Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 19 869 XP_006718908 19 869 XP_005271621 19 869 XP_006718907 19 869 XP_006718906 19 869 XP_005271619 19 869 XP_005271618 19 869 NP_001230075 17 2528 NP_002524 17 2528 NP_001230076 17 2528 NP_996671 17 2528 NP_006265 17 2528 XP_006711841 17 2528 XP_006711840 17 2528 XP_006711839 17 2528 XP_006711838 17 2528 XP_006711837 17 2528 XP_006711836 17 2528 XP_006711835 17 2528 NP_653299 16 7355 NP_001267728 16 7355 NP_001243353 16 7355 NP_000846 16 7355 XP_005254022 16 7355 XP_006719716 16 7355 XP_006719715 16 7355 XP_005254020 16 7355 XP_005254019 16 7355 NP_116052 16 7355 NP_002237 15 9605 NP_001012241 15 9605 NP_001156467 15 9605 XP_006722076 15 9605 XP_005257356 15 9605 XP_005257355 15 9605 XP_005269019 15 9605 NP_057572 15 9605 NP_001137259 15 9605>NP_000042 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ERVLMRLQ 9 ERVLMRLQ Sbjct: 3007 ERVLMRLQ 3014>XP_006718908 Length = 1708 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ERVLMRLQ 9 ERVLMRLQ Sbjct: 1659 ERVLMRLQ 1666>XP_005271621 Length = 2708 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ERVLMRLQ 9 ERVLMRLQ Sbjct: 2659 ERVLMRLQ 2666>XP_006718907 Length = 3050 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ERVLMRLQ 9 ERVLMRLQ Sbjct: 3001 ERVLMRLQ 3008>XP_006718906 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ERVLMRLQ 9 ERVLMRLQ Sbjct: 3007 ERVLMRLQ 3014>XP_005271619 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ERVLMRLQ 9 ERVLMRLQ Sbjct: 3007 ERVLMRLQ 3014>XP_005271618 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ERVLMRLQ 9 ERVLMRLQ Sbjct: 3007 ERVLMRLQ 3014>NP_001230075 Length = 667 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VERVLMRLQ 9 V RVLM+LQ Sbjct: 297 VNRVLMKLQ 305>NP_002524 Length = 856 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VERVLMRLQ 9 V RVLM+LQ Sbjct: 486 VNRVLMKLQ 494>NP_001230076 Length = 765 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VERVLMRLQ 9 V RVLM+LQ Sbjct: 395 VNRVLMKLQ 403>NP_996671 Length = 750 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VERVLMRLQ 9 V RVLM+LQ Sbjct: 380 VNRVLMKLQ 388>NP_006265 Length = 98 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VERVLMRLQ 9 VER++ RLQ Sbjct: 79 VERIIQRLQ 87>XP_006711841 Length = 592 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VERVLMRLQ 9 V RVLM+LQ Sbjct: 222 VNRVLMKLQ 230>XP_006711840 Length = 640 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VERVLMRLQ 9 V RVLM+LQ Sbjct: 270 VNRVLMKLQ 278>XP_006711839 Length = 695 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VERVLMRLQ 9 V RVLM+LQ Sbjct: 486 VNRVLMKLQ 494>XP_006711838 Length = 728 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VERVLMRLQ 9 V RVLM+LQ Sbjct: 486 VNRVLMKLQ 494>XP_006711837 Length = 738 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VERVLMRLQ 9 V RVLM+LQ Sbjct: 368 VNRVLMKLQ 376>XP_006711836 Length = 738 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VERVLMRLQ 9 V RVLM+LQ Sbjct: 368 VNRVLMKLQ 376>XP_006711835 Length = 828 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 VERVLMRLQ 9 V RVLM+LQ Sbjct: 486 VNRVLMKLQ 494>NP_653299 Length = 1001 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VERVLMRLQ 9 +ERVL RL+ Sbjct: 541 LERVLARLE 549>NP_001267728 Length = 911 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VERVLMRLQ 9 +ERVL RL+ Sbjct: 451 LERVLARLE 459>NP_001243353 Length = 763 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ERVLMRL 8 ERVL+RL Sbjct: 376 ERVLLRL 382>NP_000846 Length = 732 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ERVLMRL 8 ERVL+RL Sbjct: 376 ERVLLRL 382>XP_005254022 Length = 456 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ERVLMRLQ 9 ERVL R+Q Sbjct: 439 ERVLSRMQ 446>XP_006719716 Length = 486 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ERVLMRLQ 9 ERVL R+Q Sbjct: 469 ERVLSRMQ 476>XP_006719715 Length = 486 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ERVLMRLQ 9 ERVL R+Q Sbjct: 469 ERVLSRMQ 476>XP_005254020 Length = 491 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ERVLMRLQ 9 ERVL R+Q Sbjct: 474 ERVLSRMQ 481>XP_005254019 Length = 516 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ERVLMRLQ 9 ERVL R+Q Sbjct: 499 ERVLSRMQ 506>NP_116052 Length = 517 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ERVLMRLQ 9 ERVL R+Q Sbjct: 500 ERVLSRMQ 507>NP_002237 Length = 394 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 VERVLMRLQ 9 +ERV++RL+ Sbjct: 62 LERVVLRLK 70>NP_001012241 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ERVLMRLQ 9 +R+L RLQ Sbjct: 265 QRILQRLQ 272>NP_001156467 Length = 77 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ERVLMRLQ 9 ER+L++LQ Sbjct: 15 ERLLLKLQ 22>XP_006722076 Length = 77 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ERVLMRLQ 9 ER+L++LQ Sbjct: 15 ERLLLKLQ 22>XP_005257356 Length = 598 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ERVLMRLQ 9 +R+L RLQ Sbjct: 512 QRILQRLQ 519>XP_005257355 Length = 614 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ERVLMRLQ 9 +R+L RLQ Sbjct: 528 QRILQRLQ 535>XP_005269019 Length = 409 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ERVLMRLQ 9 ER+L+R Q Sbjct: 372 ERILLRTQ 379>NP_057572 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ERVLMRLQ 9 ER+L+R Q Sbjct: 421 ERILLRTQ 428>NP_001137259 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ERVLMRLQ 9 ER+L+R Q Sbjct: 397 ERILLRTQ 404Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.342 0.148 0.360 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 350,239 Number of extensions: 759 Number of successful extensions: 38 Number of sequences better than 10000.0: 38 Number of HSP's gapped: 38 Number of HSP's successfully gapped: 38 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |