Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000446 16 5631 NP_003480 16 5631 XP_006724117 16 5631 XP_005261123 16 5631 XP_005261122 16 5631 XP_005261120 16 5631 XP_005259675 16 5631 XP_005259674 16 5631 NP_001611 16 7355 NP_001265506 16 7355 NP_001265507 16 7355 NP_001265505 16 7355 NP_001265504 16 7355 NP_775864 16 7355 NP_001192202 16 7355 XP_006718751 16 7355 XP_006718750 16 7355 XP_005274303 16 7355 XP_006718749 16 7355 XP_005274302 16 7355 XP_005274301 16 7355 XP_005274300 16 7355 XP_005274299 16 7355 XP_005274298 16 7355 XP_005274297 16 7355 NP_114171 16 7355 NP_061881 16 7355 NP_006556 15 9605 NP_055453 15 9605 NP_057698 15 9605 NP_055178 15 9605 NP_001264984 15 9605 NP_001275918 15 9605 NP_001159451 15 9605 NP_057425 15 9605 NP_079527 15 9605 NP_055871 15 9605 XP_006725014 15 9605 XP_006725013 15 9605 XP_006725012 15 9605 XP_005255832 15 9605 XP_005266395 15 9605 XP_006717953 15 9605 XP_006717952 15 9605 XP_006717951 15 9605 XP_006717950 15 9605 XP_006717949 15 9605 XP_006717948 15 9605 XP_006716724 15 9605 XP_006711118 15 9605 XP_006711117 15 9605>NP_000446 Length = 433 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLKKSKLR 9 +LKK KLR Sbjct: 79 ILKKKKLR 86>NP_003480 Length = 1158 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLKKSKLR 9 LLKKSK++ Sbjct: 188 LLKKSKVK 195>XP_006724117 Length = 1158 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLKKSKLR 9 LLKKSK++ Sbjct: 188 LLKKSKVK 195>XP_005261123 Length = 1158 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLKKSKLR 9 LLKKSK++ Sbjct: 188 LLKKSKVK 195>XP_005261122 Length = 1158 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLKKSKLR 9 LLKKSK++ Sbjct: 188 LLKKSKVK 195>XP_005261120 Length = 1158 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLKKSKLR 9 LLKKSK++ Sbjct: 188 LLKKSKVK 195>XP_005259675 Length = 404 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLKKSKLR 9 +LKK KLR Sbjct: 79 ILKKKKLR 86>XP_005259674 Length = 600 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLKKSKLR 9 +LKK KLR Sbjct: 79 ILKKKKLR 86>NP_001611 Length = 5890 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLKKSKLR 9 V LKKSK++ Sbjct: 5705 VKLKKSKIK 5713>NP_001265506 Length = 140 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLKKSKLR 9 LLKKSK R Sbjct: 123 LLKKSKHR 130>NP_001265507 Length = 140 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLKKSKLR 9 LLKKSK R Sbjct: 123 LLKKSKHR 130>NP_001265505 Length = 140 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLKKSKLR 9 LLKKSK R Sbjct: 123 LLKKSKHR 130>NP_001265504 Length = 140 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLKKSKLR 9 LLKKSK R Sbjct: 123 LLKKSKHR 130>NP_775864 Length = 998 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LKKSKLR 9 LK+SKLR Sbjct: 838 LKRSKLR 844>NP_001192202 Length = 148 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LLKKSKLR 9 LLKKSK R Sbjct: 131 LLKKSKHR 138>XP_006718751 Length = 3489 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLKKSKLR 9 V LKKSK++ Sbjct: 3304 VKLKKSKIK 3312>XP_006718750 Length = 4001 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLKKSKLR 9 V LKKSK++ Sbjct: 3816 VKLKKSKIK 3824>XP_005274303 Length = 4506 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLKKSKLR 9 V LKKSK++ Sbjct: 4321 VKLKKSKIK 4329>XP_006718749 Length = 4596 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLKKSKLR 9 V LKKSK++ Sbjct: 4411 VKLKKSKIK 4419>XP_005274302 Length = 5438 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLKKSKLR 9 V LKKSK++ Sbjct: 5253 VKLKKSKIK 5261>XP_005274301 Length = 5762 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLKKSKLR 9 V LKKSK++ Sbjct: 5577 VKLKKSKIK 5585>XP_005274300 Length = 5762 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLKKSKLR 9 V LKKSK++ Sbjct: 5577 VKLKKSKIK 5585>XP_005274299 Length = 5762 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLKKSKLR 9 V LKKSK++ Sbjct: 5577 VKLKKSKIK 5585>XP_005274298 Length = 5890 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLKKSKLR 9 V LKKSK++ Sbjct: 5705 VKLKKSKIK 5713>XP_005274297 Length = 5890 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLKKSKLR 9 V LKKSK++ Sbjct: 5705 VKLKKSKIK 5713>NP_114171 Length = 798 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLLKKSKLR 9 VLLKK+ L+ Sbjct: 655 VLLKKTSLK 663>NP_061881 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LKKSKLR 9 LKKS+LR Sbjct: 126 LKKSRLR 132>NP_006556 Length = 727 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KKSKLR 9 KKSKLR Sbjct: 208 KKSKLR 213>NP_055453 Length = 1416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LLKKSKLR 9 L+K+SK+R Sbjct: 524 LIKESKIR 531>NP_057698 Length = 362 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 VLLKKSKLR 9 ++LKKS+++ Sbjct: 182 IMLKKSRVK 190>NP_055178 Length = 4579 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VLLKKSK 7 VLLKK+K Sbjct: 1123 VLLKKAK 1129>NP_001264984 Length = 4432 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VLLKKSK 7 VLLKK+K Sbjct: 976 VLLKKAK 982>NP_001275918 Length = 2286 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLLKKSKLR 9 VLLK KL+ Sbjct: 1519 VLLKNKKLK 1527>NP_001159451 Length = 1994 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLLKKSKLR 9 VLLK KL+ Sbjct: 1227 VLLKNKKLK 1235>NP_057425 Length = 2302 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLLKKSKLR 9 VLLK KL+ Sbjct: 1535 VLLKNKKLK 1543>NP_079527 Length = 1114 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KKSKLR 9 KKSKLR Sbjct: 855 KKSKLR 860>NP_055871 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LKKSKLR 9 LKK KLR Sbjct: 631 LKKQKLR 637>XP_006725014 Length = 1129 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LLKKSKLR 9 L+K+SK+R Sbjct: 497 LIKESKIR 504>XP_006725013 Length = 1389 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LLKKSKLR 9 L+K+SK+R Sbjct: 497 LIKESKIR 504>XP_006725012 Length = 1388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LLKKSKLR 9 L+K+SK+R Sbjct: 497 LIKESKIR 504>XP_005255832 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KKSKLR 9 KKSKLR Sbjct: 208 KKSKLR 213>XP_005266395 Length = 4588 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VLLKKSK 7 VLLKK+K Sbjct: 1132 VLLKKAK 1138>XP_006717953 Length = 2008 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLLKKSKLR 9 VLLK KL+ Sbjct: 1227 VLLKNKKLK 1235>XP_006717952 Length = 2300 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLLKKSKLR 9 VLLK KL+ Sbjct: 1519 VLLKNKKLK 1527>XP_006717951 Length = 2315 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLLKKSKLR 9 VLLK KL+ Sbjct: 1535 VLLKNKKLK 1543>XP_006717950 Length = 2316 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLLKKSKLR 9 VLLK KL+ Sbjct: 1535 VLLKNKKLK 1543>XP_006717949 Length = 2316 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLLKKSKLR 9 VLLK KL+ Sbjct: 1535 VLLKNKKLK 1543>XP_006717948 Length = 2316 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VLLKKSKLR 9 VLLK KL+ Sbjct: 1535 VLLKNKKLK 1543>XP_006716724 Length = 970 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KKSKLR 9 KKSKLR Sbjct: 711 KKSKLR 716>XP_006711118 Length = 1129 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LLKKSKLR 9 L+K+SK+R Sbjct: 497 LIKESKIR 504>XP_006711117 Length = 1413 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LLKKSKLR 9 L+K+SK+R Sbjct: 521 LIKESKIR 528Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.139 0.322 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 432,356 Number of extensions: 702 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |