Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 21 229 NP_001075109 21 229 NP_653258 17 3301 NP_001170949 17 3301 NP_001170950 17 3301 XP_006724682 17 3301 XP_005262138 17 3301 NP_005870 17 3301 NP_000375 16 5631 NP_570824 16 5631 NP_055325 16 5631 NP_149015 16 5631 NP_003072 16 5631 XP_006723677 16 5631 XP_005260867 16 5631 XP_005260865 16 5631 XP_006715989 16 5631 NP_001367 16 7355 NP_001002814 16 7355 NP_079427 16 7355 NP_055826 16 7355 NP_001185879 16 7355 NP_055719 16 7355 NP_116253 16 7355 NP_001274324 16 7355 XP_005269686 16 7355 XP_006712547 16 7355 XP_005245779 16 7355 XP_005245778 16 7355 XP_005245777 16 7355 XP_005245776 16 7355 XP_005245775 16 7355 XP_005245774 16 7355 NP_005830 16 7355 NP_060660 15 9605 NP_004645 15 9605 NP_055196 15 9605 NP_001035197 15 9605 NP_078863 15 9605 NP_057454 15 9605 NP_055178 15 9605 NP_001264984 15 9605 NP_789794 15 9605 NP_004242 15 9605 NP_059115 15 9605 NP_001182257 15 9605 XP_006724722 15 9605 XP_006724721 15 9605 XP_006720180 15 9605 XP_005267590 15 9605 XP_005267589 15 9605 XP_005267588 15 9605 XP_006720179 15 9605 XP_005266395 15 9605 XP_005263163 15 9605 XP_005271253 15 9605 XP_005271252 15 9605 XP_005271251 15 9605>NP_008835 Length = 4128 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VEFMRNELE 9 VEF+RNELE Sbjct: 3692 VEFLRNELE 3700>NP_001075109 Length = 4097 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VEFMRNELE 9 VEF+RNELE Sbjct: 3692 VEFLRNELE 3700>NP_653258 Length = 690 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VEFMRNELE 9 V+F+ NELE Sbjct: 612 VKFIENELE 620>NP_001170949 Length = 632 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VEFMRNELE 9 V+F+ NELE Sbjct: 554 VKFIENELE 562>NP_001170950 Length = 690 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VEFMRNELE 9 V+F+ NELE Sbjct: 612 VKFIENELE 620>XP_006724682 Length = 632 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VEFMRNELE 9 V+F+ NELE Sbjct: 554 VKFIENELE 562>XP_005262138 Length = 690 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VEFMRNELE 9 V+F+ NELE Sbjct: 612 VKFIENELE 620>NP_005870 Length = 469 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EFMRNELE 9 EF++NEL+ Sbjct: 77 EFLKNELD 84>NP_000375 Length = 4563 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EFMRNELE 9 EF++NEL+ Sbjct: 4361 EFIQNELQ 4368>NP_570824 Length = 206 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 MRNELE 9 MRNELE Sbjct: 7 MRNELE 12>NP_055325 Length = 4935 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EFMRNELE 9 EF+RN+L+ Sbjct: 1576 EFIRNQLK 1583>NP_149015 Length = 5142 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EFMRNELE 9 EF+RN+L+ Sbjct: 1576 EFIRNQLK 1583>NP_003072 Length = 206 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 MRNELE 9 MRNELE Sbjct: 7 MRNELE 12>XP_006723677 Length = 136 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 MRNELE 9 MRNELE Sbjct: 7 MRNELE 12>XP_005260867 Length = 206 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 MRNELE 9 MRNELE Sbjct: 7 MRNELE 12>XP_005260865 Length = 206 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 MRNELE 9 MRNELE Sbjct: 7 MRNELE 12>XP_006715989 Length = 5148 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EFMRNELE 9 EF+RN+L+ Sbjct: 1576 EFIRNQLK 1583>NP_001367 Length = 4646 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VEFMRNELE 9 VE +RNEL+ Sbjct: 3409 VEPLRNELQ 3417>NP_001002814 Length = 1283 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VEFMRNEL 8 ++FMRN + Sbjct: 146 IQFMRNNM 153>NP_079427 Length = 649 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VEFMRNEL 8 ++FMRN + Sbjct: 146 IQFMRNNM 153>NP_055826 Length = 1858 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 EFMRNELE 9 EF +NE E Sbjct: 784 EFQKNEFE 791>NP_001185879 Length = 1880 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 EFMRNELE 9 EF +NE E Sbjct: 806 EFQKNEFE 813>NP_055719 Length = 512 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VEFMRNEL 8 ++FMRN + Sbjct: 140 IQFMRNNM 147>NP_116253 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VEFMRNE 7 VEF++NE Sbjct: 88 VEFIKNE 94>NP_001274324 Length = 1688 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VEFMRNELE 9 ++F+RN L+ Sbjct: 650 IQFLRNSLK 658>XP_005269686 Length = 532 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 VEFMRNEL 8 ++FMRN + Sbjct: 140 IQFMRNNM 147>XP_006712547 Length = 1674 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 VEFMRNELE 9 ++F+RN L+ Sbjct: 647 IQFLRNSLK 655>XP_005245779 Length = 888 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VEFMRNELE 9 +EF+ N+LE Sbjct: 68 IEFIFNQLE 76>XP_005245778 Length = 902 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VEFMRNELE 9 +EF+ N+LE Sbjct: 68 IEFIFNQLE 76>XP_005245777 Length = 915 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VEFMRNELE 9 +EF+ N+LE Sbjct: 68 IEFIFNQLE 76>XP_005245776 Length = 916 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VEFMRNELE 9 +EF+ N+LE Sbjct: 68 IEFIFNQLE 76>XP_005245775 Length = 917 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VEFMRNELE 9 +EF+ N+LE Sbjct: 68 IEFIFNQLE 76>XP_005245774 Length = 918 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VEFMRNELE 9 +EF+ N+LE Sbjct: 68 IEFIFNQLE 76>NP_005830 Length = 904 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VEFMRNELE 9 +EF+ N+LE Sbjct: 68 IEFIFNQLE 76>NP_060660 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VEFMRNELE 9 + +RNELE Sbjct: 342 ISSLRNELE 350>NP_004645 Length = 2555 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VEFMRNELE 9 V+FM N L+ Sbjct: 1997 VKFMHNRLQ 2005>NP_055196 Length = 1429 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EFMRNELE 9 EF+R +LE Sbjct: 1306 EFIREQLE 1313>NP_001035197 Length = 1453 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EFMRNELE 9 EF+R +LE Sbjct: 1330 EFIREQLE 1337>NP_078863 Length = 277 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VEFMRN 6 V+FMRN Sbjct: 268 VDFMRN 273>NP_057454 Length = 201 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VEFMRNELE 9 VEF+ +LE Sbjct: 42 VEFLNRDLE 50>NP_055178 Length = 4579 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VEFMRN 6 VEF+RN Sbjct: 3583 VEFLRN 3588>NP_001264984 Length = 4432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VEFMRN 6 VEF+RN Sbjct: 3436 VEFLRN 3441>NP_789794 Length = 715 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VEFMRNELE 9 + +RNELE Sbjct: 342 ISSLRNELE 350>NP_004242 Length = 201 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VEFMRNELE 9 VEF+ +LE Sbjct: 42 VEFLNKDLE 50>NP_059115 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VEFMRNE 7 VEF+RN+ Sbjct: 167 VEFIRNK 173>NP_001182257 Length = 201 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VEFMRNELE 9 VEF+ +LE Sbjct: 42 VEFLNKDLE 50>XP_006724722 Length = 201 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VEFMRNELE 9 VEF+ +LE Sbjct: 42 VEFLNRDLE 50>XP_006724721 Length = 201 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VEFMRNELE 9 VEF+ +LE Sbjct: 42 VEFLNRDLE 50>XP_006720180 Length = 269 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EFMRNELE 9 EF+R +LE Sbjct: 146 EFIREQLE 153>XP_005267590 Length = 1394 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EFMRNELE 9 EF+R +LE Sbjct: 1271 EFIREQLE 1278>XP_005267589 Length = 1418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EFMRNELE 9 EF+R +LE Sbjct: 1295 EFIREQLE 1302>XP_005267588 Length = 1453 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EFMRNELE 9 EF+R +LE Sbjct: 1330 EFIREQLE 1337>XP_006720179 Length = 1453 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EFMRNELE 9 EF+R +LE Sbjct: 1330 EFIREQLE 1337>XP_005266395 Length = 4588 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VEFMRN 6 VEF+RN Sbjct: 3592 VEFLRN 3597>XP_005263163 Length = 716 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VEFMRNELE 9 + +RNELE Sbjct: 343 ISSLRNELE 351>XP_005271253 Length = 204 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VEFMRN 6 V+FMRN Sbjct: 195 VDFMRN 200>XP_005271252 Length = 246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VEFMRN 6 V+FMRN Sbjct: 237 VDFMRN 242>XP_005271251 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 VEFMRN 6 V+FMRN Sbjct: 238 VDFMRN 243Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.137 0.352 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 479,092 Number of extensions: 922 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |