Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 19 869 NP_001263689 19 869 NP_001119584 19 869 NP_001119590 19 869 NP_001263690 19 869 NP_001119587 19 869 NP_001263626 19 869 NP_001002901 17 3301 NP_775487 17 4312 XP_005268753 17 4312 XP_005268752 17 4312 NP_006297 16 5631 NP_001268392 16 5631 NP_000024 16 7355 NP_006435 16 7355 NP_001036016 16 7355 NP_001252531 16 7355 NP_001036015 16 7355 NP_060694 16 7355 XP_006716996 16 7355 XP_006715815 16 7355 XP_005249864 16 7355 XP_006715814 16 7355 XP_005249863 16 7355 XP_005249861 16 7355 NP_001243415 15 9605 NP_001243417 15 9605 NP_004478 15 9605 NP_001243416 15 9605 NP_001107854 15 9605 NP_001070651 15 9605 NP_000539 15 9605 NP_003354 15 9605 NP_778223 15 9605 NP_955475 15 9605 NP_001158058 15 9605 NP_005722 15 9605 NP_690601 15 9605 XP_005255589 15 9605 XP_005255588 15 9605 XP_005255587 15 9605 XP_005255586 15 9605 XP_005255585 15 9605 XP_005255584 15 9605 XP_006713654 15 9605 XP_006713653 15 9605 XP_005247430 15 9605 XP_005247429 15 9605 XP_006713652 15 9605 XP_006713651 15 9605 XP_006713650 15 9605 XP_005247428 15 9605 XP_006712236 15 9605 XP_006711681 15 9605 XP_006711680 15 9605 XP_005245637 15 9605>NP_000537 Length = 393 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELKDAQA 9 LELKDAQA Sbjct: 348 LELKDAQA 355>NP_001263689 Length = 354 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELKDAQA 9 LELKDAQA Sbjct: 309 LELKDAQA 316>NP_001119584 Length = 393 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELKDAQA 9 LELKDAQA Sbjct: 348 LELKDAQA 355>NP_001119590 Length = 354 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELKDAQA 9 LELKDAQA Sbjct: 309 LELKDAQA 316>NP_001263690 Length = 354 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELKDAQA 9 LELKDAQA Sbjct: 309 LELKDAQA 316>NP_001119587 Length = 261 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELKDAQA 9 LELKDAQA Sbjct: 216 LELKDAQA 223>NP_001263626 Length = 234 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELKDAQA 9 LELKDAQA Sbjct: 189 LELKDAQA 196>NP_001002901 Length = 426 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VLELKDAQA 9 VLELK+ QA Sbjct: 389 VLELKEPQA 397>NP_775487 Length = 520 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LELKDAQA 9 L LKDAQA Sbjct: 366 LALKDAQA 373>XP_005268753 Length = 291 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LELKDAQA 9 L LKDAQA Sbjct: 137 LALKDAQA 144>XP_005268752 Length = 410 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LELKDAQA 9 L LKDAQA Sbjct: 256 LALKDAQA 263>NP_006297 Length = 1233 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ELKDAQA 9 +LKDAQA Sbjct: 989 DLKDAQA 995>NP_001268392 Length = 1211 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ELKDAQA 9 +LKDAQA Sbjct: 967 DLKDAQA 973>NP_000024 Length = 745 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ELKDAQA 9 EL+DAQA Sbjct: 439 ELEDAQA 445>NP_006435 Length = 1197 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELKDAQ 8 ELKDAQ Sbjct: 790 ELKDAQ 795>NP_001036016 Length = 1197 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELKDAQ 8 ELKDAQ Sbjct: 790 ELKDAQ 795>NP_001252531 Length = 1197 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELKDAQ 8 ELKDAQ Sbjct: 790 ELKDAQ 795>NP_001036015 Length = 1197 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELKDAQ 8 ELKDAQ Sbjct: 790 ELKDAQ 795>NP_060694 Length = 146 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LELKDAQ 8 LELKD Q Sbjct: 122 LELKDGQ 128>XP_006716996 Length = 1197 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELKDAQ 8 ELKDAQ Sbjct: 790 ELKDAQ 795>XP_006715815 Length = 146 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LELKDAQ 8 LELKD Q Sbjct: 122 LELKDGQ 128>XP_005249864 Length = 146 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LELKDAQ 8 LELKD Q Sbjct: 122 LELKDGQ 128>XP_006715814 Length = 146 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LELKDAQ 8 LELKD Q Sbjct: 122 LELKDGQ 128>XP_005249863 Length = 146 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LELKDAQ 8 LELKD Q Sbjct: 122 LELKDGQ 128>XP_005249861 Length = 146 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LELKDAQ 8 LELKD Q Sbjct: 122 LELKDGQ 128>NP_001243415 Length = 3269 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VLELKDAQ 8 +LE+K+AQ Sbjct: 568 LLEMKEAQ 575>NP_001243417 Length = 3184 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VLELKDAQ 8 +LE+K+AQ Sbjct: 488 LLEMKEAQ 495>NP_004478 Length = 3259 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VLELKDAQ 8 +LE+K+AQ Sbjct: 563 LLEMKEAQ 570>NP_001243416 Length = 3225 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VLELKDAQ 8 +LE+K+AQ Sbjct: 529 LLEMKEAQ 536>NP_001107854 Length = 1784 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLELKDAQ 8 ++ELKD Q Sbjct: 1558 LIELKDCQ 1565>NP_001070651 Length = 1740 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLELKDAQ 8 ++ELKD Q Sbjct: 1514 LIELKDCQ 1521>NP_000539 Length = 1807 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLELKDAQ 8 ++ELKD Q Sbjct: 1581 LIELKDCQ 1588>NP_003354 Length = 963 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LELKDA 7 LELKDA Sbjct: 418 LELKDA 423>NP_778223 Length = 529 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LKDAQA 9 LKDAQA Sbjct: 397 LKDAQA 402>NP_955475 Length = 916 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LELKDA 7 LELKDA Sbjct: 371 LELKDA 376>NP_001158058 Length = 3708 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LELKDAQA 9 L+LKD+Q+ Sbjct: 236 LDLKDSQS 243>NP_005722 Length = 300 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LELKDAQA 9 LELKD A Sbjct: 207 LELKDTDA 214>NP_690601 Length = 300 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LELKDAQA 9 LELKD A Sbjct: 207 LELKDTDA 214>XP_005255589 Length = 1831 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLELKDAQ 8 ++ELKD Q Sbjct: 1605 LIELKDCQ 1612>XP_005255588 Length = 1832 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLELKDAQ 8 ++ELKD Q Sbjct: 1606 LIELKDCQ 1613>XP_005255587 Length = 1854 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLELKDAQ 8 ++ELKD Q Sbjct: 1628 LIELKDCQ 1635>XP_005255586 Length = 1855 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLELKDAQ 8 ++ELKD Q Sbjct: 1629 LIELKDCQ 1636>XP_005255585 Length = 1875 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLELKDAQ 8 ++ELKD Q Sbjct: 1649 LIELKDCQ 1656>XP_005255584 Length = 1898 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLELKDAQ 8 ++ELKD Q Sbjct: 1672 LIELKDCQ 1679>XP_006713654 Length = 3189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VLELKDAQ 8 +LE+K+AQ Sbjct: 488 LLEMKEAQ 495>XP_006713653 Length = 3223 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VLELKDAQ 8 +LE+K+AQ Sbjct: 527 LLEMKEAQ 534>XP_005247430 Length = 3228 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VLELKDAQ 8 +LE+K+AQ Sbjct: 527 LLEMKEAQ 534>XP_005247429 Length = 3230 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VLELKDAQ 8 +LE+K+AQ Sbjct: 529 LLEMKEAQ 536>XP_006713652 Length = 3263 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VLELKDAQ 8 +LE+K+AQ Sbjct: 562 LLEMKEAQ 569>XP_006713651 Length = 3264 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VLELKDAQ 8 +LE+K+AQ Sbjct: 563 LLEMKEAQ 570>XP_006713650 Length = 3264 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VLELKDAQ 8 +LE+K+AQ Sbjct: 568 LLEMKEAQ 575>XP_005247428 Length = 3269 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 VLELKDAQ 8 +LE+K+AQ Sbjct: 568 LLEMKEAQ 575>XP_006712236 Length = 245 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LELKDAQA 9 LELKD A Sbjct: 152 LELKDTDA 159>XP_006711681 Length = 3448 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LELKDAQA 9 L+LKD+Q+ Sbjct: 236 LDLKDSQS 243>XP_006711680 Length = 3617 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LELKDAQA 9 L+LKD+Q+ Sbjct: 236 LDLKDSQS 243>XP_005245637 Length = 3683 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LELKDAQA 9 L+LKD+Q+ Sbjct: 236 LDLKDSQS 243Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.126 0.295 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 513,408 Number of extensions: 883 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |