Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005219 19 869 NP_001036064 19 869 NP_005226 19 869 NP_001276866 19 869 NP_004439 19 869 NP_001276865 19 869 NP_001005862 19 869 XP_005257197 19 869 XP_006721828 19 869 XP_005246434 19 869 XP_005246433 19 869 XP_005246432 19 869 XP_006712427 19 869 NP_775926 18 1935 NP_001265229 18 1935 NP_001073917 18 1935 NP_937784 18 1935 XP_006713657 18 1935 XP_006713656 18 1935 XP_006713655 18 1935 NP_004422 17 2528 XP_005245809 17 2528 XP_005245808 17 2528 NP_001973 17 3301 NP_001268695 17 3301 NP_872272 17 3301 NP_004430 17 3301 NP_001268694 17 3301 NP_001268696 17 3301 XP_005265710 17 3301 NP_056327 16 5631 NP_079463 16 5631 XP_005256234 16 5631 XP_005256235 16 5631 XP_006721347 16 5631 XP_006713163 16 5631 NP_001787 16 7355 NP_001788 16 7355 XP_005255824 16 7355 XP_005255823 16 7355 XP_005255821 16 7355 XP_005255820 16 7355 XP_005255819 16 7355 XP_005255818 16 7355 XP_005255817 16 7355 XP_005255816 16 7355 NP_003841 15 9605 NP_004647 15 9605 NP_004813 15 9605 NP_060318 15 9605 NP_002022 15 9605 NP_002941 15 9605 XP_005262078 15 9605 XP_006724652 15 9605 XP_006721658 15 9605 XP_005266938 15 9605 XP_005266939 15 9605 XP_005266937 15 9605>NP_005219 Length = 1210 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VKIPVAIK 8 VKIPVAIK Sbjct: 738 VKIPVAIK 745>NP_001036064 Length = 1292 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VKIPVAIK 8 VKIPVAIK Sbjct: 744 VKIPVAIK 751>NP_005226 Length = 1308 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VKIPVAIK 8 VKIPVAIK Sbjct: 744 VKIPVAIK 751>NP_001276866 Length = 1055 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VKIPVAIK 8 VKIPVAIK Sbjct: 746 VKIPVAIK 753>NP_004439 Length = 1255 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VKIPVAIK 8 VKIPVAIK Sbjct: 746 VKIPVAIK 753>NP_001276865 Length = 1240 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VKIPVAIK 8 VKIPVAIK Sbjct: 731 VKIPVAIK 738>NP_001005862 Length = 1225 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VKIPVAIK 8 VKIPVAIK Sbjct: 716 VKIPVAIK 723>XP_005257197 Length = 1225 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VKIPVAIK 8 VKIPVAIK Sbjct: 716 VKIPVAIK 723>XP_006721828 Length = 1336 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VKIPVAIK 8 VKIPVAIK Sbjct: 827 VKIPVAIK 834>XP_005246434 Length = 1282 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VKIPVAIK 8 VKIPVAIK Sbjct: 734 VKIPVAIK 741>XP_005246433 Length = 1298 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VKIPVAIK 8 VKIPVAIK Sbjct: 734 VKIPVAIK 741>XP_005246432 Length = 1307 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VKIPVAIK 8 VKIPVAIK Sbjct: 759 VKIPVAIK 766>XP_006712427 Length = 1323 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VKIPVAIK 8 VKIPVAIK Sbjct: 759 VKIPVAIK 766>NP_775926 Length = 334 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KIPVAIKT 9 +IPVAIKT Sbjct: 143 EIPVAIKT 150>NP_001265229 Length = 398 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KIPVAIKT 9 +IPVAIKT Sbjct: 143 EIPVAIKT 150>NP_001073917 Length = 1130 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KIPVAIKT 9 +IPVAIKT Sbjct: 751 EIPVAIKT 758>NP_937784 Length = 914 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VKIPVAIKT 9 VKIPVA+ T Sbjct: 760 VKIPVALDT 768>XP_006713657 Length = 496 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KIPVAIKT 9 +IPVAIKT Sbjct: 117 EIPVAIKT 124>XP_006713656 Length = 496 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KIPVAIKT 9 +IPVAIKT Sbjct: 117 EIPVAIKT 124>XP_006713655 Length = 1146 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KIPVAIKT 9 +IPVAIKT Sbjct: 767 EIPVAIKT 774>NP_004422 Length = 976 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KIPVAIKT 9 ++PVAIKT Sbjct: 640 EVPVAIKT 647>XP_005245809 Length = 922 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KIPVAIKT 9 ++PVAIKT Sbjct: 586 EVPVAIKT 593>XP_005245808 Length = 965 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KIPVAIKT 9 ++PVAIKT Sbjct: 629 EVPVAIKT 636>NP_001973 Length = 1342 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VKIPVAIK 8 +KIPV IK Sbjct: 735 IKIPVCIK 742>NP_001268695 Length = 1016 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KIPVAIKT 9 ++PVAIKT Sbjct: 680 ELPVAIKT 687>NP_872272 Length = 1015 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KIPVAIKT 9 ++PVAIKT Sbjct: 679 ELPVAIKT 686>NP_004430 Length = 1037 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KIPVAIKT 9 ++PVAIKT Sbjct: 701 ELPVAIKT 708>NP_001268694 Length = 1038 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KIPVAIKT 9 ++PVAIKT Sbjct: 702 ELPVAIKT 709>NP_001268696 Length = 1004 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KIPVAIKT 9 ++PVAIKT Sbjct: 702 ELPVAIKT 709>XP_005265710 Length = 874 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KIPVAIKT 9 ++PVAIKT Sbjct: 538 ELPVAIKT 545>NP_056327 Length = 4265 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IPVAIKT 9 IPVAI+T Sbjct: 3447 IPVAIRT 3453>NP_079463 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KIPVAIK 8 KIP+AIK Sbjct: 328 KIPLAIK 334>XP_005256234 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KIPVAIK 8 KIP+AIK Sbjct: 328 KIPLAIK 334>XP_005256235 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KIPVAIK 8 KIP+AIK Sbjct: 328 KIPLAIK 334>XP_006721347 Length = 519 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KIPVAIK 8 KIP+AIK Sbjct: 425 KIPLAIK 431>XP_006713163 Length = 4265 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IPVAIKT 9 IPVAI+T Sbjct: 3447 IPVAIRT 3453>NP_001787 Length = 799 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KIPVAIK 8 ++PVAIK Sbjct: 479 RVPVAIK 485>NP_001788 Length = 796 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KIPVAIK 8 K+PVAI+ Sbjct: 471 KVPVAIR 477>XP_005255824 Length = 560 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KIPVAIK 8 K+PVAI+ Sbjct: 471 KVPVAIR 477>XP_005255823 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KIPVAIK 8 K+PVAI+ Sbjct: 471 KVPVAIR 477>XP_005255821 Length = 693 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KIPVAIK 8 K+PVAI+ Sbjct: 471 KVPVAIR 477>XP_005255820 Length = 796 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KIPVAIK 8 K+PVAI+ Sbjct: 471 KVPVAIR 477>XP_005255819 Length = 796 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KIPVAIK 8 K+PVAI+ Sbjct: 471 KVPVAIR 477>XP_005255818 Length = 796 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KIPVAIK 8 K+PVAI+ Sbjct: 471 KVPVAIR 477>XP_005255817 Length = 711 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KIPVAIK 8 ++PVAIK Sbjct: 479 RVPVAIK 485>XP_005255816 Length = 799 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KIPVAIK 8 ++PVAIK Sbjct: 479 RVPVAIK 485>NP_003841 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VKIPVAIK 8 +KIPV ++ Sbjct: 400 IKIPVVVR 407>NP_004647 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VKIPVAIKT 9 + IP++IKT Sbjct: 459 LSIPLSIKT 467>NP_004813 Length = 604 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VKIPVAIKT 9 +KIPVA T Sbjct: 452 IKIPVAPPT 460>NP_060318 Length = 1096 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKIPVAIK 8 +KIPV I+ Sbjct: 633 IKIPVCIE 640>NP_002022 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 PVAIKT 9 PVA+KT Sbjct: 258 PVAVKT 263>NP_002941 Length = 607 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VKIPVAI 7 VK+PVA+ Sbjct: 115 VKLPVAL 121>XP_005262078 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKIPVAIK 8 +KIPV I+ Sbjct: 633 IKIPVCIE 640>XP_006724652 Length = 957 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VKIPVAIK 8 +KIPV I+ Sbjct: 633 IKIPVCIE 640>XP_006721658 Length = 604 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VKIPVAIKT 9 +KIPVA T Sbjct: 452 IKIPVAPPT 460>XP_005266938 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 PVAIKT 9 PVA+KT Sbjct: 258 PVAVKT 263>XP_005266939 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 PVAIKT 9 PVA+KT Sbjct: 258 PVAVKT 263>XP_005266937 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 PVAIKT 9 PVA+KT Sbjct: 258 PVAVKT 263Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.137 0.359 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 527,263 Number of extensions: 634 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |