Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000312 20 299 NP_001073922 18 1935 NP_006009 17 3301 NP_000351 17 4312 NP_954986 17 4312 NP_954987 17 4312 NP_054799 17 4312 NP_001098395 17 4312 NP_078803 17 4312 XP_005254478 17 4312 XP_006710454 17 4312 XP_006710453 17 4312 XP_005270593 17 4312 NP_060727 17 4312 NP_001896 17 4312 NP_060895 16 5631 NP_991111 16 5631 XP_006714627 16 5631 XP_006714239 16 5631 XP_006714238 16 5631 XP_005263713 16 5631 XP_005263712 16 5631 NP_036240 16 5631 NP_694983 16 7355 NP_009046 16 7355 NP_001273567 16 7355 NP_037523 16 7355 XP_006719861 16 7355 XP_006719860 16 7355 XP_006719859 16 7355 XP_006719858 16 7355 XP_006714661 16 7355 XP_006714660 16 7355 XP_005248232 16 7355 XP_005248231 16 7355 NP_060793 16 7355 NP_001124481 15 9605 NP_001124480 15 9605 NP_002826 15 9605 NP_001073279 15 9605 NP_000395 15 9605 NP_001243888 15 9605 NP_037521 15 9605 NP_001277 15 9605 NP_001271151 15 9605 NP_001271224 15 9605 NP_001095118 15 9605 NP_114100 15 9605 NP_001073864 15 9605 NP_001271153 15 9605 NP_001271155 15 9605 NP_061888 15 9605 NP_001271154 15 9605 NP_612463 15 9605 NP_065186 15 9605 NP_001036000 15 9605 NP_114152 15 9605 NP_002430 15 9605 NP_004911 15 9605 NP_001271149 15 9605 XP_005257912 15 9605 XP_006722260 15 9605 XP_006722259 15 9605 XP_006722258 15 9605 XP_006722257 15 9605 XP_006722256 15 9605 XP_006716417 15 9605 XP_006716137 15 9605 XP_005250575 15 9605 XP_006716136 15 9605 XP_005249999 15 9605 XP_006714087 15 9605 XP_005248177 15 9605 XP_005248176 15 9605 XP_005248175 15 9605 NP_060561 15 9605>NP_000312 Length = 928 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VLDYFIRLS 9 VLDYFI+LS Sbjct: 222 VLDYFIKLS 230>NP_001073922 Length = 2190 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VLDYFIR 7 VLDYF+R Sbjct: 971 VLDYFLR 977>NP_006009 Length = 387 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLDYFIRLS 9 V+DY++R S Sbjct: 83 VMDYYVRRS 91>NP_000351 Length = 497 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LDYFIRL 8 L+YF+RL Sbjct: 128 LEYFVRL 134>NP_954986 Length = 528 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LDYFIRL 8 L+YF+RL Sbjct: 159 LEYFVRL 165>NP_954987 Length = 524 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LDYFIRL 8 L+YF+RL Sbjct: 155 LEYFVRL 161>NP_054799 Length = 1548 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLDYFIRL 8 VLD F+RL Sbjct: 504 VLDQFVRL 511>NP_001098395 Length = 334 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LDYFIRLS 9 LD+FIR S Sbjct: 125 LDFFIRTS 132>NP_078803 Length = 439 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LDYFIRL 8 LD+F+RL Sbjct: 195 LDFFVRL 201>XP_005254478 Length = 1548 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VLDYFIRL 8 VLD F+RL Sbjct: 504 VLDQFVRL 511>XP_006710454 Length = 591 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLDYFIR 7 V+DYF+R Sbjct: 262 VVDYFLR 268>XP_006710453 Length = 591 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLDYFIR 7 V+DYF+R Sbjct: 262 VVDYFLR 268>XP_005270593 Length = 591 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLDYFIR 7 V+DYF+R Sbjct: 262 VVDYFLR 268>NP_060727 Length = 361 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LDYFIRLS 9 LD+FIR S Sbjct: 125 LDFFIRTS 132>NP_001896 Length = 591 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLDYFIR 7 V+DYF+R Sbjct: 262 VVDYFLR 268>NP_060895 Length = 479 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VLDYFIR 7 VLDY IR Sbjct: 299 VLDYIIR 305>NP_991111 Length = 276 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLDYFIRLS 9 +L+YF+R S Sbjct: 15 ILEYFLRNS 23>XP_006714627 Length = 272 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLDYFIRLS 9 +L+YF+R S Sbjct: 11 ILEYFLRNS 19>XP_006714239 Length = 276 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VLDYFIR 7 V+DYF++ Sbjct: 233 VIDYFVK 239>XP_006714238 Length = 295 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VLDYFIR 7 V+DYF++ Sbjct: 252 VIDYFVK 258>XP_005263713 Length = 317 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LDYFIRLS 9 L YF+R+S Sbjct: 48 LHYFVRIS 55>XP_005263712 Length = 317 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LDYFIRLS 9 L YF+R+S Sbjct: 48 LHYFVRIS 55>NP_036240 Length = 295 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VLDYFIR 7 V+DYF++ Sbjct: 252 VIDYFVK 258>NP_694983 Length = 354 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLDYFIR 7 VL+YFI+ Sbjct: 189 VLEYFIK 195>NP_009046 Length = 277 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLDYFIRLS 9 ++DY IRL+ Sbjct: 110 IIDYGIRLN 118>NP_001273567 Length = 292 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLDYFIR 7 VL+YFI+ Sbjct: 126 VLEYFIK 132>NP_037523 Length = 866 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LDYFIRLS 9 L+YF++L+ Sbjct: 742 LEYFVKLN 749>XP_006719861 Length = 286 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLDYFIR 7 VL+YFI+ Sbjct: 110 VLEYFIK 116>XP_006719860 Length = 355 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLDYFIR 7 VL+YFI+ Sbjct: 189 VLEYFIK 195>XP_006719859 Length = 364 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLDYFIR 7 VL+YFI+ Sbjct: 189 VLEYFIK 195>XP_006719858 Length = 365 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VLDYFIR 7 VL+YFI+ Sbjct: 189 VLEYFIK 195>XP_006714661 Length = 486 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LDYFIRLS 9 L+YF++L+ Sbjct: 362 LEYFVKLN 369>XP_006714660 Length = 774 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LDYFIRLS 9 L+YF++L+ Sbjct: 742 LEYFVKLN 749>XP_005248232 Length = 385 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VLDYFIR 7 +LDY IR Sbjct: 199 ILDYIIR 205>XP_005248231 Length = 476 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VLDYFIR 7 +LDY IR Sbjct: 290 ILDYIIR 296>NP_060793 Length = 481 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VLDYFIR 7 +LDY IR Sbjct: 295 ILDYIIR 301>NP_001124481 Length = 650 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 DYFIR 7 DYFIR Sbjct: 42 DYFIR 46>NP_001124480 Length = 661 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 DYFIR 7 DYFIR Sbjct: 53 DYFIR 57>NP_002826 Length = 780 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 DYFIR 7 DYFIR Sbjct: 172 DYFIR 176>NP_001073279 Length = 647 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LDYFIRLS 9 ++YF+RL+ Sbjct: 74 VEYFLRLA 81>NP_000395 Length = 677 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LDYFIRLS 9 ++YF+RL+ Sbjct: 104 VEYFLRLA 111>NP_001243888 Length = 847 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LDYFIRL 8 +D+F+RL Sbjct: 76 VDFFVRL 82>NP_037521 Length = 1359 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLDYFIRLS 9 +LDYF+ L+ Sbjct: 883 LLDYFLFLN 891>NP_001277 Length = 869 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 LDYFIRL 8 +D+F+RL Sbjct: 98 VDFFVRL 104>NP_001271151 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 DYFIR 7 DYFIR Sbjct: 169 DYFIR 173>NP_001271224 Length = 764 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLDYFIRLS 9 V+D F+R S Sbjct: 696 VMDVFLRFS 704>NP_001095118 Length = 1332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VLDYFIRLS 9 +LDYF+ L+ Sbjct: 883 LLDYFLFLN 891>NP_114100 Length = 183 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 YFIRLS 9 YF+RLS Sbjct: 55 YFLRLS 60>NP_001073864 Length = 1374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DYFIRL 8 +YFIRL Sbjct: 529 EYFIRL 534>NP_001271153 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 DYFIR 7 DYFIR Sbjct: 64 DYFIR 68>NP_001271155 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 DYFIR 7 DYFIR Sbjct: 91 DYFIR 95>NP_061888 Length = 772 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VLDYFIRLS 9 V+D F+R S Sbjct: 704 VMDVFLRFS 712>NP_001271154 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 DYFIR 7 DYFIR Sbjct: 64 DYFIR 68>NP_612463 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 DYFIRLS 9 D+F+RL+ Sbjct: 56 DFFVRLT 62>NP_065186 Length = 1426 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VLDYFIRLS 9 ++D+FI L+ Sbjct: 584 IIDFFIALA 592>NP_001036000 Length = 396 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLDYFIRL 8 V +YF+RL Sbjct: 211 VYNYFLRL 218>NP_114152 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLDYFIRL 8 V +YF+RL Sbjct: 211 VYNYFLRL 218>NP_002430 Length = 1137 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LDYFIR 7 L+YFIR Sbjct: 994 LEYFIR 999>NP_004911 Length = 1271 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DYFIRL 8 +YFIRL Sbjct: 426 EYFIRL 431>NP_001271149 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 DYFIR 7 DYFIR Sbjct: 111 DYFIR 115>XP_005257912 Length = 915 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DYFIRL 8 +YFIRL Sbjct: 529 EYFIRL 534>XP_006722260 Length = 1152 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DYFIRL 8 +YFIRL Sbjct: 307 EYFIRL 312>XP_006722259 Length = 1326 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DYFIRL 8 +YFIRL Sbjct: 481 EYFIRL 486>XP_006722258 Length = 1207 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DYFIRL 8 +YFIRL Sbjct: 362 EYFIRL 367>XP_006722257 Length = 1324 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DYFIRL 8 +YFIRL Sbjct: 479 EYFIRL 484>XP_006722256 Length = 1326 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 DYFIRL 8 +YFIRL Sbjct: 481 EYFIRL 486>XP_006716417 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 DYFIR 7 DYFIR Sbjct: 64 DYFIR 68>XP_006716137 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 DYFIR 7 DYFIR Sbjct: 57 DYFIR 61>XP_005250575 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 DYFIR 7 DYFIR Sbjct: 57 DYFIR 61>XP_006716136 Length = 748 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 DYFIR 7 DYFIR Sbjct: 140 DYFIR 144>XP_005249999 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VLDYFIRL 8 V +YF+RL Sbjct: 391 VYNYFLRL 398>XP_006714087 Length = 1337 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VLDYFIRLS 9 ++D+FI L+ Sbjct: 495 IIDFFIALA 503>XP_005248177 Length = 1399 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VLDYFIRLS 9 ++D+FI L+ Sbjct: 584 IIDFFIALA 592>XP_005248176 Length = 1411 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VLDYFIRLS 9 ++D+FI L+ Sbjct: 569 IIDFFIALA 577>XP_005248175 Length = 1426 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VLDYFIRLS 9 ++D+FI L+ Sbjct: 584 IIDFFIALA 592>NP_060561 Length = 547 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 DYFIR 7 DYFIR Sbjct: 183 DYFIR 187Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.345 0.162 0.463 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 486,295 Number of extensions: 894 Number of successful extensions: 76 Number of sequences better than 10000.0: 76 Number of HSP's gapped: 76 Number of HSP's successfully gapped: 76 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |