Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001245200                                                           18    1935
NP_000240                                                              18    1935
XP_005265218                                                           18    1935
NP_001257293                                                           17    2528
NP_036322                                                              17    2528
NP_001257294                                                           17    2528
NP_001029345                                                           17    2528
XP_006713545                                                           17    2528
XP_006713544                                                           17    2528
NP_061159                                                              17    3301
NP_001004127                                                           17    3301
XP_006720683                                                           17    3301
XP_005254625                                                           17    3301
XP_005254624                                                           17    3301
NP_001006659                                                           17    4312
NP_001868                                                              17    4312
NP_005415                                                              17    4312
NP_001240286                                                           17    4312
XP_006710932                                                           17    4312
XP_005271221                                                           17    4312
XP_005271220                                                           17    4312
NP_742151                                                              16    5631
XP_005258822                                                           16    5631
NP_742150                                                              16    5631
NP_573400                                                              16    7355
NP_008981                                                              16    7355
NP_542381                                                              16    7355
NP_056125                                                              16    7355
NP_001135444                                                           16    7355
NP_996792                                                              16    7355
NP_001123999                                                           16    7355
NP_001124000                                                           16    7355
NP_001238900                                                           16    7355
NP_001098714                                                           16    7355
NP_003962                                                              16    7355
XP_006723752                                                           16    7355
XP_006723751                                                           16    7355
XP_006723750                                                           16    7355
XP_006723749                                                           16    7355
XP_006723748                                                           16    7355
XP_006722401                                                           16    7355
XP_006722400                                                           16    7355
XP_006722399                                                           16    7355
XP_006722398                                                           16    7355
XP_005257831                                                           16    7355
XP_006722226                                                           16    7355
XP_005257830                                                           16    7355
XP_005257829                                                           16    7355
XP_005257828                                                           16    7355
XP_005257827                                                           16    7355
XP_005257826                                                           16    7355
XP_005257825                                                           16    7355
XP_005257824                                                           16    7355
XP_005254809                                                           16    7355
XP_005254808                                                           16    7355
XP_006716385                                                           16    7355
XP_006716384                                                           16    7355
XP_006716383                                                           16    7355
XP_006716382                                                           16    7355
XP_006716381                                                           16    7355
NP_002836                                                              16    7355
NP_612395                                                              15    9605
NP_001122403                                                           15    9605
NP_058640                                                              15    9605
NP_000213                                                              15    9605
NP_001087241                                                           15    9605
NP_000450                                                              15    9605
NP_001277006                                                           15    9605
NP_001258463                                                           15    9605
NP_001380                                                              15    9605
NP_000290                                                              15    9605
NP_001005337                                                           15    9605
NP_056234                                                              15    9605
NP_113623                                                              15    9605
NP_573439                                                              15    9605
NP_573438                                                              15    9605
NP_001181930                                                           15    9605
NP_005695                                                              15    9605
XP_006725230                                                           15    9605
XP_005274542                                                           15    9605
XP_005256248                                                           15    9605
XP_006720283                                                           15    9605
XP_005251620                                                           15    9605
XP_005251618                                                           15    9605
XP_005263407                                                           15    9605
XP_005263406                                                           15    9605
XP_006714477                                                           15    9605
XP_006714476                                                           15    9605
XP_006714101                                                           15    9605
XP_005265799                                                           15    9605
XP_005265798                                                           15    9605
XP_005265797                                                           15    9605
XP_006710336                                                           15    9605
XP_006710335                                                           15    9605
XP_006710334                                                           15    9605
XP_006710333                                                           15    9605
XP_006710332                                                           15    9605
NP_060918                                                              15    9605
NP_065869                                                              15    9605
NP_113678                                                              15    9605
>NP_001245200
          Length = 687

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  TVVNCIAAG 9
          TVVN IAAG
Sbjct: 14 TVVNRIAAG 22
>NP_000240
          Length = 756

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  TVVNCIAAG 9
          TVVN IAAG
Sbjct: 14 TVVNRIAAG 22
>XP_005265218
          Length = 687

 Score = 17.7 bits (34), Expect =  1935
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  TVVNCIAAG 9
          TVVN IAAG
Sbjct: 14 TVVNRIAAG 22
>NP_001257293
          Length = 912

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   NCIAAG 9
           NCIAAG
Sbjct: 716 NCIAAG 721
>NP_036322
          Length = 902

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   NCIAAG 9
           NCIAAG
Sbjct: 706 NCIAAG 711
>NP_001257294
          Length = 801

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   NCIAAG 9
           NCIAAG
Sbjct: 605 NCIAAG 610
>NP_001029345
          Length = 923

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   NCIAAG 9
           NCIAAG
Sbjct: 727 NCIAAG 732
>XP_006713545
          Length = 900

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   NCIAAG 9
           NCIAAG
Sbjct: 704 NCIAAG 709
>XP_006713544
          Length = 902

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   NCIAAG 9
           NCIAAG
Sbjct: 706 NCIAAG 711
>NP_061159
          Length = 1361

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   VVNCIAAG 9
           ++NC AAG
Sbjct: 682 LINCAAAG 689
>NP_001004127
          Length = 492

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   VVNCIAAG 9
           VV C+AAG
Sbjct: 404 VVECMAAG 411
>XP_006720683
          Length = 804

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   VVNCIAAG 9
           ++NC AAG
Sbjct: 125 LINCAAAG 132
>XP_005254625
          Length = 1361

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   VVNCIAAG 9
           ++NC AAG
Sbjct: 682 LINCAAAG 689
>XP_005254624
          Length = 1361

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   VVNCIAAG 9
           ++NC AAG
Sbjct: 682 LINCAAAG 689
>NP_001006659
          Length = 1092

 Score = 16.5 bits (31), Expect =  4312
 Identities = 3/8 (37%), Positives = 8/8 (100%)

Query: 2   VVNCIAAG 9
           ++NC+++G
Sbjct: 194 IINCLSSG 201
>NP_001868
          Length = 1033

 Score = 16.5 bits (31), Expect =  4312
 Identities = 3/8 (37%), Positives = 8/8 (100%)

Query: 2   VVNCIAAG 9
           ++NC+++G
Sbjct: 194 IINCLSSG 201
>NP_005415
          Length = 1138

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   VNCIAAG 9
           +NC AAG
Sbjct: 370 INCAAAG 376
>NP_001240286
          Length = 1093

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   VNCIAAG 9
           +NC AAG
Sbjct: 325 INCAAAG 331
>XP_006710932
          Length = 783

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  VNCIAAG 9
          +NC AAG
Sbjct: 15 INCAAAG 21
>XP_005271221
          Length = 830

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   VNCIAAG 9
           +NC AAG
Sbjct: 370 INCAAAG 376
>XP_005271220
          Length = 1095

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   VNCIAAG 9
           +NC AAG
Sbjct: 327 INCAAAG 333
>NP_742151
          Length = 196

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 3   VNCIAAG 9
           +NC+A+G
Sbjct: 186 LNCVASG 192
>XP_005258822
          Length = 200

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 3   VNCIAAG 9
           +NC+A+G
Sbjct: 190 LNCVASG 196
>NP_742150
          Length = 200

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 3   VNCIAAG 9
           +NC+A+G
Sbjct: 190 LNCVASG 196
>NP_573400
          Length = 1460

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    TVVNCIAAG 9
            TVV+C+  G
Sbjct: 1393 TVVHCLNGG 1401
>NP_008981
          Length = 1441

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    TVVNCIAAG 9
            TVV+C+  G
Sbjct: 1374 TVVHCLNGG 1382
>NP_542381
          Length = 267

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  VVNCIAAG 9
          ++ CIAAG
Sbjct: 17 MMQCIAAG 24
>NP_056125
          Length = 1047

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   VNCIAA 8
           +NC+AA
Sbjct: 892 INCVAA 897
>NP_001135444
          Length = 165

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  VVNCIAAG 9
          ++ CIAAG
Sbjct: 17 MMQCIAAG 24
>NP_996792
          Length = 513

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   VNCIAA 8
           +NC+AA
Sbjct: 358 INCVAA 363
>NP_001123999
          Length = 1311

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   TVVNCIAAG 9
           TVV C A G
Sbjct: 833 TVVGCSAEG 841
>NP_001124000
          Length = 1321

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   TVVNCIAAG 9
           TVV C A G
Sbjct: 843 TVVGCSAEG 851
>NP_001238900
          Length = 1177

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   TVVNCIAAG 9
           TVV C A G
Sbjct: 686 TVVGCSAEG 694
>NP_001098714
          Length = 1465

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    TVVNCIAAG 9
            TVV+C+  G
Sbjct: 1398 TVVHCLNGG 1406
>NP_003962
          Length = 1307

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   TVVNCIAAG 9
           TVV C A G
Sbjct: 829 TVVGCSAEG 837
>XP_006723752
          Length = 1387

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    TVVNCIAAG 9
            TVV+C+  G
Sbjct: 1320 TVVHCLNGG 1328
>XP_006723751
          Length = 1427

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    TVVNCIAAG 9
            TVV+C+  G
Sbjct: 1360 TVVHCLNGG 1368
>XP_006723750
          Length = 1427

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    TVVNCIAAG 9
            TVV+C+  G
Sbjct: 1360 TVVHCLNGG 1368
>XP_006723749
          Length = 1428

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    TVVNCIAAG 9
            TVV+C+  G
Sbjct: 1361 TVVHCLNGG 1369
>XP_006723748
          Length = 1437

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    TVVNCIAAG 9
            TVV+C+  G
Sbjct: 1370 TVVHCLNGG 1378
>XP_006722401
          Length = 1432

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    TVVNCIAAG 9
            TVV+C+  G
Sbjct: 1365 TVVHCLNGG 1373
>XP_006722400
          Length = 1469

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    TVVNCIAAG 9
            TVV+C+  G
Sbjct: 1402 TVVHCLNGG 1410
>XP_006722399
          Length = 1477

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    TVVNCIAAG 9
            TVV+C+  G
Sbjct: 1410 TVVHCLNGG 1418
>XP_006722398
          Length = 1494

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    TVVNCIAAG 9
            TVV+C+  G
Sbjct: 1427 TVVHCLNGG 1435
>XP_005257831
          Length = 1164

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   TVVNCIAAG 9
           TVV C A G
Sbjct: 686 TVVGCSAEG 694
>XP_006722226
          Length = 1173

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   TVVNCIAAG 9
           TVV C A G
Sbjct: 682 TVVGCSAEG 690
>XP_005257830
          Length = 1181

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   TVVNCIAAG 9
           TVV C A G
Sbjct: 690 TVVGCSAEG 698
>XP_005257829
          Length = 1195

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   TVVNCIAAG 9
           TVV C A G
Sbjct: 704 TVVGCSAEG 712
>XP_005257828
          Length = 1320

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   TVVNCIAAG 9
           TVV C A G
Sbjct: 829 TVVGCSAEG 837
>XP_005257827
          Length = 1324

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   TVVNCIAAG 9
           TVV C A G
Sbjct: 833 TVVGCSAEG 841
>XP_005257826
          Length = 1325

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   TVVNCIAAG 9
           TVV C A G
Sbjct: 847 TVVGCSAEG 855
>XP_005257825
          Length = 1334

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   TVVNCIAAG 9
           TVV C A G
Sbjct: 843 TVVGCSAEG 851
>XP_005257824
          Length = 1338

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   TVVNCIAAG 9
           TVV C A G
Sbjct: 847 TVVGCSAEG 855
>XP_005254809
          Length = 175

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  VVNCIAAG 9
          ++ CIAAG
Sbjct: 86 MMQCIAAG 93
>XP_005254808
          Length = 365

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  VVNCIAAG 9
          ++ CIAAG
Sbjct: 86 MMQCIAAG 93
>XP_006716385
          Length = 488

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   VNCIAA 8
           +NC+AA
Sbjct: 333 INCVAA 338
>XP_006716384
          Length = 488

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   VNCIAA 8
           +NC+AA
Sbjct: 333 INCVAA 338
>XP_006716383
          Length = 511

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   VNCIAA 8
           +NC+AA
Sbjct: 356 INCVAA 361
>XP_006716382
          Length = 571

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   VNCIAA 8
           +NC+AA
Sbjct: 416 INCVAA 421
>XP_006716381
          Length = 1014

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   VNCIAA 8
           +NC+AA
Sbjct: 859 INCVAA 864
>NP_002836
          Length = 1452

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    TVVNCIAAG 9
            TVV+C+  G
Sbjct: 1385 TVVHCLNGG 1393
>NP_612395
          Length = 494

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  VVNCIAAG 9
          V+N +AAG
Sbjct: 70 VLNAVAAG 77
>NP_001122403
          Length = 389

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  VVNCIAAG 9
          V+N +AAG
Sbjct: 70 VLNAVAAG 77
>NP_058640
          Length = 299

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 1  TVVNC 5
          TVVNC
Sbjct: 28 TVVNC 32
>NP_000213
          Length = 976

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   VVNCIAAG 9
           ++ C+AAG
Sbjct: 425 MLQCVAAG 432
>NP_001087241
          Length = 972

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   VVNCIAAG 9
           ++ C+AAG
Sbjct: 425 MLQCVAAG 432
>NP_000450
          Length = 1124

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  TVVNCIAAG 9
          T + CIA+G
Sbjct: 40 TSLTCIASG 48
>NP_001277006
          Length = 1081

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  TVVNCIAAG 9
          T + CIA+G
Sbjct: 40 TSLTCIASG 48
>NP_001258463
          Length = 1994

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  TVVNCIAAG 9
          T+V C AAG
Sbjct: 42 TLVPCPAAG 50
>NP_001380
          Length = 2012

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  TVVNCIAAG 9
          T+V C AAG
Sbjct: 42 TLVPCPAAG 50
>NP_000290
          Length = 747

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   VVNCIAA 8
           V NC+AA
Sbjct: 458 VQNCVAA 464
>NP_001005337
          Length = 726

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   VVNCIAA 8
           V NC+AA
Sbjct: 437 VQNCVAA 443
>NP_056234
          Length = 2828

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    VNCIAAG 9
            +NC AAG
Sbjct: 2562 LNCSAAG 2568
>NP_113623
          Length = 228

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4 NCIAAG 9
         NC AAG
Sbjct: 4 NCAAAG 9
>NP_573439
          Length = 1436

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1    TVVNCIAAG 9
            T+V+C+  G
Sbjct: 1366 TIVHCLNGG 1374
>NP_573438
          Length = 1440

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1    TVVNCIAAG 9
            T+V+C+  G
Sbjct: 1370 TIVHCLNGG 1378
>NP_001181930
          Length = 1433

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1    TVVNCIAAG 9
            T+V+C+  G
Sbjct: 1363 TIVHCLNGG 1371
>NP_005695
          Length = 1446

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1    TVVNCIAAG 9
            T+V+C+  G
Sbjct: 1376 TIVHCLNGG 1384
>XP_006725230
          Length = 2636

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   VVNCIAAG 9
           VV C +AG
Sbjct: 385 VVTCFSAG 392
>XP_005274542
          Length = 2853

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    VNCIAAG 9
            +NC AAG
Sbjct: 2587 LNCSAAG 2593
>XP_005256248
          Length = 808

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1   TVVNCIAA 8
           T+V C+A+
Sbjct: 703 TIVTCLAS 710
>XP_006720283
          Length = 2636

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   VVNCIAAG 9
           VV C +AG
Sbjct: 385 VVTCFSAG 392
>XP_005251620
          Length = 1080

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  TVVNCIAAG 9
          T + CIA+G
Sbjct: 40 TSLTCIASG 48
>XP_005251618
          Length = 1123

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  TVVNCIAAG 9
          T + CIA+G
Sbjct: 40 TSLTCIASG 48
>XP_005263407
          Length = 244

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  VVNCIAAG 9
          V+N +AAG
Sbjct: 70 VLNAVAAG 77
>XP_005263406
          Length = 249

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  VVNCIAAG 9
          V+N +AAG
Sbjct: 70 VLNAVAAG 77
>XP_006714477
          Length = 364

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  VVNCIAAG 9
          V+N +AAG
Sbjct: 70 VLNAVAAG 77
>XP_006714476
          Length = 412

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  VVNCIAAG 9
          V+N +AAG
Sbjct: 70 VLNAVAAG 77
>XP_006714101
          Length = 526

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   VVNCIAAG 9
           ++ C+AAG
Sbjct: 426 MLQCVAAG 433
>XP_005265799
          Length = 973

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   VVNCIAAG 9
           ++ C+AAG
Sbjct: 426 MLQCVAAG 433
>XP_005265798
          Length = 976

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   VVNCIAAG 9
           ++ C+AAG
Sbjct: 426 MLQCVAAG 433
>XP_005265797
          Length = 977

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   VVNCIAAG 9
           ++ C+AAG
Sbjct: 426 MLQCVAAG 433
>XP_006710336
          Length = 1177

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1    TVVNCIAAG 9
            T+V+C+  G
Sbjct: 1107 TIVHCLNGG 1115
>XP_006710335
          Length = 1370

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1    TVVNCIAAG 9
            T+V+C+  G
Sbjct: 1300 TIVHCLNGG 1308
>XP_006710334
          Length = 1292

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1    TVVNCIAAG 9
            T+V+C+  G
Sbjct: 1222 TIVHCLNGG 1230
>XP_006710333
          Length = 1439

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1    TVVNCIAAG 9
            T+V+C+  G
Sbjct: 1369 TIVHCLNGG 1377
>XP_006710332
          Length = 1442

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1    TVVNCIAAG 9
            T+V+C+  G
Sbjct: 1372 TIVHCLNGG 1380
>NP_060918
          Length = 1230

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   TVVNCIAA 8
           T + CIAA
Sbjct: 233 TYIQCIAA 240
>NP_065869
          Length = 2458

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   VVNCIAAG 9
           VV C +AG
Sbjct: 207 VVTCFSAG 214
>NP_113678
          Length = 852

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1   TVVNCIAA 8
           T+V C+A+
Sbjct: 747 TIVTCLAS 754
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.326    0.133    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 556,997
Number of extensions: 869
Number of successful extensions: 100
Number of sequences better than 10000.0: 100
Number of HSP's gapped: 100
Number of HSP's successfully gapped: 100
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.1 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package