Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005148 19 665 NP_009297 19 665 NP_001360 17 3301 XP_005248319 17 3301 NP_001268639 16 5631 NP_001268640 16 5631 NP_055638 16 5631 NP_998820 16 5631 NP_001171914 16 5631 NP_061852 16 5631 NP_056156 16 5631 NP_001268641 16 5631 XP_006719067 16 5631 XP_006719066 16 5631 XP_005253800 16 5631 XP_005253798 16 5631 XP_005253797 16 5631 XP_005253796 16 5631 XP_006719065 16 5631 XP_006719064 16 5631 XP_006719063 16 5631 XP_006719062 16 5631 XP_005253795 16 5631 XP_005253794 16 5631 XP_005253793 16 5631 XP_005253792 16 5631 XP_006719061 16 5631 XP_005253791 16 5631 XP_006712451 16 5631 XP_005263965 16 5631 XP_005263964 16 5631 NP_001188386 15 9605 NP_938207 15 9605 NP_112562 15 9605 NP_872286 15 9605 NP_055949 15 9605 NP_958431 15 9605 NP_872282 15 9605 XP_006722041 15 9605 XP_005257576 15 9605 XP_006722040 15 9605 XP_006722039 15 9605 XP_005257575 15 9605 XP_005256621 15 9605 XP_006721553 15 9605 XP_006721552 15 9605 XP_006721551 15 9605 XP_006721550 15 9605 XP_005256620 15 9605 XP_005267776 15 9605 XP_005267775 15 9605 XP_006720219 15 9605 XP_005267773 15 9605>NP_005148 Length = 1130 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VDAVNSDVA 9 VDAVNSD A Sbjct: 938 VDAVNSDAA 946>NP_009297 Length = 1149 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VDAVNSDVA 9 VDAVNSD A Sbjct: 957 VDAVNSDAA 965>NP_001360 Length = 4624 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDAVNSDVA 9 +D +NSD+A Sbjct: 3045 IDEINSDLA 3053>XP_005248319 Length = 4609 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VDAVNSDVA 9 +D +NSD+A Sbjct: 3030 IDEINSDLA 3038>NP_001268639 Length = 730 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VDAVNSDV 8 VDAV++DV Sbjct: 158 VDAVHADV 165>NP_001268640 Length = 717 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VDAVNSDV 8 VDAV++DV Sbjct: 145 VDAVHADV 152>NP_055638 Length = 2134 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDAVNSDVA 9 VD+ +SDVA Sbjct: 821 VDSAHSDVA 829>NP_998820 Length = 2634 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDAVNSDVA 9 VD+ +SDVA Sbjct: 1320 VDSAHSDVA 1328>NP_001171914 Length = 2642 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDAVNSDVA 9 VD+ +SDVA Sbjct: 1328 VDSAHSDVA 1336>NP_061852 Length = 2382 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDAVNSDVA 9 VD+ +SDVA Sbjct: 1068 VDSAHSDVA 1076>NP_056156 Length = 741 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VDAVNSDV 8 VDAV++DV Sbjct: 169 VDAVHADV 176>NP_001268641 Length = 605 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VDAVNSDV 8 VDAV++DV Sbjct: 33 VDAVHADV 40>XP_006719067 Length = 2228 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDAVNSDVA 9 VD+ +SDVA Sbjct: 914 VDSAHSDVA 922>XP_006719066 Length = 2381 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDAVNSDVA 9 VD+ +SDVA Sbjct: 1067 VDSAHSDVA 1075>XP_005253800 Length = 2013 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDAVNSDVA 9 VD+ +SDVA Sbjct: 661 VDSAHSDVA 669>XP_005253798 Length = 2145 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDAVNSDVA 9 VD+ +SDVA Sbjct: 793 VDSAHSDVA 801>XP_005253797 Length = 2146 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDAVNSDVA 9 VD+ +SDVA Sbjct: 794 VDSAHSDVA 802>XP_005253796 Length = 2173 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDAVNSDVA 9 VD+ +SDVA Sbjct: 821 VDSAHSDVA 829>XP_006719065 Length = 2174 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDAVNSDVA 9 VD+ +SDVA Sbjct: 822 VDSAHSDVA 830>XP_006719064 Length = 2229 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDAVNSDVA 9 VD+ +SDVA Sbjct: 915 VDSAHSDVA 923>XP_006719063 Length = 2266 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDAVNSDVA 9 VD+ +SDVA Sbjct: 914 VDSAHSDVA 922>XP_006719062 Length = 2267 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDAVNSDVA 9 VD+ +SDVA Sbjct: 915 VDSAHSDVA 923>XP_005253795 Length = 2280 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDAVNSDVA 9 VD+ +SDVA Sbjct: 1068 VDSAHSDVA 1076>XP_005253794 Length = 2391 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDAVNSDVA 9 VD+ +SDVA Sbjct: 1039 VDSAHSDVA 1047>XP_005253793 Length = 2392 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDAVNSDVA 9 VD+ +SDVA Sbjct: 1040 VDSAHSDVA 1048>XP_005253792 Length = 2419 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDAVNSDVA 9 VD+ +SDVA Sbjct: 1068 VDSAHSDVA 1076>XP_006719061 Length = 2419 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDAVNSDVA 9 VD+ +SDVA Sbjct: 1067 VDSAHSDVA 1075>XP_005253791 Length = 2420 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VDAVNSDVA 9 VD+ +SDVA Sbjct: 1068 VDSAHSDVA 1076>XP_006712451 Length = 710 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VDAVNSDV 8 VDAV++DV Sbjct: 169 VDAVHADV 176>XP_005263965 Length = 725 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VDAVNSDV 8 VDAV++DV Sbjct: 169 VDAVHADV 176>XP_005263964 Length = 738 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 VDAVNSDV 8 VDAV++DV Sbjct: 166 VDAVHADV 173>NP_001188386 Length = 1497 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VDAVNS 6 VDAVNS Sbjct: 49 VDAVNS 54>NP_938207 Length = 1491 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VDAVNS 6 VDAVNS Sbjct: 49 VDAVNS 54>NP_112562 Length = 1451 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VDAVNS 6 VDAVNS Sbjct: 49 VDAVNS 54>NP_872286 Length = 443 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VDAVNS 6 VDAVNS Sbjct: 265 VDAVNS 270>NP_055949 Length = 1038 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VDAVNSDV 8 + +VNSDV Sbjct: 795 ISSVNSDV 802>NP_958431 Length = 1025 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VDAVNSDV 8 + +VNSDV Sbjct: 795 ISSVNSDV 802>NP_872282 Length = 468 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VDAVNS 6 VDAVNS Sbjct: 290 VDAVNS 295>XP_006722041 Length = 1445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VDAVNS 6 VDAVNS Sbjct: 52 VDAVNS 57>XP_005257576 Length = 1454 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VDAVNS 6 VDAVNS Sbjct: 52 VDAVNS 57>XP_006722040 Length = 1466 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VDAVNS 6 VDAVNS Sbjct: 52 VDAVNS 57>XP_006722039 Length = 1491 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VDAVNS 6 VDAVNS Sbjct: 49 VDAVNS 54>XP_005257575 Length = 1494 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VDAVNS 6 VDAVNS Sbjct: 52 VDAVNS 57>XP_005256621 Length = 1032 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VDAVNSDV 8 + +VNSDV Sbjct: 789 ISSVNSDV 796>XP_006721553 Length = 2286 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VDAVNSDV 8 + +VNSDV Sbjct: 2096 ISSVNSDV 2103>XP_006721552 Length = 2299 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VDAVNSDV 8 + +VNSDV Sbjct: 2096 ISSVNSDV 2103>XP_006721551 Length = 2301 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VDAVNSDV 8 + +VNSDV Sbjct: 2058 ISSVNSDV 2065>XP_006721550 Length = 2326 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VDAVNSDV 8 + +VNSDV Sbjct: 2096 ISSVNSDV 2103>XP_005256620 Length = 2339 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VDAVNSDV 8 + +VNSDV Sbjct: 2096 ISSVNSDV 2103>XP_005267776 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VDAVNS 6 VDAVNS Sbjct: 110 VDAVNS 115>XP_005267775 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VDAVNS 6 VDAVNS Sbjct: 110 VDAVNS 115>XP_006720219 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VDAVNS 6 VDAVNS Sbjct: 181 VDAVNS 186>XP_005267773 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 VDAVNS 6 VDAVNS Sbjct: 235 VDAVNS 240Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.304 0.118 0.291 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 391,468 Number of extensions: 559 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |