Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 17 2528 XP_006714104 17 2528 XP_005265800 17 2528 XP_006714103 17 2528 XP_006714102 17 2528 NP_005520 17 3301 NP_005038 17 3301 NP_001257356 17 3301 XP_006710661 17 3301 XP_005245920 17 3301 XP_006710660 17 3301 XP_006710659 17 3301 XP_006710658 17 3301 XP_006710657 17 3301 NP_004632 17 4312 NP_001182555 17 4312 NP_003043 17 4312 NP_001161051 17 4312 XP_005252669 17 4312 XP_005252668 17 4312 XP_006717572 17 4312 XP_005252667 17 4312 XP_005252666 17 4312 XP_005252665 17 4312 XP_005252663 17 4312 XP_005252662 17 4312 XP_005266032 17 4312 XP_005266031 17 4312 NP_000480 16 7355 NP_612114 16 7355 NP_064522 16 7355 XP_006724731 16 7355 XP_006724730 16 7355 XP_005262214 16 7355 XP_005262213 16 7355 XP_006724729 16 7355 XP_005262212 16 7355 XP_005262211 16 7355 XP_005262210 16 7355 XP_005272685 16 7355 NP_115989 16 7355 NP_002995 15 9605 NP_001032961 15 9605 NP_079199 15 9605 NP_057400 15 9605 NP_001177773 15 9605 XP_005256449 15 9605 XP_006712656 15 9605 XP_005264025 15 9605 XP_006712655 15 9605 NP_777567 15 9605>NP_006197 Length = 1089 Score = 17.3 bits (33), Expect = 2528 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VLEVSSAS 8 VLEVSSAS Sbjct: 84 VLEVSSAS 91>XP_006714104 Length = 832 Score = 17.3 bits (33), Expect = 2528 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VLEVSSAS 8 VLEVSSAS Sbjct: 109 VLEVSSAS 116>XP_005265800 Length = 1089 Score = 17.3 bits (33), Expect = 2528 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VLEVSSAS 8 VLEVSSAS Sbjct: 84 VLEVSSAS 91>XP_006714103 Length = 1111 Score = 17.3 bits (33), Expect = 2528 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VLEVSSAS 8 VLEVSSAS Sbjct: 106 VLEVSSAS 113>XP_006714102 Length = 1114 Score = 17.3 bits (33), Expect = 2528 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VLEVSSAS 8 VLEVSSAS Sbjct: 109 VLEVSSAS 116>NP_005520 Length = 4391 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLEVSSASP 9 VL++SSA P Sbjct: 3169 VLQISSAKP 3177>NP_005038 Length = 504 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLEVSSASP 9 ++E+SS SP Sbjct: 189 IIEISSVSP 197>NP_001257356 Length = 461 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLEVSSASP 9 ++E+SS SP Sbjct: 146 IIEISSVSP 154>XP_006710661 Length = 4057 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLEVSSASP 9 VL++SSA P Sbjct: 3352 VLQISSAKP 3360>XP_005245920 Length = 4392 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLEVSSASP 9 VL++SSA P Sbjct: 3170 VLQISSAKP 3178>XP_006710660 Length = 4397 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLEVSSASP 9 VL++SSA P Sbjct: 3169 VLQISSAKP 3177>XP_006710659 Length = 4556 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLEVSSASP 9 VL++SSA P Sbjct: 3328 VLQISSAKP 3336>XP_006710658 Length = 4563 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLEVSSASP 9 VL++SSA P Sbjct: 3335 VLQISSAKP 3343>XP_006710657 Length = 4579 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VLEVSSASP 9 VL++SSA P Sbjct: 3351 VLQISSAKP 3359>NP_004632 Length = 1027 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LEVSSASP 9 L VSSASP Sbjct: 493 LSVSSASP 500>NP_001182555 Length = 1068 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LEVSSASP 9 L VSSASP Sbjct: 493 LSVSSASP 500>NP_003043 Length = 639 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VLEVSSASP 9 +LEVSSA P Sbjct: 178 LLEVSSAIP 186>NP_001161051 Length = 340 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VLEVSSASP 9 +LEVSSA P Sbjct: 178 LLEVSSAIP 186>XP_005252669 Length = 584 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LEVSSASP 9 L VSSASP Sbjct: 493 LSVSSASP 500>XP_005252668 Length = 839 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LEVSSASP 9 L VSSASP Sbjct: 248 LSVSSASP 255>XP_006717572 Length = 1003 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LEVSSASP 9 L VSSASP Sbjct: 493 LSVSSASP 500>XP_005252667 Length = 1052 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LEVSSASP 9 L VSSASP Sbjct: 461 LSVSSASP 468>XP_005252666 Length = 1057 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LEVSSASP 9 L VSSASP Sbjct: 493 LSVSSASP 500>XP_005252665 Length = 1068 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LEVSSASP 9 L VSSASP Sbjct: 493 LSVSSASP 500>XP_005252663 Length = 1084 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LEVSSASP 9 L VSSASP Sbjct: 493 LSVSSASP 500>XP_005252662 Length = 1084 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LEVSSASP 9 L VSSASP Sbjct: 493 LSVSSASP 500>XP_005266032 Length = 583 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VLEVSSASP 9 +LEVSSA P Sbjct: 178 LLEVSSAIP 186>XP_005266031 Length = 639 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VLEVSSASP 9 +LEVSSA P Sbjct: 178 LLEVSSAIP 186>NP_000480 Length = 2492 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLEVSSASP 9 V+E+ ASP Sbjct: 1520 VIEIEDASP 1528>NP_612114 Length = 2454 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLEVSSASP 9 V+E+ ASP Sbjct: 1482 VIEIEDASP 1490>NP_064522 Length = 841 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 LEVSSAS 8 LEVSSAS Sbjct: 732 LEVSSAS 738>XP_006724731 Length = 1871 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLEVSSASP 9 V+E+ ASP Sbjct: 1520 VIEIEDASP 1528>XP_006724730 Length = 2399 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLEVSSASP 9 V+E+ ASP Sbjct: 1427 VIEIEDASP 1435>XP_005262214 Length = 2424 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLEVSSASP 9 V+E+ ASP Sbjct: 1452 VIEIEDASP 1460>XP_005262213 Length = 2437 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLEVSSASP 9 V+E+ ASP Sbjct: 1465 VIEIEDASP 1473>XP_006724729 Length = 2453 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLEVSSASP 9 V+E+ ASP Sbjct: 1481 VIEIEDASP 1489>XP_005262212 Length = 2453 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLEVSSASP 9 V+E+ ASP Sbjct: 1481 VIEIEDASP 1489>XP_005262211 Length = 2463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLEVSSASP 9 V+E+ ASP Sbjct: 1491 VIEIEDASP 1499>XP_005262210 Length = 2491 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLEVSSASP 9 V+E+ ASP Sbjct: 1519 VIEIEDASP 1527>XP_005272685 Length = 815 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 LEVSSAS 8 LEVSSAS Sbjct: 706 LEVSSAS 712>NP_115989 Length = 328 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LEVSSASP 9 +E+SSA P Sbjct: 188 MEISSAEP 195>NP_002995 Length = 248 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LEVSSASP 9 LEVS A P Sbjct: 131 LEVSGAEP 138>NP_001032961 Length = 1250 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LEVSSAS 8 LE+SSAS Sbjct: 878 LEISSAS 884>NP_079199 Length = 1887 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LEVSSASP 9 LEV S SP Sbjct: 1721 LEVKSGSP 1728>NP_057400 Length = 1251 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LEVSSAS 8 LE+SSAS Sbjct: 879 LEISSAS 885>NP_001177773 Length = 291 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EVSSASP 9 EVS ASP Sbjct: 200 EVSKASP 206>XP_005256449 Length = 248 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LEVSSASP 9 LEVS A P Sbjct: 131 LEVSGAEP 138>XP_006712656 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LEVSSAS 8 LE+SSAS Sbjct: 389 LEISSAS 395>XP_005264025 Length = 1181 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LEVSSAS 8 LE+SSAS Sbjct: 809 LEISSAS 815>XP_006712655 Length = 1251 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LEVSSAS 8 LE+SSAS Sbjct: 879 LEISSAS 885>NP_777567 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 EVSSASP 9 EVSS SP Sbjct: 221 EVSSVSP 227Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.293 0.109 0.254 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 426,427 Number of extensions: 886 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |