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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_000042                                                              18    1482
XP_006718908                                                           18    1482
XP_005271621                                                           18    1482
XP_006718907                                                           18    1482
XP_006718906                                                           18    1482
XP_005271619                                                           18    1482
XP_005271618                                                           18    1482
NP_004777                                                              16    5631
NP_775760                                                              16    5631
XP_006722644                                                           16    5631
XP_006722643                                                           16    5631
NP_065944                                                              16    7355
NP_036450                                                              16    7355
NP_076994                                                              16    7355
NP_060392                                                              16    7355
XP_005261914                                                           16    7355
XP_005254133                                                           16    7355
XP_005254132                                                           16    7355
XP_005254131                                                           16    7355
XP_006713947                                                           16    7355
NP_076409                                                              16    7355
NP_004277                                                              16    7355
NP_110399                                                              15    9605
NP_005688                                                              15    9605
NP_001248755                                                           15    9605
NP_003929                                                              15    9605
XP_006722995                                                           15    9605
XP_006720432                                                           15    9605
NP_803875                                                              15    9605

>NP_000042
          Length = 3056

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    VKLFVNLLQ 9
            VKL VNLLQ
Sbjct: 1645 VKLVVNLLQ 1653



>XP_006718908
          Length = 1708

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   VKLFVNLLQ 9
           VKL VNLLQ
Sbjct: 297 VKLVVNLLQ 305



>XP_005271621
          Length = 2708

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    VKLFVNLLQ 9
            VKL VNLLQ
Sbjct: 1297 VKLVVNLLQ 1305



>XP_006718907
          Length = 3050

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    VKLFVNLLQ 9
            VKL VNLLQ
Sbjct: 1639 VKLVVNLLQ 1647



>XP_006718906
          Length = 3056

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    VKLFVNLLQ 9
            VKL VNLLQ
Sbjct: 1645 VKLVVNLLQ 1653



>XP_005271619
          Length = 3056

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    VKLFVNLLQ 9
            VKL VNLLQ
Sbjct: 1645 VKLVVNLLQ 1653



>XP_005271618
          Length = 3056

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    VKLFVNLLQ 9
            VKL VNLLQ
Sbjct: 1645 VKLVVNLLQ 1653



>NP_004777
          Length = 289

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   VKLFVNL 7
           VK+F+NL
Sbjct: 194 VKIFINL 200



>NP_775760
          Length = 1585

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   LFVNLLQ 9
           +F+NLLQ
Sbjct: 276 IFINLLQ 282



>XP_006722644
          Length = 255

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   VKLFVNL 7
           VK+F+NL
Sbjct: 194 VKIFINL 200



>XP_006722643
          Length = 292

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   VKLFVNL 7
           VK+F+NL
Sbjct: 194 VKIFINL 200



>NP_065944
          Length = 1701

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   KLFVNLLQ 9
           +LFVNL++
Sbjct: 324 QLFVNLME 331



>NP_036450
          Length = 739

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   VKLFVNLL 8
           VKLF N+L
Sbjct: 229 VKLFPNML 236



>NP_076994
          Length = 502

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   VKLFVNL 7
           V+LFVNL
Sbjct: 230 VELFVNL 236



>NP_060392
          Length = 669

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   KLFVNLLQ 9
           KL++NLL+
Sbjct: 528 KLYLNLLE 535



>XP_005261914
          Length = 557

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   VKLFVNLL 8
           +K+F+NLL
Sbjct: 264 LKMFLNLL 271



>XP_005254133
          Length = 283

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1  VKLFVNL 7
          V+LFVNL
Sbjct: 11 VELFVNL 17



>XP_005254132
          Length = 466

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   VKLFVNL 7
           V+LFVNL
Sbjct: 230 VELFVNL 236



>XP_005254131
          Length = 476

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   VKLFVNL 7
           V+LFVNL
Sbjct: 204 VELFVNL 210



>XP_006713947
          Length = 738

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   VKLFVNLL 8
           VKLF N+L
Sbjct: 229 VKLFPNML 236



>NP_076409
          Length = 303

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   VKLFVNLLQ 9
           V LF+NL+Q
Sbjct: 139 VFLFLNLIQ 147



>NP_004277
          Length = 669

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   VKLFVNLL 8
           +K+F+NLL
Sbjct: 376 LKMFLNLL 383



>NP_110399
          Length = 515

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   VKLFVNLLQ 9
           + LF+N+L+
Sbjct: 221 ISLFLNILE 229



>NP_005688
          Length = 329

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   VKLFVNLL 8
           V LF+NLL
Sbjct: 161 VTLFLNLL 168



>NP_001248755
          Length = 1215

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   VKLFVNLLQ 9
           VKL+ ++LQ
Sbjct: 527 VKLYASILQ 535



>NP_003929
          Length = 1153

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   VKLFVNLLQ 9
           VKL+ ++LQ
Sbjct: 527 VKLYASILQ 535



>XP_006722995
          Length = 1203

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   VKLFVNLLQ 9
           VKL+ ++LQ
Sbjct: 527 VKLYASILQ 535



>XP_006720432
          Length = 372

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   VKLFVNLL 8
           V LF+NLL
Sbjct: 204 VTLFLNLL 211



>NP_803875
          Length = 4243

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    VKLFVNLL 8
            VK+FVN +
Sbjct: 1894 VKIFVNTI 1901



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.339    0.154    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 375,786
Number of extensions: 696
Number of successful extensions: 29
Number of sequences better than 10000.0: 29
Number of HSP's gapped: 29
Number of HSP's successfully gapped: 29
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.4 bits)
S2: 28 (15.4 bits)