Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004963 21 175 XP_005251512 21 175 NP_543139 17 2528 NP_009041 17 4312 NP_001264268 17 4312 NP_055847 17 4312 XP_005268084 17 4312 XP_005266355 17 4312 XP_005266354 17 4312 XP_005266353 17 4312 XP_005266352 17 4312 XP_005266849 17 4312 NP_001273428 16 5631 NP_001273425 16 5631 NP_079325 16 5631 NP_115714 16 5631 NP_940974 16 5631 NP_001273426 16 5631 NP_060935 16 5631 XP_005251569 16 5631 XP_005251567 16 5631 XP_005250968 16 5631 NP_085150 16 7355 NP_001157968 16 7355 NP_665879 16 7355 XP_005247674 16 7355 XP_006713762 16 7355 XP_006713761 16 7355 XP_006713760 16 7355 XP_006713759 16 7355 XP_006712953 16 7355 XP_006712952 16 7355 XP_006712951 16 7355 NP_057200 16 7355 NP_000282 15 9605 NP_001185574 15 9605 NP_001185573 15 9605 NP_477514 15 9605 NP_001003818 15 9605 NP_001027006 15 9605>NP_004963 Length = 1132 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VAKQLAWSM 9 VAKQLAW+M Sbjct: 653 VAKQLAWAM 661>XP_005251512 Length = 1132 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 VAKQLAWSM 9 VAKQLAW+M Sbjct: 653 VAKQLAWAM 661>NP_543139 Length = 453 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VAKQLAWS 8 V+ QLAWS Sbjct: 90 VSNQLAWS 97>NP_009041 Length = 2627 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VAKQLAW 7 VAKQL W Sbjct: 796 VAKQLYW 802>NP_001264268 Length = 592 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KQLAWSM 9 K+LAW M Sbjct: 402 KELAWEM 408>NP_055847 Length = 1447 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AKQLAW 7 AKQ+AW Sbjct: 430 AKQIAW 435>XP_005268084 Length = 2627 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VAKQLAW 7 VAKQL W Sbjct: 796 VAKQLYW 802>XP_005266355 Length = 1448 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AKQLAW 7 AKQ+AW Sbjct: 430 AKQIAW 435>XP_005266354 Length = 1411 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AKQLAW 7 AKQ+AW Sbjct: 430 AKQIAW 435>XP_005266353 Length = 1445 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AKQLAW 7 AKQ+AW Sbjct: 430 AKQIAW 435>XP_005266352 Length = 1446 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AKQLAW 7 AKQ+AW Sbjct: 430 AKQIAW 435>XP_005266849 Length = 592 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KQLAWSM 9 K+LAW M Sbjct: 402 KELAWEM 408>NP_001273428 Length = 588 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLAWSM 9 QLAW+M Sbjct: 494 QLAWAM 499>NP_001273425 Length = 641 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLAWSM 9 QLAW+M Sbjct: 547 QLAWAM 552>NP_079325 Length = 641 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLAWSM 9 QLAW+M Sbjct: 547 QLAWAM 552>NP_115714 Length = 129 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VAKQLAW 7 VAK LAW Sbjct: 123 VAKGLAW 129>NP_940974 Length = 591 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AKQLAW 7 +KQLAW Sbjct: 437 SKQLAW 442>NP_001273426 Length = 707 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLAWSM 9 QLAW+M Sbjct: 547 QLAWAM 552>NP_060935 Length = 147 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VAKQLAWS 8 +A Q+AWS Sbjct: 43 MAMQIAWS 50>XP_005251569 Length = 114 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VAKQLAWS 8 +A Q+AWS Sbjct: 10 MAMQIAWS 17>XP_005251567 Length = 147 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VAKQLAWS 8 +A Q+AWS Sbjct: 43 MAMQIAWS 50>XP_005250968 Length = 492 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AKQLAW 7 +KQLAW Sbjct: 437 SKQLAW 442>NP_085150 Length = 941 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 VAKQLAW 7 +AK+L+W Sbjct: 244 IAKKLSW 250>NP_001157968 Length = 1854 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VAKQLAW 7 V K+LAW Sbjct: 1001 VEKELAW 1007>NP_665879 Length = 349 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 AKQLAW 7 AKQL W Sbjct: 156 AKQLVW 161>XP_005247674 Length = 1089 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VAKQLAW 7 V K+LAW Sbjct: 236 VEKELAW 242>XP_006713762 Length = 1197 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VAKQLAW 7 V K+LAW Sbjct: 1045 VEKELAW 1051>XP_006713761 Length = 1554 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VAKQLAW 7 V K+LAW Sbjct: 701 VEKELAW 707>XP_006713760 Length = 1847 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VAKQLAW 7 V K+LAW Sbjct: 994 VEKELAW 1000>XP_006713759 Length = 1898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VAKQLAW 7 V K+LAW Sbjct: 1045 VEKELAW 1051>XP_006712953 Length = 1402 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 KQLAW 7 KQLAW Sbjct: 1365 KQLAW 1369>XP_006712952 Length = 1524 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 KQLAW 7 KQLAW Sbjct: 1365 KQLAW 1369>XP_006712951 Length = 2119 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 KQLAW 7 KQLAW Sbjct: 1365 KQLAW 1369>NP_057200 Length = 426 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 AKQLAW 7 AKQL W Sbjct: 156 AKQLVW 161>NP_000282 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 AKQLAWS 8 AKQ+ W+ Sbjct: 331 AKQIVWN 337>NP_001185574 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VAKQLAW 7 VAK+ AW Sbjct: 186 VAKKTAW 192>NP_001185573 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VAKQLAW 7 VAK+ AW Sbjct: 186 VAKKTAW 192>NP_477514 Length = 488 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VAKQLAW 7 VAK+ AW Sbjct: 361 VAKKTAW 367>NP_001003818 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VAKQLAW 7 VAK+ AW Sbjct: 389 VAKKTAW 395>NP_001027006 Length = 1149 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 KQLAWS 8 KQ+AW+ Sbjct: 1103 KQIAWN 1108Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.115 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 680,599 Number of extensions: 567 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |