Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_066124 20 299 XP_006717999 20 299 NP_000187 17 3301 NP_690848 17 3301 XP_006716576 17 3301 XP_005250867 17 3301 NP_001123308 17 4312 NP_001123306 17 4312 NP_001123312 17 4312 NP_001123307 17 4312 NP_001123316 17 4312 NP_001123304 17 4312 NP_001123305 17 4312 NP_001123309 17 4312 NP_001123299 17 4312 NP_001123313 17 4312 NP_000710 17 4312 NP_001123314 17 4312 NP_001123311 17 4312 NP_001123310 17 4312 NP_001123318 17 4312 NP_001123301 17 4312 NP_001123303 17 4312 NP_001123315 17 4312 NP_000060 17 4312 NP_001123302 17 4312 NP_001161095 17 4312 NP_955630 17 4312 NP_001161096 17 4312 NP_001161097 17 4312 NP_001243718 17 4312 NP_001243719 17 4312 NP_005174 17 4312 NP_001122312 17 4312 NP_055707 17 4312 NP_001273128 17 4312 NP_001122311 17 4312 NP_000711 17 4312 NP_001273123 17 4312 NP_001273118 17 4312 NP_001273117 17 4312 XP_006719080 17 4312 XP_006719079 17 4312 XP_006719078 17 4312 XP_005265505 17 4312 XP_006713388 17 4312 XP_005245535 17 4312 NP_057700 16 5631 NP_005036 16 5631 NP_774959 16 5631 NP_115904 16 5631 NP_689600 16 5631 XP_005247094 16 5631 XP_005246358 16 5631 NP_001099147 16 7355 NP_001087199 16 7355 NP_001239203 16 7355 NP_055947 15 9605 NP_055032 15 9605 NP_001017425 15 9605 NP_065757 15 9605 NP_001138917 15 9605 NP_001138916 15 9605 NP_001017424 15 9605 XP_005261074 15 9605 XP_006724099 15 9605 XP_006724098 15 9605 XP_005249731 15 9605 XP_005249730 15 9605 XP_005249729 15 9605 XP_005272028 15 9605 XP_005272027 15 9605 XP_005272026 15 9605 XP_005272025 15 9605 XP_005272024 15 9605 XP_006711370 15 9605 NP_001017372 15 9605 NP_054750 15 9605>NP_066124 Length = 1114 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AKLMDTFD 9 AKLMDTFD Sbjct: 1106 AKLMDTFD 1113>XP_006717999 Length = 1207 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AKLMDTFD 9 AKLMDTFD Sbjct: 1199 AKLMDTFD 1206>NP_000187 Length = 405 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VAKLMDTF 8 VA LMDTF Sbjct: 239 VALLMDTF 246>NP_690848 Length = 1626 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAKLMDTFD 9 VA L+DTF+ Sbjct: 61 VANLVDTFE 69>XP_006716576 Length = 1319 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAKLMDTFD 9 VA L+DTF+ Sbjct: 61 VANLVDTFE 69>XP_005250867 Length = 1606 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 VAKLMDTFD 9 VA L+DTF+ Sbjct: 61 VANLVDTFE 69>NP_001123308 Length = 2155 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1489 VAVIMDNFD 1497>NP_001123306 Length = 2157 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1472 VAVIMDNFD 1480>NP_001123312 Length = 2138 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1472 VAVIMDNFD 1480>NP_001123307 Length = 2157 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1472 VAVIMDNFD 1480>NP_001123316 Length = 2135 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1469 VAVIMDNFD 1477>NP_001123304 Length = 2158 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1492 VAVIMDNFD 1500>NP_001123305 Length = 2157 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1472 VAVIMDNFD 1480>NP_001123309 Length = 2146 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1461 VAVIMDNFD 1469>NP_001123299 Length = 2186 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1520 VAVIMDNFD 1528>NP_001123313 Length = 2138 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1472 VAVIMDNFD 1480>NP_000710 Length = 2138 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1472 VAVIMDNFD 1480>NP_001123314 Length = 2138 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1472 VAVIMDNFD 1480>NP_001123311 Length = 2144 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1459 VAVIMDNFD 1467>NP_001123310 Length = 2146 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1461 VAVIMDNFD 1469>NP_001123318 Length = 2127 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1461 VAVIMDNFD 1469>NP_001123301 Length = 2179 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1494 VAVIMDNFD 1502>NP_001123303 Length = 2166 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1500 VAVIMDNFD 1508>NP_001123315 Length = 2138 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1472 VAVIMDNFD 1480>NP_000060 Length = 1873 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1377 VAVIMDNFD 1385>NP_001123302 Length = 2173 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1472 VAVIMDNFD 1480>NP_001161095 Length = 2138 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1472 VAVIMDNFD 1480>NP_955630 Length = 2221 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1520 VAVIMDNFD 1528>NP_001161096 Length = 2173 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1472 VAVIMDNFD 1480>NP_001161097 Length = 2198 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1461 VAVIMDNFD 1469>NP_001243718 Length = 1966 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1426 VAVIMDNFD 1434>NP_001243719 Length = 1912 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1372 VAVIMDNFD 1380>NP_005174 Length = 1977 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1437 VAVIMDNFD 1445>NP_001122312 Length = 2161 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1460 VAVIMDNFD 1468>NP_055707 Length = 1271 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KLMDTFD 9 KLMD FD Sbjct: 262 KLMDRFD 268>NP_001273128 Length = 1271 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KLMDTFD 9 KLMD FD Sbjct: 262 KLMDRFD 268>NP_001122311 Length = 2137 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1445 VAVIMDNFD 1453>NP_000711 Length = 2181 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1480 VAVIMDNFD 1488>NP_001273123 Length = 1316 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KLMDTFD 9 KLMD FD Sbjct: 307 KLMDRFD 313>NP_001273118 Length = 1337 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KLMDTFD 9 KLMD FD Sbjct: 328 KLMDRFD 334>NP_001273117 Length = 1349 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KLMDTFD 9 KLMD FD Sbjct: 340 KLMDRFD 346>XP_006719080 Length = 2168 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1502 VAVIMDNFD 1510>XP_006719079 Length = 1459 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 774 VAVIMDNFD 782>XP_006719078 Length = 1905 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1220 VAVIMDNFD 1228>XP_005265505 Length = 2146 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1445 VAVIMDNFD 1453>XP_006713388 Length = 2194 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1493 VAVIMDNFD 1501>XP_005245535 Length = 1854 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VA +MD FD Sbjct: 1358 VAVIMDNFD 1366>NP_057700 Length = 588 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VAKLMDTF 8 VAK MD F Sbjct: 296 VAKFMDAF 303>NP_005036 Length = 3460 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AKLMDTFD 9 ++L+DTFD Sbjct: 3056 SQLVDTFD 3063Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LMDTFD 9 L+DTFD Sbjct: 1957 LLDTFD 1962>NP_774959 Length = 3458 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AKLMDTFD 9 ++L+DTFD Sbjct: 3056 SQLVDTFD 3063Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LMDTFD 9 L+DTFD Sbjct: 1957 LLDTFD 1962>NP_115904 Length = 212 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AKLMDTFD 9 A++MD FD Sbjct: 12 AEIMDAFD 19>NP_689600 Length = 426 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLMDTFD 9 K+MD FD Sbjct: 209 KMMDAFD 215>XP_005247094 Length = 212 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AKLMDTFD 9 A++MD FD Sbjct: 12 AEIMDAFD 19>XP_005246358 Length = 426 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLMDTFD 9 K+MD FD Sbjct: 209 KMMDAFD 215>NP_001099147 Length = 536 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VAKLMDTF 8 + KL+DTF Sbjct: 120 LGKLLDTF 127>NP_001087199 Length = 578 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 VAKLMDTFD 9 ++KLMD F+ Sbjct: 531 LSKLMDAFN 539>NP_001239203 Length = 693 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VAKLMDTF 8 + KL+DTF Sbjct: 321 LGKLLDTF 328>NP_055947 Length = 957 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VAKL DT + Sbjct: 465 VAKLADTLN 473>NP_055032 Length = 411 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VAKLMDTF 8 +AK+ DTF Sbjct: 189 IAKVEDTF 196>NP_001017425 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VAKLMDTF 8 +AK+ DTF Sbjct: 204 IAKVEDTF 211>NP_065757 Length = 1147 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLMDTFD 9 KL+D FD Sbjct: 260 KLLDRFD 266>NP_001138917 Length = 1125 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLMDTFD 9 KL+D FD Sbjct: 260 KLLDRFD 266>NP_001138916 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLMDTFD 9 KL+D FD Sbjct: 245 KLLDRFD 251>NP_001017424 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VAKLMDTF 8 +AK+ DTF Sbjct: 200 IAKVEDTF 207>XP_005261074 Length = 1088 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLMDTFD 9 KL+D FD Sbjct: 201 KLLDRFD 207>XP_006724099 Length = 1121 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLMDTFD 9 KL+D FD Sbjct: 260 KLLDRFD 266>XP_006724098 Length = 1143 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLMDTFD 9 KL+D FD Sbjct: 260 KLLDRFD 266>XP_005249731 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VAKL DT + Sbjct: 465 VAKLADTLN 473>XP_005249730 Length = 539 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VAKL DT + Sbjct: 465 VAKLADTLN 473>XP_005249729 Length = 968 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 VAKLMDTFD 9 VAKL DT + Sbjct: 465 VAKLADTLN 473>XP_005272028 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLMDTFD 9 KL+ TFD Sbjct: 388 KLLSTFD 394>XP_005272027 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLMDTFD 9 KL+ TFD Sbjct: 388 KLLSTFD 394>XP_005272026 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLMDTFD 9 KL+ TFD Sbjct: 388 KLLSTFD 394>XP_005272025 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLMDTFD 9 KL+ TFD Sbjct: 388 KLLSTFD 394>XP_005272024 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLMDTFD 9 KL+ TFD Sbjct: 388 KLLSTFD 394>XP_006711370 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VAKLMDTF 8 +AK+ DTF Sbjct: 204 IAKVEDTF 211>NP_001017372 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLMDTFD 9 KL+ TFD Sbjct: 388 KLLSTFD 394>NP_054750 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KLMDTFD 9 KL+ TFD Sbjct: 388 KLLSTFD 394Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.139 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 424,392 Number of extensions: 701 Number of successful extensions: 80 Number of sequences better than 10000.0: 78 Number of HSP's gapped: 80 Number of HSP's successfully gapped: 80 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |