Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_852111 21 229 NP_000136 21 229 NP_000360 21 229 XP_005268094 21 229 NP_000224 20 509 XP_005264366 20 509 XP_006712078 20 509 NP_073746 17 3301 XP_006723397 17 3301 XP_005259220 17 3301 XP_006723396 17 3301 XP_006723395 17 3301 XP_006723394 17 3301 XP_006723393 17 3301 XP_006723392 17 3301 NP_001181887 17 4312 NP_002805 17 4312 NP_736606 17 4312 NP_065133 17 4312 XP_005276976 17 4312 NP_001136433 17 4312 NP_001258349 16 7355 NP_060245 16 7355 NP_061141 16 7355 XP_005255020 16 7355 XP_006712935 16 7355 XP_006712934 16 7355 XP_006712933 16 7355 NP_852118 16 7355 NP_703146 16 7355 NP_001034764 16 7355 NP_006233 16 7355 NP_919299 15 9605 NP_001159687 15 9605 NP_001028692 15 9605 NP_001028690 15 9605 NP_057087 15 9605 NP_056425 15 9605 NP_001028691 15 9605 NP_001005188 15 9605 NP_001265228 15 9605 NP_110387 15 9605 XP_005260148 15 9605 XP_005259994 15 9605 XP_005251505 15 9605 XP_005251504 15 9605 XP_006715748 15 9605 NP_001004730 15 9605 NP_001004483 15 9605 NP_001010887 15 9605 NP_795369 15 9605>NP_852111 Length = 669 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LMCNLAFA 9 LMCNLAFA Sbjct: 374 LMCNLAFA 381>NP_000136 Length = 695 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LMCNLAFA 9 LMCNLAFA Sbjct: 400 LMCNLAFA 407>NP_000360 Length = 764 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LMCNLAFA 9 LMCNLAFA Sbjct: 452 LMCNLAFA 459>XP_005268094 Length = 764 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LMCNLAFA 9 LMCNLAFA Sbjct: 452 LMCNLAFA 459>NP_000224 Length = 699 Score = 19.6 bits (39), Expect = 509 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 LMCNLAFA 9 LMCNL+FA Sbjct: 397 LMCNLSFA 404>XP_005264366 Length = 380 Score = 19.6 bits (39), Expect = 509 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 LMCNLAFA 9 LMCNL+FA Sbjct: 78 LMCNLSFA 85>XP_006712078 Length = 389 Score = 19.6 bits (39), Expect = 509 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 LMCNLAFA 9 LMCNL+FA Sbjct: 87 LMCNLSFA 94>NP_073746 Length = 1386 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLMCNLAF 8 VL+C LAF Sbjct: 875 VLVCELAF 882>XP_006723397 Length = 1327 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLMCNLAF 8 VL+C LAF Sbjct: 816 VLVCELAF 823>XP_005259220 Length = 1386 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLMCNLAF 8 VL+C LAF Sbjct: 875 VLVCELAF 882>XP_006723396 Length = 1386 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLMCNLAF 8 VL+C LAF Sbjct: 875 VLVCELAF 882>XP_006723395 Length = 1387 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLMCNLAF 8 VL+C LAF Sbjct: 876 VLVCELAF 883>XP_006723394 Length = 1406 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLMCNLAF 8 VL+C LAF Sbjct: 895 VLVCELAF 902>XP_006723393 Length = 1406 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLMCNLAF 8 VL+C LAF Sbjct: 895 VLVCELAF 902>XP_006723392 Length = 1406 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLMCNLAF 8 VL+C LAF Sbjct: 895 VLVCELAF 902>NP_001181887 Length = 433 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CNLAFA 9 CN+AFA Sbjct: 53 CNIAFA 58>NP_002805 Length = 226 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 VLMCNLAFA 9 +++CNLA++ Sbjct: 8 LMVCNLAYS 16>NP_736606 Length = 151 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 VLMCNLAFA 9 +++CNLA++ Sbjct: 8 LMVCNLAYS 16>NP_065133 Length = 372 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VLMCNLA 7 V MCNLA Sbjct: 59 VYMCNLA 65>XP_005276976 Length = 535 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 CNLAFA 9 CN+AFA Sbjct: 155 CNIAFA 160>NP_001136433 Length = 372 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VLMCNLA 7 V MCNLA Sbjct: 59 VYMCNLA 65>NP_001258349 Length = 273 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LMCNLAF 8 LM NLAF Sbjct: 34 LMANLAF 40>NP_060245 Length = 380 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LMCNLAF 8 LM NLAF Sbjct: 141 LMANLAF 147>NP_061141 Length = 944 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 MCNLAFA 9 MCNLA + Sbjct: 799 MCNLAMS 805>XP_005255020 Length = 799 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 MCNLAFA 9 MCNLA + Sbjct: 654 MCNLAMS 660>XP_006712935 Length = 977 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 CNLAF 8 CNLAF Sbjct: 801 CNLAF 805>XP_006712934 Length = 1583 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 CNLAF 8 CNLAF Sbjct: 697 CNLAF 701>XP_006712933 Length = 1687 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 CNLAF 8 CNLAF Sbjct: 801 CNLAF 805>NP_852118 Length = 1684 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 CNLAF 8 CNLAF Sbjct: 798 CNLAF 802>NP_703146 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VLMCNLAF 8 + +C+LAF Sbjct: 61 IFLCHLAF 68>NP_001034764 Length = 929 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 MCNLAFA 9 MCNLA + Sbjct: 784 MCNLAMS 790>NP_006233 Length = 299 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLMCNLAF 8 V +CN+AF Sbjct: 193 VRVCNVAF 200>NP_919299 Length = 498 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLMCNLAF 8 +L C+LAF Sbjct: 18 LLTCSLAF 25>NP_001159687 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VLMCNLAF 8 VL C LAF Sbjct: 194 VLFCVLAF 201>NP_001028692 Length = 384 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLMCNLAFA 9 V +C+LAF+ Sbjct: 190 VSICSLAFS 198>NP_001028690 Length = 443 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLMCNLAFA 9 V +C+LAF+ Sbjct: 249 VSICSLAFS 257>NP_057087 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLMCNLAFA 9 V +C+LAF+ Sbjct: 231 VSICSLAFS 239>NP_056425 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLMCNLAFA 9 V +C+LAF+ Sbjct: 249 VSICSLAFS 257>NP_001028691 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLMCNLAFA 9 V +C+LAF+ Sbjct: 231 VSICSLAFS 239>NP_001005188 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 MCNLAF 8 +CNL+F Sbjct: 61 LCNLSF 66>NP_001265228 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLMCNLAFA 9 V +C+LAF+ Sbjct: 105 VSICSLAFS 113>NP_110387 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VLMCNLAF 8 VL C LAF Sbjct: 194 VLFCVLAF 201>XP_005260148 Length = 551 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 VLMCNLAFA 9 +L+C+++FA Sbjct: 56 LLVCSVSFA 64>XP_005259994 Length = 500 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VLMCNLAF 8 VL C LAF Sbjct: 296 VLFCVLAF 303>XP_005251505 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VLMCNLA 7 VLMC LA Sbjct: 51 VLMCALA 57>XP_005251504 Length = 229 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VLMCNLA 7 VLMC LA Sbjct: 100 VLMCALA 106>XP_006715748 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLMCNLAFA 9 V +C+LAF+ Sbjct: 105 VSICSLAFS 113>NP_001004730 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 MCNLAF 8 +CNL+F Sbjct: 63 LCNLSF 68>NP_001004483 Length = 320 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 MCNLAF 8 +CNL+F Sbjct: 63 LCNLSF 68>NP_001010887 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VLMCNLA 7 VLMC LA Sbjct: 100 VLMCALA 106>NP_795369 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LMCNLA 7 L+CNLA Sbjct: 140 LICNLA 145Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.349 0.143 0.474 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 514,090 Number of extensions: 802 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |