Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001073887 16 5631 XP_006715335 16 5631 XP_005271148 16 5631 NP_004815 16 5631 NP_001268658 16 7355 NP_066566 16 7355 NP_004685 16 7355 NP_001167637 16 7355 XP_006722232 16 7355 XP_005257846 16 7355 NP_742057 15 9605 NP_079437 15 9605 NP_061897 15 9605 NP_001123363 15 9605 XP_006722175 15 9605 XP_006722174 15 9605 XP_006716681 15 9605 XP_006716499 15 9605 XP_005251241 15 9605 XP_005264436 15 9605 XP_006712098 15 9605 XP_006712097 15 9605 NP_001034201 15 9605>NP_001073887 Length = 979 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KTSPKA 9 KTSPKA Sbjct: 414 KTSPKA 419>XP_006715335 Length = 549 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KTSPKA 9 KTSPKA Sbjct: 98 KTSPKA 103>XP_005271148 Length = 979 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KTSPKA 9 KTSPKA Sbjct: 414 KTSPKA 419>NP_004815 Length = 544 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KTSPKA 9 KTSPKA Sbjct: 93 KTSPKA 98>NP_001268658 Length = 103 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IKTSPKA 9 +KT+PKA Sbjct: 12 LKTAPKA 18>NP_066566 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VAIKTSPK 8 VA+KTS K Sbjct: 9 VAVKTSAK 16>NP_004685 Length = 523 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VAIKTSPK 8 V +KTSP+ Sbjct: 268 VLVKTSPR 275>NP_001167637 Length = 523 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VAIKTSPK 8 V +KTSP+ Sbjct: 268 VLVKTSPR 275>XP_006722232 Length = 523 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VAIKTSPK 8 V +KTSP+ Sbjct: 268 VLVKTSPR 275>XP_005257846 Length = 523 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VAIKTSPK 8 V +KTSP+ Sbjct: 268 VLVKTSPR 275>NP_742057 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VAIKTSP 7 VA+KT P Sbjct: 7 VAVKTEP 13>NP_079437 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AIKTSPKA 9 A+KT P+A Sbjct: 287 ALKTEPQA 294>NP_061897 Length = 2071 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IKTSPKA 9 +KTSP+A Sbjct: 494 LKTSPEA 500>NP_001123363 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VAIKTSP 7 +AI+TSP Sbjct: 95 IAIQTSP 101>XP_006722175 Length = 730 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AIKTSPKA 9 A+KT P+A Sbjct: 136 ALKTEPQA 143>XP_006722174 Length = 743 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AIKTSPKA 9 A+KT P+A Sbjct: 287 ALKTEPQA 294>XP_006716681 Length = 1867 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IKTSPK 8 +KTSPK Sbjct: 223 LKTSPK 228>XP_006716499 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VAIKTSP 7 VA+KT P Sbjct: 7 VAVKTEP 13>XP_005251241 Length = 571 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 VAIKTSP 7 VA+KT P Sbjct: 19 VAVKTEP 25>XP_005264436 Length = 1881 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IKTSPKA 9 +KTSP+A Sbjct: 494 LKTSPEA 500>XP_006712098 Length = 2059 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IKTSPKA 9 +KTSP+A Sbjct: 482 LKTSPEA 488>XP_006712097 Length = 2070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IKTSPKA 9 +KTSP+A Sbjct: 494 LKTSPEA 500>NP_001034201 Length = 1857 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IKTSPK 8 +KTSPK Sbjct: 213 LKTSPK 218Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.304 0.114 0.285 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 712,282 Number of extensions: 963 Number of successful extensions: 23 Number of sequences better than 10000.0: 23 Number of HSP's gapped: 23 Number of HSP's successfully gapped: 23 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |