 NP_001230115 15 9605 NP_002639 15 9605 NP_060338 15 9605 NP_001001852 15 9605 NP_001348 15 9605 NP_001193968 15 9605 NP_001193965 15 9605 NP_001116295 15 9605 NP_037402 15 9605 NP_001075019 15 9605 NP_954863 15 9605 XP_006724836 15 9605 XP_005262507 15 9605 XP_006724835 15 9605 XP_006724834 15 9605 XP_006724833 15 9605 XP_006724832 15 9605 XP_006724831 15 9605 XP_006724830 15 9605 XP_005262504 15 9605 XP_006724561 15 9605 XP_005274607 15 9605 XP_005274605 15 9605 XP_006724560 15 9605 XP_006724559 15 9605 XP_005271664 15 9605 XP_006718929 15 9605 XP_005271663 15 9605 XP_005271662 15 9605 XP_005271661 15 9605 XP_005271660 15 9605>NP_000042 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VLRDVIYT 8 VLRDVIYT Sbjct: 1464 VLRDVIYT 1471>XP_006718908 Length = 1708 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VLRDVIYT 8 VLRDVIYT Sbjct: 116 VLRDVIYT 123>XP_005271621 Length = 2708 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VLRDVIYT 8 VLRDVIYT Sbjct: 1116 VLRDVIYT 1123>XP_006718907 Length = 3050 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VLRDVIYT 8 VLRDVIYT Sbjct: 1458 VLRDVIYT 1465>XP_006718906 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VLRDVIYT 8 VLRDVIYT Sbjct: 1464 VLRDVIYT 1471>XP_005271619 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VLRDVIYT 8 VLRDVIYT Sbjct: 1464 VLRDVIYT 1471>XP_005271618 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VLRDVIYT 8 VLRDVIYT Sbjct: 1464 VLRDVIYT 1471>NP_055722 Length = 1578 Score = 18.9 bits (37), Expect = 869 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LRDVIYTF 9 LRDV+YT+ Sbjct: 1524 LRDVVYTY 1531>NP_001192244 Length = 459 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLRDVIYTF 9 V+RDVIY + Sbjct: 219 VIRDVIYPY 227>NP_078912 Length = 459 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLRDVIYTF 9 V+RDVIY + Sbjct: 219 VIRDVIYPY 227>NP_001273206 Length = 897 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VLRDVIYTF 9 ++RD++Y F Sbjct: 240 LVRDILYVF 248>NP_001273207 Length = 824 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VLRDVIYTF 9 ++RD++Y F Sbjct: 250 LVRDILYVF 258>NP_001273208 Length = 439 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VLRDVIYTF 9 ++RD++Y F Sbjct: 250 LVRDILYVF 258>NP_006313 Length = 907 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VLRDVIYTF 9 ++RD++Y F Sbjct: 250 LVRDILYVF 258>XP_005268350 Length = 818 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VLRDVIYTF 9 ++RD++Y F Sbjct: 250 LVRDILYVF 258>NP_001092010 Length = 543 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DVIYTF 9 DV+YTF Sbjct: 171 DVLYTF 176>NP_001159970 Length = 469 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DVIYTF 9 DV+YTF Sbjct: 171 DVLYTF 176>NP_006656 Length = 543 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DVIYTF 9 DV+YTF Sbjct: 171 DVLYTF 176>NP_060083 Length = 566 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLRDVIYTF 9 VLRD IY + Sbjct: 556 VLRDYIYNW 564>NP_001073936 Length = 1848 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDVIYTF 9 +DVIYT+ Sbjct: 121 QDVIYTY 127>XP_005254804 Length = 4796 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LRDVIY 7 LRDVIY Sbjct: 985 LRDVIY 990>XP_006720791 Length = 4853 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LRDVIY 7 LRDVIY Sbjct: 1050 LRDVIY 1055>XP_005254803 Length = 4854 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LRDVIY 7 LRDVIY Sbjct: 1050 LRDVIY 1055>XP_005254800 Length = 4861 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LRDVIY 7 LRDVIY Sbjct: 1050 LRDVIY 1055>XP_005254799 Length = 4861 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LRDVIY 7 LRDVIY Sbjct: 1050 LRDVIY 1055>NP_003913 Length = 4861 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LRDVIY 7 LRDVIY Sbjct: 1050 LRDVIY 1055>NP_112506 Length = 510 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLRDVIYTF 9 VLR+ ++TF Sbjct: 296 VLRECLHTF 304>NP_006453 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLRDVIYTF 9 VLR+ ++TF Sbjct: 254 VLRECLHTF 262>NP_056175 Length = 1042 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRDVIYTF 9 L DV+YT+ Sbjct: 966 LMDVVYTW 973>NP_060321 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RDVIYTF 9 RD+IY F Sbjct: 145 RDLIYAF 151>XP_005260703 Length = 461 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLRDVIYTF 9 VLR+ ++TF Sbjct: 313 VLRECLHTF 321>XP_005260702 Length = 527 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLRDVIYTF 9 VLR+ ++TF Sbjct: 313 VLRECLHTF 321>XP_006720655 Length = 304 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RDVIYTF 9 RD+IY F Sbjct: 126 RDLIYAF 132>XP_006720654 Length = 309 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RDVIYTF 9 RD+IY F Sbjct: 145 RDLIYAF 151>XP_006720653 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RDVIYTF 9 RD+IY F Sbjct: 145 RDLIYAF 151>XP_006720652 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RDVIYTF 9 RD+IY F Sbjct: 145 RDLIYAF 151>XP_005254573 Length = 322 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RDVIYTF 9 RD+IY F Sbjct: 145 RDLIYAF 151>NP_065840 Length = 1163 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VLRDVIYTF 9 +++DV+Y F Sbjct: 670 LIKDVLYEF 678>NP_001128522 Length = 1179 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VLRDVIYTF 9 +++DV+Y F Sbjct: 686 LIKDVLYEF 694>NP_000283 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLRDVIYTF 9 V+R+ I+TF Sbjct: 512 VIRNQIFTF 520>NP_001230115 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VLRDVIYT 8 +L+D +YT Sbjct: 283 LLKDTVYT 290>NP_002639 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VLRDVIYT 8 +L+D +YT Sbjct: 192 LLKDTVYT 199>NP_060338 Length = 705 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLRDVIYT 8 + R+VIYT Sbjct: 491 LFREVIYT 498>NP_001001852 Length = 326 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VLRDVIYT 8 +L+D +YT Sbjct: 195 LLKDTVYT 202>NP_001348 Length = 1270 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLRDVIYTF 9 VLRDV+ + Sbjct: 526 VLRDVVQAY 534>NP_001193968 Length = 262 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LRDVIY 7 LRDV+Y Sbjct: 47 LRDVLY 52>NP_001193965 Length = 286 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LRDVIY 7 LRDV+Y Sbjct: 47 LRDVLY 52>NP_001116295 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LRDVIYTF 9 LRD +Y F Sbjct: 395 LRDSVYIF 402>NP_037402 Length = 385 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLRDVIYT 8 + RDVIY+ Sbjct: 156 IWRDVIYS 163>NP_001075019 Length = 1593 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VLRDVIYT 8 V D+IYT Sbjct: 1020 VFSDIIYT 1027>NP_954863 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLRDVIYTF 9 +L DVIY F Sbjct: 152 LLVDVIYIF 160>XP_006724836 Length = 1582 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VLRDVIYT 8 V D+IYT Sbjct: 960 VFSDIIYT 967>XP_005262507 Length = 1594 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VLRDVIYT 8 V D+IYT Sbjct: 1020 VFSDIIYT 1027>XP_006724835 Length = 1615 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VLRDVIYT 8 V D+IYT Sbjct: 1020 VFSDIIYT 1027>XP_006724834 Length = 1615 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VLRDVIYT 8 V D+IYT Sbjct: 1020 VFSDIIYT 1027>XP_006724833 Length = 1620 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VLRDVIYT 8 V D+IYT Sbjct: 1020 VFSDIIYT 1027>XP_006724832 Length = 1640 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VLRDVIYT 8 V D+IYT Sbjct: 1020 VFSDIIYT 1027>XP_006724831 Length = 1640 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VLRDVIYT 8 V D+IYT Sbjct: 1020 VFSDIIYT 1027>XP_006724830 Length = 1642 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VLRDVIYT 8 V D+IYT Sbjct: 1020 VFSDIIYT 1027>XP_005262504 Length = 1642 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 VLRDVIYT 8 V D+IYT Sbjct: 1020 VFSDIIYT 1027>XP_006724561 Length = 1061 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLRDVIYTF 9 V+R+ I+TF Sbjct: 330 VIRNQIFTF 338>XP_005274607 Length = 1207 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLRDVIYTF 9 V+R+ I+TF Sbjct: 512 VIRNQIFTF 520>XP_005274605 Length = 1217 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLRDVIYTF 9 V+R+ I+TF Sbjct: 512 VIRNQIFTF 520>XP_006724560 Length = 1225 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLRDVIYTF 9 V+R+ I+TF Sbjct: 512 VIRNQIFTF 520>XP_006724559 Length = 1243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLRDVIYTF 9 V+R+ I+TF Sbjct: 512 VIRNQIFTF 520>XP_005271664 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLRDVIYT 8 + R+VIYT Sbjct: 491 LFREVIYT 498>XP_006718929 Length = 756 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLRDVIYT 8 + R+VIYT Sbjct: 491 LFREVIYT 498>XP_005271663 Length = 774 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLRDVIYT 8 + R+VIYT Sbjct: 491 LFREVIYT 498>XP_005271662 Length = 777 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLRDVIYT 8 + R+VIYT Sbjct: 491 LFREVIYT 498>XP_005271661 Length = 777 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLRDVIYT 8 + R+VIYT Sbjct: 491 LFREVIYT 498>XP_005271660 Length = 777 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLRDVIYT 8 + R+VIYT Sbjct: 491 LFREVIYT 498Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.346 0.161 0.473 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 489,574 Number of extensions: 807 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |