Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 21 229 NP_001035957 21 229 XP_006721990 21 229 XP_006721989 21 229 XP_005258041 21 229 XP_006721988 21 229 XP_006721987 21 229 XP_006721986 21 229 XP_005258040 21 229 XP_006721985 21 229 NP_078966 17 3301 XP_006723004 17 3301 NP_004144 17 4312 NP_001177748 17 4312 NP_001177747 17 4312 NP_001136245 16 5631 NP_001136239 16 5631 NP_001136236 16 5631 NP_001136238 16 5631 NP_001136240 16 5631 NP_001136235 16 5631 NP_001136237 16 5631 NP_149045 16 5631 NP_055073 16 5631 NP_031397 16 5631 XP_006723744 16 5631 XP_005260304 16 5631 XP_005272271 16 5631 XP_006717354 16 5631 NP_036336 16 5631 NP_064594 16 7355 NP_001092108 16 7355 NP_116267 16 7355 XP_006723512 16 7355 XP_005259417 16 7355 XP_005259416 16 7355 XP_005259415 16 7355 XP_005259414 16 7355 NP_001071161 15 9605 NP_001122391 15 9605 NP_002367 15 9605 NP_001122392 15 9605 NP_001122390 15 9605 NP_001122393 15 9605 NP_001269727 15 9605 NP_001269729 15 9605 NP_001135906 15 9605 NP_056222 15 9605 NP_056176 15 9605 NP_036347 15 9605 NP_002941 15 9605 NP_001161076 15 9605 NP_065116 15 9605 NP_775871 15 9605 XP_006720210 15 9605 XP_005267700 15 9605 XP_005267699 15 9605 XP_005267698 15 9605 XP_006720209 15 9605 XP_006718026 15 9605 XP_005270202 15 9605 XP_006718025 15 9605 XP_005270201 15 9605 XP_005263690 15 9605 XP_005263689 15 9605 XP_005263688 15 9605 XP_005263681 15 9605 XP_005263680 15 9605 XP_006712453 15 9605 XP_005263679 15 9605 XP_006712452 15 9605 NP_001139669 15 9605>NP_000258 Length = 2818 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TYPTVSQTS 9 TYPTV QTS Sbjct: 2486 TYPTVGQTS 2494>NP_001035957 Length = 2839 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TYPTVSQTS 9 TYPTV QTS Sbjct: 2507 TYPTVGQTS 2515>XP_006721990 Length = 2823 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TYPTVSQTS 9 TYPTV QTS Sbjct: 2517 TYPTVGQTS 2525>XP_006721989 Length = 2823 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TYPTVSQTS 9 TYPTV QTS Sbjct: 2517 TYPTVGQTS 2525>XP_005258041 Length = 2836 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TYPTVSQTS 9 TYPTV QTS Sbjct: 2486 TYPTVGQTS 2494>XP_006721988 Length = 2846 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TYPTVSQTS 9 TYPTV QTS Sbjct: 2496 TYPTVGQTS 2504>XP_006721987 Length = 2849 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TYPTVSQTS 9 TYPTV QTS Sbjct: 2517 TYPTVGQTS 2525>XP_006721986 Length = 2854 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TYPTVSQTS 9 TYPTV QTS Sbjct: 2504 TYPTVGQTS 2512>XP_005258040 Length = 2857 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TYPTVSQTS 9 TYPTV QTS Sbjct: 2507 TYPTVGQTS 2515>XP_006721985 Length = 2867 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TYPTVSQTS 9 TYPTV QTS Sbjct: 2517 TYPTVGQTS 2525>NP_078966 Length = 14507 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TYPTVSQT 8 T+PT+S+T Sbjct: 11560 TFPTLSET 11567Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TYPTVSQTS 9 T PTVS+T+ Sbjct: 10606 TIPTVSKTT 10614>XP_006723004 Length = 6443 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TYPTVSQT 8 T+PT+S+T Sbjct: 3474 TFPTLSET 3481Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TYPTVSQTS 9 T PTVS+T+ Sbjct: 2520 TIPTVSKTT 2528>NP_004144 Length = 861 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YPTVSQT 8 YPT+S+T Sbjct: 813 YPTMSET 819>NP_001177748 Length = 856 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YPTVSQT 8 YPT+S+T Sbjct: 808 YPTMSET 814>NP_001177747 Length = 861 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YPTVSQT 8 YPT+S+T Sbjct: 813 YPTMSET 819>NP_001136245 Length = 1932 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TYPTVSQT 8 T PTVS+T Sbjct: 1650 TLPTVSRT 1657>NP_001136239 Length = 1915 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TYPTVSQT 8 T PTVS+T Sbjct: 1633 TLPTVSRT 1640>NP_001136236 Length = 1957 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TYPTVSQT 8 T PTVS+T Sbjct: 1675 TLPTVSRT 1682>NP_001136238 Length = 1952 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TYPTVSQT 8 T PTVS+T Sbjct: 1670 TLPTVSRT 1677>NP_001136240 Length = 1935 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TYPTVSQT 8 T PTVS+T Sbjct: 1653 TLPTVSRT 1660>NP_001136235 Length = 1962 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TYPTVSQT 8 T PTVS+T Sbjct: 1680 TLPTVSRT 1687>NP_001136237 Length = 1886 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TYPTVSQT 8 T PTVS+T Sbjct: 1604 TLPTVSRT 1611>NP_149045 Length = 1955 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TYPTVSQT 8 T PTVS+T Sbjct: 1673 TLPTVSRT 1680>NP_055073 Length = 1530 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PTVSQTS 9 P+VSQTS Sbjct: 523 PSVSQTS 529>NP_031397 Length = 726 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 PTVSQT 8 PTVSQT Sbjct: 188 PTVSQT 193>XP_006723744 Length = 847 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PTVSQTS 9 P+VSQTS Sbjct: 523 PSVSQTS 529>XP_005260304 Length = 1530 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 PTVSQTS 9 P+VSQTS Sbjct: 523 PSVSQTS 529>XP_005272271 Length = 725 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 PTVSQT 8 PTVSQT Sbjct: 188 PTVSQT 193>XP_006717354 Length = 726 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 PTVSQT 8 PTVSQT Sbjct: 188 PTVSQT 193>NP_036336 Length = 822 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 PTVSQT 8 PTVSQT Sbjct: 139 PTVSQT 144>NP_064594 Length = 340 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 YPTVSQT 8 YP V+QT Sbjct: 333 YPVVTQT 339>NP_001092108 Length = 708 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YPTVSQT 8 +P+VSQT Sbjct: 504 FPSVSQT 510>NP_116267 Length = 266 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YPTVSQTS 9 YPTVS S Sbjct: 149 YPTVSTIS 156>XP_006723512 Length = 163 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YPTVSQTS 9 YPTVS S Sbjct: 46 YPTVSTIS 53>XP_005259417 Length = 163 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YPTVSQTS 9 YPTVS S Sbjct: 46 YPTVSTIS 53>XP_005259416 Length = 169 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YPTVSQTS 9 YPTVS S Sbjct: 52 YPTVSTIS 59>XP_005259415 Length = 238 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YPTVSQTS 9 YPTVS S Sbjct: 121 YPTVSTIS 128>XP_005259414 Length = 238 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YPTVSQTS 9 YPTVS S Sbjct: 121 YPTVSTIS 128>NP_001071161 Length = 205 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PTVSQTS 9 PT++QTS Sbjct: 26 PTMTQTS 32>NP_001122391 Length = 744 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YPTVSQTS 9 YP SQTS Sbjct: 432 YPKRSQTS 439>NP_002367 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YPTVSQTS 9 YP SQTS Sbjct: 432 YPKRSQTS 439>NP_001122392 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YPTVSQTS 9 YP SQTS Sbjct: 416 YPKRSQTS 423>NP_001122390 Length = 753 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YPTVSQTS 9 YP SQTS Sbjct: 432 YPKRSQTS 439>NP_001122393 Length = 659 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YPTVSQTS 9 YP SQTS Sbjct: 353 YPKRSQTS 360>NP_001269727 Length = 1100 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YPTVSQTS 9 YPTVS S Sbjct: 444 YPTVSTHS 451>NP_001269729 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YPTVSQTS 9 YPTVS S Sbjct: 388 YPTVSTHS 395>NP_001135906 Length = 863 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 YPTVSQT 8 YP VSQ+ Sbjct: 225 YPNVSQS 231>NP_056222 Length = 271 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 PTVSQTS 9 PTV QTS Sbjct: 23 PTVVQTS 29>NP_056176 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YPTVSQTS 9 YPTVS S Sbjct: 444 YPTVSTHS 451>NP_036347 Length = 916 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 YPTVSQT 8 YP VSQ+ Sbjct: 225 YPNVSQS 231>NP_002941 Length = 607 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 YPTVSQT 8 YPT +QT Sbjct: 166 YPTKTQT 172>NP_001161076 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TYPTVSQT 8 ++PT+S T Sbjct: 423 SFPTISST 430>NP_065116 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TYPTVSQT 8 ++PT+S T Sbjct: 423 SFPTISST 430>NP_775871 Length = 8384 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 PTVSQTS 9 PTV+QT+ Sbjct: 3171 PTVTQTT 3177>XP_006720210 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YPTVSQTS 9 YP SQTS Sbjct: 301 YPKRSQTS 308>XP_005267700 Length = 643 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YPTVSQTS 9 YP SQTS Sbjct: 432 YPKRSQTS 439>XP_005267699 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YPTVSQTS 9 YP SQTS Sbjct: 416 YPKRSQTS 423>XP_005267698 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YPTVSQTS 9 YP SQTS Sbjct: 432 YPKRSQTS 439>XP_006720209 Length = 739 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YPTVSQTS 9 YP SQTS Sbjct: 418 YPKRSQTS 425>XP_006718026 Length = 552 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TYPTVSQT 8 ++PT+S T Sbjct: 309 SFPTISST 316>XP_005270202 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TYPTVSQT 8 ++PT+S T Sbjct: 375 SFPTISST 382>XP_006718025 Length = 645 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TYPTVSQT 8 ++PT+S T Sbjct: 423 SFPTISST 430>XP_005270201 Length = 662 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TYPTVSQT 8 ++PT+S T Sbjct: 419 SFPTISST 426>XP_005263690 Length = 591 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YPTVSQTS 9 YPTVS S Sbjct: 444 YPTVSTHS 451>XP_005263689 Length = 887 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YPTVSQTS 9 YPTVS S Sbjct: 231 YPTVSTHS 238>XP_005263688 Length = 948 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YPTVSQTS 9 YPTVS S Sbjct: 444 YPTVSTHS 451>XP_005263681 Length = 1056 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YPTVSQTS 9 YPTVS S Sbjct: 400 YPTVSTHS 407>XP_005263680 Length = 1056 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YPTVSQTS 9 YPTVS S Sbjct: 400 YPTVSTHS 407>XP_006712453 Length = 1084 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YPTVSQTS 9 YPTVS S Sbjct: 428 YPTVSTHS 435>XP_005263679 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YPTVSQTS 9 YPTVS S Sbjct: 430 YPTVSTHS 437>XP_006712452 Length = 1100 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YPTVSQTS 9 YPTVS S Sbjct: 444 YPTVSTHS 451>NP_001139669 Length = 7081 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TYPTVSQ 7 TY T+SQ Sbjct: 845 TYTTISQ 851Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.295 0.104 0.276 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 526,865 Number of extensions: 929 Number of successful extensions: 74 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 74 Number of HSP's successfully gapped: 74 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |