Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 20 390 XP_006716142 20 390 XP_005250088 20 390 XP_006716141 20 390 XP_005250085 20 390 XP_006716140 20 390 XP_005250084 20 390 XP_005250083 20 390 XP_005250082 20 390 NP_003473 18 1135 XP_006719679 18 1135 XP_005269219 18 1135 XP_006719678 18 1135 XP_006719677 18 1135 NP_001244126 17 3301 NP_003581 17 3301 NP_001244127 17 3301 NP_001499 17 3301 XP_006712863 17 3301 NP_001184033 17 4312 NP_005924 17 4312 NP_001137499 17 4312 NP_055249 17 4312 NP_001137500 17 4312 NP_001137498 17 4312 XP_006718903 17 4312 XP_006718902 17 4312 XP_006718453 17 4312 XP_006717120 17 4312 XP_006717119 17 4312 XP_005266123 17 4312 NP_751951 16 5631 NP_000932 16 5631 NP_001135916 16 5631 NP_001135915 16 5631 NP_620636 16 5631 NP_079359 16 5631 NP_003062 16 5631 NP_057105 16 5631 XP_005247781 16 5631 NP_005426 16 7355 NP_694945 16 7355 NP_004144 16 7355 NP_079037 16 7355 NP_055542 16 7355 NP_570719 16 7355 NP_001177748 16 7355 NP_958805 16 7355 NP_001177747 16 7355 XP_006726519 16 7355 XP_006723578 16 7355 XP_006723577 16 7355 XP_006723576 16 7355 XP_005260064 16 7355 XP_005260063 16 7355 XP_005260062 16 7355 XP_005260061 16 7355 XP_006716191 16 7355 XP_006716190 16 7355 XP_006710443 16 7355 NP_660322 16 7355 NP_001121132 15 9605 NP_055689 15 9605 NP_001159743 15 9605 NP_001273721 15 9605 NP_079172 15 9605 NP_001273723 15 9605 NP_001273724 15 9605 NP_694568 15 9605 NP_001138600 15 9605 NP_002009 15 9605 NP_001243193 15 9605 NP_001243194 15 9605 XP_005256615 15 9605 XP_005256613 15 9605 XP_005256612 15 9605 XP_005251644 15 9605 XP_006715439 15 9605 XP_005263605 15 9605 XP_005263604 15 9605 XP_005263602 15 9605 XP_005263600 15 9605>NP_733751 Length = 4911 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VFRRVYVQ 8 VFRRVYVQ Sbjct: 4521 VFRRVYVQ 4528>XP_006716142 Length = 4927 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VFRRVYVQ 8 VFRRVYVQ Sbjct: 4537 VFRRVYVQ 4544>XP_005250088 Length = 4928 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VFRRVYVQ 8 VFRRVYVQ Sbjct: 4538 VFRRVYVQ 4545>XP_006716141 Length = 4959 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VFRRVYVQ 8 VFRRVYVQ Sbjct: 4569 VFRRVYVQ 4576>XP_005250085 Length = 4979 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VFRRVYVQ 8 VFRRVYVQ Sbjct: 4593 VFRRVYVQ 4600>XP_006716140 Length = 4982 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VFRRVYVQ 8 VFRRVYVQ Sbjct: 4592 VFRRVYVQ 4599>XP_005250084 Length = 4982 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VFRRVYVQ 8 VFRRVYVQ Sbjct: 4592 VFRRVYVQ 4599>XP_005250083 Length = 4982 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VFRRVYVQ 8 VFRRVYVQ Sbjct: 4592 VFRRVYVQ 4599>XP_005250082 Length = 4983 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 VFRRVYVQ 8 VFRRVYVQ Sbjct: 4593 VFRRVYVQ 4600>NP_003473 Length = 5537 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VFRRVYVQ 8 VFRRVY++ Sbjct: 5151 VFRRVYIE 5158>XP_006719679 Length = 5536 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VFRRVYVQ 8 VFRRVY++ Sbjct: 5150 VFRRVYIE 5157>XP_005269219 Length = 5537 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VFRRVYVQ 8 VFRRVY++ Sbjct: 5151 VFRRVYIE 5158>XP_006719678 Length = 5539 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VFRRVYVQ 8 VFRRVY++ Sbjct: 5153 VFRRVYIE 5160>XP_006719677 Length = 5540 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VFRRVYVQ 8 VFRRVY++ Sbjct: 5154 VFRRVYIE 5161>NP_001244126 Length = 702 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 VFRRVYVQH 9 VF R Y QH Sbjct: 361 VFERYYKQH 369>NP_003581 Length = 768 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 VFRRVYVQH 9 VF R Y QH Sbjct: 427 VFERYYKQH 435>NP_001244127 Length = 774 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 VFRRVYVQH 9 VF R Y QH Sbjct: 433 VFERYYKQH 441>NP_001499 Length = 453 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FRRVYVQ 8 FRRV+VQ Sbjct: 351 FRRVFVQ 357>XP_006712863 Length = 795 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 VFRRVYVQH 9 VF R Y QH Sbjct: 454 VFERYYKQH 462>NP_001184033 Length = 3972 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VFRRVYV 7 VFRRV+V Sbjct: 1996 VFRRVFV 2002>NP_005924 Length = 3969 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VFRRVYV 7 VFRRV+V Sbjct: 1993 VFRRVFV 1999>NP_001137499 Length = 521 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RRVYVQH 9 ++VYVQH Sbjct: 486 QKVYVQH 492>NP_055249 Length = 597 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RRVYVQH 9 ++VYVQH Sbjct: 520 QKVYVQH 526>NP_001137500 Length = 590 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RRVYVQH 9 ++VYVQH Sbjct: 513 QKVYVQH 519>NP_001137498 Length = 606 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RRVYVQH 9 ++VYVQH Sbjct: 529 QKVYVQH 535>XP_006718903 Length = 2673 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VFRRVYV 7 VFRRV+V Sbjct: 697 VFRRVFV 703>XP_006718902 Length = 2964 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 VFRRVYV 7 VFRRV+V Sbjct: 988 VFRRVFV 994>XP_006718453 Length = 397 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RRVYVQH 9 RR+Y QH Sbjct: 314 RRIYKQH 320>XP_006717120 Length = 555 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RRVYVQH 9 ++VYVQH Sbjct: 478 QKVYVQH 484>XP_006717119 Length = 615 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RRVYVQH 9 ++VYVQH Sbjct: 538 QKVYVQH 544>XP_005266123 Length = 624 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RRVYVQH 9 ++VYVQH Sbjct: 547 QKVYVQH 553>NP_751951 Length = 123 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VFRRVYVQH 9 VFRR+++ + Sbjct: 14 VFRRIFITY 22>NP_000932 Length = 680 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RVYVQH 9 +VYVQH Sbjct: 605 KVYVQH 610>NP_001135916 Length = 508 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VFRRVYVQH 9 V+RR+ V H Sbjct: 257 VYRRIIVPH 265>NP_001135915 Length = 508 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VFRRVYVQH 9 V+RR+ V H Sbjct: 257 VYRRIIVPH 265>NP_620636 Length = 1009 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RRVYVQH 9 R+V++QH Sbjct: 661 RKVFIQH 667>NP_079359 Length = 508 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VFRRVYVQH 9 V+RR+ V H Sbjct: 257 VYRRIIVPH 265>NP_003062 Length = 1009 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RRVYVQH 9 R+V++QH Sbjct: 661 RKVFIQH 667>NP_057105 Length = 318 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VFRRVYV 7 +FRR+Y+ Sbjct: 302 IFRRIYL 308>XP_005247781 Length = 1008 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RRVYVQH 9 R+V++QH Sbjct: 660 RKVFIQH 666>NP_005426 Length = 1597 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FRRVYVQH 9 FRRVY+ + Sbjct: 1260 FRRVYLPY 1267>NP_694945 Length = 802 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FRRVYVQH 9 FRRVY+ + Sbjct: 462 FRRVYLPY 469>NP_004144 Length = 861 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 FRRVYVQH 9 F+++Y QH Sbjct: 795 FQQIYSQH 802>NP_079037 Length = 216 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VFRRVYVQH 9 VF VY+ H Sbjct: 161 VFVHVYIHH 169>NP_055542 Length = 2715 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VFRRVYV 7 V RRVYV Sbjct: 1702 VLRRVYV 1708>NP_570719 Length = 217 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VFRRVYVQH 9 VF VY+ H Sbjct: 162 VFVHVYIHH 170>NP_001177748 Length = 856 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 FRRVYVQH 9 F+++Y QH Sbjct: 790 FQQIYSQH 797>NP_958805 Length = 216 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VFRRVYVQH 9 VF VY+ H Sbjct: 161 VFVHVYIHH 169>NP_001177747 Length = 861 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 FRRVYVQH 9 F+++Y QH Sbjct: 795 FQQIYSQH 802>XP_006726519 Length = 1493 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FRRVYVQH 9 FRRVY+ + Sbjct: 1241 FRRVYLPY 1248>XP_006723578 Length = 1077 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VFRRVYV 7 V RRVYV Sbjct: 64 VLRRVYV 70>XP_006723577 Length = 1951 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VFRRVYV 7 V RRVYV Sbjct: 938 VLRRVYV 944>XP_006723576 Length = 2313 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VFRRVYV 7 V RRVYV Sbjct: 1702 VLRRVYV 1708>XP_005260064 Length = 1699 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 RVYVQH 9 R YVQH Sbjct: 414 RAYVQH 419>XP_005260063 Length = 1756 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 RVYVQH 9 R YVQH Sbjct: 414 RAYVQH 419>XP_005260062 Length = 1832 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 RVYVQH 9 R YVQH Sbjct: 414 RAYVQH 419>XP_005260061 Length = 1889 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 RVYVQH 9 R YVQH Sbjct: 414 RAYVQH 419>XP_006716191 Length = 1543 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FRRVYVQH 9 FRRVY+ + Sbjct: 1260 FRRVYLPY 1267>XP_006716190 Length = 1597 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FRRVYVQH 9 FRRVY+ + Sbjct: 1260 FRRVYLPY 1267>XP_006710443 Length = 239 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VFRRVYVQH 9 VF VY+ H Sbjct: 184 VFVHVYIHH 192>NP_660322 Length = 268 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 VFRRVYVQH 9 VF VY+ H Sbjct: 213 VFVHVYIHH 221>NP_001121132 Length = 757 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 FRRVYVQH 9 F+R +V+H Sbjct: 661 FKRQFVEH 668>NP_055689 Length = 757 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 FRRVYVQH 9 F+R +V+H Sbjct: 661 FKRQFVEH 668>NP_001159743 Length = 1277 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RVYVQH 9 RVY++H Sbjct: 878 RVYIKH 883>NP_001273721 Length = 1339 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RVYVQH 9 RVY++H Sbjct: 940 RVYIKH 945>NP_079172 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RRVYVQH 9 +RV++QH Sbjct: 684 KRVFLQH 690>NP_001273723 Length = 596 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RVYVQH 9 RVY++H Sbjct: 197 RVYIKH 202>NP_001273724 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RVYVQH 9 RVY++H Sbjct: 175 RVYIKH 180>NP_694568 Length = 652 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RVYVQH 9 RVY++H Sbjct: 253 RVYIKH 258>NP_001138600 Length = 1911 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VFRRVYVQ 8 +F R+Y+Q Sbjct: 670 LFNRIYLQ 677>NP_002009 Length = 1269 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RVYVQH 9 +VY+QH Sbjct: 1225 QVYIQH 1230>NP_001243193 Length = 1258 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RVYVQH 9 +VY+QH Sbjct: 1214 QVYIQH 1219>NP_001243194 Length = 1214 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RVYVQH 9 +VY+QH Sbjct: 1170 QVYIQH 1175>XP_005256615 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RVYVQH 9 +VY+QH Sbjct: 1224 QVYIQH 1229>XP_005256613 Length = 1295 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RVYVQH 9 +VY+QH Sbjct: 1251 QVYIQH 1256>XP_005256612 Length = 1296 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 RVYVQH 9 +VY+QH Sbjct: 1252 QVYIQH 1257>XP_005251644 Length = 782 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RRVYVQH 9 +RV++QH Sbjct: 562 KRVFLQH 568>XP_006715439 Length = 1911 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VFRRVYVQ 8 +F R+Y+Q Sbjct: 670 LFNRIYLQ 677>XP_005263605 Length = 757 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 FRRVYVQH 9 F+R +V+H Sbjct: 661 FKRQFVEH 668>XP_005263604 Length = 757 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 FRRVYVQH 9 F+R +V+H Sbjct: 661 FKRQFVEH 668>XP_005263602 Length = 757 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 FRRVYVQH 9 F+R +V+H Sbjct: 661 FKRQFVEH 668>XP_005263600 Length = 757 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 FRRVYVQH 9 F+R +V+H Sbjct: 661 FKRQFVEH 668Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.351 0.153 0.495 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 498,254 Number of extensions: 1003 Number of successful extensions: 82 Number of sequences better than 10000.0: 82 Number of HSP's gapped: 82 Number of HSP's successfully gapped: 82 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.9 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |