Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001013433 20 509 NP_060785 20 509 NP_361014 20 509 XP_006717797 18 1935 NP_056005 18 1935 NP_055954 17 2528 XP_006710543 17 2528 XP_006710542 17 2528 XP_006710541 17 2528 XP_005253164 17 3301 NP_036432 17 4312 NP_387449 17 4312 NP_387448 17 4312 NP_001243785 17 4312 NP_378663 17 4312 NP_003930 17 4312 NP_848549 17 4312 NP_060004 17 4312 NP_001093582 17 4312 NP_114124 17 4312 XP_005270321 17 4312 XP_006718117 17 4312 XP_005265916 17 4312 XP_005265915 17 4312 XP_005265914 17 4312 XP_005265913 17 4312 XP_005265912 17 4312 XP_005270526 17 4312 XP_005270527 17 4312 NP_073153 16 5631 XP_006726446 16 5631 XP_006712754 16 5631 XP_006712753 16 5631 XP_006712221 16 5631 NP_038347 16 7355 NP_001275762 16 7355 NP_036257 16 7355 NP_071415 16 7355 NP_000862 16 7355 NP_002680 16 7355 XP_006724993 16 7355 XP_006724460 16 7355 XP_005254198 16 7355 XP_005248624 16 7355 NP_038265 16 7355 NP_001096640 15 9605 NP_002461 15 9605 NP_054865 15 9605 NP_006775 15 9605 NP_005954 15 9605 NP_115852 15 9605 NP_115853 15 9605 NP_003793 15 9605 NP_060003 15 9605 XP_006722202 15 9605 XP_005257794 15 9605 XP_005256707 15 9605 XP_006721591 15 9605 XP_005250619 15 9605 XP_005263968 15 9605 XP_005263967 15 9605 XP_005263966 15 9605 NP_115752 15 9605>NP_001013433 Length = 589 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VAAVLCVQY 9 VAAV CVQY Sbjct: 383 VAAVRCVQY 391>NP_060785 Length = 627 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VAAVLCVQY 9 VAAV CVQY Sbjct: 421 VAAVRCVQY 429>NP_361014 Length = 707 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 VAAVLCVQY 9 VAAV CVQY Sbjct: 501 VAAVRCVQY 509>XP_006717797 Length = 238 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVLCVQY 9 +VLCVQY Sbjct: 147 SVLCVQY 153>NP_056005 Length = 260 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AVLCVQY 9 +VLCVQY Sbjct: 147 SVLCVQY 153>NP_055954 Length = 355 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AAVLCVQY 9 A VLC QY Sbjct: 272 ATVLCTQY 279>XP_006710543 Length = 256 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AAVLCVQY 9 A VLC QY Sbjct: 173 ATVLCTQY 180>XP_006710542 Length = 359 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AAVLCVQY 9 A VLC QY Sbjct: 276 ATVLCTQY 283>XP_006710541 Length = 382 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AAVLCVQY 9 A VLC QY Sbjct: 299 ATVLCTQY 306>XP_005253164 Length = 387 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 VAAVLCVQ 8 VAAVLC Q Sbjct: 376 VAAVLCPQ 383>NP_036432 Length = 542 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AVLCVQY 9 +VLC+QY Sbjct: 282 SVLCLQY 288>NP_387449 Length = 508 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AVLCVQY 9 +VLC+QY Sbjct: 248 SVLCLQY 254>NP_387448 Length = 529 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AVLCVQY 9 +VLC+QY Sbjct: 269 SVLCLQY 275>NP_001243785 Length = 579 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AVLCVQY 9 +VLC+QY Sbjct: 319 SVLCLQY 325>NP_378663 Length = 605 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AVLCVQY 9 +VLC+QY Sbjct: 345 SVLCLQY 351>NP_003930 Length = 569 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AVLCVQY 9 +VLC+QY Sbjct: 309 SVLCLQY 315>NP_848549 Length = 266 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VAAVLCV 7 +AAVLC+ Sbjct: 62 IAAVLCI 68>NP_060004 Length = 1941 Score = 16.5 bits (31), Expect = 4312 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 AVLCVQY 9 A+ C+QY Sbjct: 816 AIFCIQY 822>NP_001093582 Length = 1941 Score = 16.5 bits (31), Expect = 4312 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 AVLCVQY 9 A+ C+QY Sbjct: 816 AIFCIQY 822>NP_114124 Length = 252 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 AAVLCVQY 9 AAV CV Y Sbjct: 3 AAVACVDY 10>XP_005270321 Length = 326 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AVLCVQY 9 +VLC+QY Sbjct: 66 SVLCLQY 72>XP_006718117 Length = 732 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AVLCVQY 9 +VLC+QY Sbjct: 472 SVLCLQY 478>XP_005265916 Length = 494 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AVLCVQY 9 +VLC+QY Sbjct: 234 SVLCLQY 240>XP_005265915 Length = 510 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AVLCVQY 9 +VLC+QY Sbjct: 250 SVLCLQY 256>XP_005265914 Length = 515 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AVLCVQY 9 +VLC+QY Sbjct: 255 SVLCLQY 261>XP_005265913 Length = 531 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AVLCVQY 9 +VLC+QY Sbjct: 271 SVLCLQY 277>XP_005265912 Length = 563 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AVLCVQY 9 +VLC+QY Sbjct: 303 SVLCLQY 309>XP_005270526 Length = 266 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VAAVLCV 7 +AAVLC+ Sbjct: 62 IAAVLCI 68>XP_005270527 Length = 266 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VAAVLCV 7 +AAVLC+ Sbjct: 62 IAAVLCI 68>NP_073153 Length = 1944 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAAVLCVQY 9 +AA+LC Y Sbjct: 1581 IAALLCALY 1589>XP_006726446 Length = 449 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAAVLCVQY 9 +AA+LC Y Sbjct: 86 IAALLCALY 94>XP_006712754 Length = 1784 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAAVLCVQY 9 +AA+LC Y Sbjct: 1421 IAALLCALY 1429>XP_006712753 Length = 1846 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAAVLCVQY 9 +AA+LC Y Sbjct: 1483 IAALLCALY 1491>XP_006712221 Length = 449 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 VAAVLCVQY 9 +AA+LC Y Sbjct: 86 IAALLCALY 94>NP_038347 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VAAVLCV 7 +AA+LCV Sbjct: 69 IAALLCV 75>NP_001275762 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VAAVLCV 7 +AA+LCV Sbjct: 69 IAALLCV 75>NP_036257 Length = 532 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AVLCVQY 9 A+LC QY Sbjct: 165 AILCWQY 171>NP_071415 Length = 563 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VAAVLCVQ 8 VAAV C Q Sbjct: 426 VAAVACAQ 433>NP_000862 Length = 440 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 VAAVLCV 7 VAA LCV Sbjct: 29 VAAALCV 35>NP_002680 Length = 598 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 LCVQY 9 LCVQY Sbjct: 30 LCVQY 34>XP_006724993 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VAAVLCV 7 +AA+LCV Sbjct: 69 IAALLCV 75>XP_006724460 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VAAVLCV 7 +AA+LCV Sbjct: 69 IAALLCV 75>XP_005254198 Length = 532 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AVLCVQY 9 A+LC QY Sbjct: 165 AILCWQY 171>XP_005248624 Length = 525 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 VAAVLCVQ 8 VAAV C Q Sbjct: 388 VAAVACAQ 395>NP_038265 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 VAAVLCV 7 +AA+LCV Sbjct: 69 IAALLCV 75>NP_001096640 Length = 407 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 VAAVLCVQ 8 +AAV+C Q Sbjct: 198 IAAVVCQQ 205>NP_002461 Length = 1940 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 6/7 (85%) Query: 3 AVLCVQY 9 ++ C+QY Sbjct: 811 SIFCIQY 817>NP_054865 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VAAVLCVQ 8 VAA LCV+ Sbjct: 20 VAASLCVR 27>NP_006775 Length = 943 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 VLCVQY 9 VLCV Y Sbjct: 552 VLCVSY 557>NP_005954 Length = 1939 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 6/7 (85%) Query: 3 AVLCVQY 9 ++ C+QY Sbjct: 814 SIFCIQY 820>NP_115852 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VAAVLCVQ 8 VAA LCV+ Sbjct: 20 VAASLCVR 27>NP_115853 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VAAVLCVQ 8 VAA LCV+ Sbjct: 20 VAASLCVR 27>NP_003793 Length = 1938 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 6/7 (85%) Query: 3 AVLCVQY 9 ++ C+QY Sbjct: 814 SIFCIQY 820>NP_060003 Length = 1939 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 6/7 (85%) Query: 3 AVLCVQY 9 ++ C+QY Sbjct: 814 SIFCIQY 820>XP_006722202 Length = 199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AAVLCVQY 9 AAVLC + Sbjct: 3 AAVLCASF 10>XP_005257794 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AAVLCVQY 9 AAVLC + Sbjct: 61 AAVLCASF 68>XP_005256707 Length = 1940 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 6/7 (85%) Query: 3 AVLCVQY 9 ++ C+QY Sbjct: 815 SIFCIQY 821>XP_006721591 Length = 1940 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 6/7 (85%) Query: 3 AVLCVQY 9 ++ C+QY Sbjct: 811 SIFCIQY 817>XP_005250619 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 VAAVLCVQ 8 VAA LCV+ Sbjct: 20 VAASLCVR 27>XP_005263968 Length = 1861 Score = 15.4 bits (28), Expect = 9605 Identities = 3/6 (50%), Positives = 6/6 (100%) Query: 4 VLCVQY 9 +LC++Y Sbjct: 84 ILCIEY 89>XP_005263967 Length = 1899 Score = 15.4 bits (28), Expect = 9605 Identities = 3/6 (50%), Positives = 6/6 (100%) Query: 4 VLCVQY 9 +LC++Y Sbjct: 84 ILCIEY 89>XP_005263966 Length = 1900 Score = 15.4 bits (28), Expect = 9605 Identities = 3/6 (50%), Positives = 6/6 (100%) Query: 4 VLCVQY 9 +LC++Y Sbjct: 84 ILCIEY 89>NP_115752 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 AAVLCVQY 9 AAVLC + Sbjct: 61 AAVLCASF 68Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.340 0.138 0.435 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 587,980 Number of extensions: 817 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |