Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 18 1135 XP_005266703 18 1135 NP_075573 16 5631 NP_075571 16 5631 NP_001245258 16 5631 NP_001245260 16 5631 NP_079490 16 5631 NP_001137301 16 5631 NP_001879 16 5631 NP_001014444 16 5631 NP_996531 16 5631 NP_001245259 16 5631 NP_818932 16 5631 NP_036288 16 5631 XP_005260382 16 5631 XP_005260381 16 5631 XP_006723804 16 5631 XP_005260380 16 5631 XP_006723803 16 5631 XP_005260379 16 5631 XP_005260378 16 5631 XP_005260377 16 5631 XP_006723802 16 5631 XP_005260376 16 5631 XP_006723801 16 5631 XP_006723800 16 5631 XP_006723799 16 5631 XP_006723798 16 5631 XP_005266829 16 5631 XP_006722615 16 5631 XP_005254088 16 5631 XP_006719978 16 5631 XP_005254087 16 5631 NP_976221 16 7355 NP_005327 16 7355 NP_060362 16 7355 XP_005246736 16 7355 XP_005246735 16 7355 XP_005246734 16 7355 XP_005246733 16 7355 XP_006712539 16 7355 XP_005247059 16 7355 XP_005247058 16 7355 XP_006712538 16 7355 XP_005247060 16 7355 XP_005247057 16 7355 NP_060811 15 9605 NP_001265461 15 9605 XP_006725075 15 9605 XP_006725074 15 9605 XP_006725073 15 9605 XP_005267103 15 9605 XP_006715573 15 9605 XP_006715572 15 9605>NP_443179 Length = 2170 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TVTIATEV 8 TVTIATEV Sbjct: 1010 TVTIATEV 1017>XP_005266703 Length = 1501 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TVTIATEV 8 TVTIATEV Sbjct: 341 TVTIATEV 348>NP_075573 Length = 517 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVTIATEV 8 TVTIAT + Sbjct: 484 TVTIATRI 491>NP_075571 Length = 672 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TVTIATEV 8 TVTIAT + Sbjct: 639 TVTIATRI 646>NP_001245258 Length = 880 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIATEVR 9 T+ATE+R Sbjct: 774 TVATEIR 780>NP_001245260 Length = 779 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIATEVR 9 T+ATE+R Sbjct: 673 TVATEIR 679>NP_079490 Length = 335 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TVTIATEV 8 TVT+ TE+ Sbjct: 3 TVTVTTEI 10>NP_001137301 Length = 335 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TVTIATEV 8 TVT+ TE+ Sbjct: 3 TVTVTTEI 10>NP_001879 Length = 314 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TVTIATE 7 TVT+ATE Sbjct: 203 TVTLATE 209>NP_001014444 Length = 272 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TVTIATE 7 TVT+ATE Sbjct: 161 TVTLATE 167>NP_996531 Length = 340 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVTIATEVR 9 TVT+AT ++ Sbjct: 330 TVTLATSIK 338>NP_001245259 Length = 701 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIATEVR 9 T+ATE+R Sbjct: 595 TVATEIR 601>NP_818932 Length = 779 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIATEVR 9 T+ATE+R Sbjct: 673 TVATEIR 679>NP_036288 Length = 881 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIATEVR 9 T+ATE+R Sbjct: 775 TVATEIR 781>XP_005260382 Length = 732 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIATEVR 9 T+ATE+R Sbjct: 626 TVATEIR 632>XP_005260381 Length = 744 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIATEVR 9 T+ATE+R Sbjct: 638 TVATEIR 644>XP_006723804 Length = 819 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIATEVR 9 T+ATE+R Sbjct: 713 TVATEIR 719>XP_005260380 Length = 841 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIATEVR 9 T+ATE+R Sbjct: 735 TVATEIR 741>XP_006723803 Length = 853 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIATEVR 9 T+ATE+R Sbjct: 747 TVATEIR 753>XP_005260379 Length = 867 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIATEVR 9 T+ATE+R Sbjct: 761 TVATEIR 767>XP_005260378 Length = 868 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIATEVR 9 T+ATE+R Sbjct: 762 TVATEIR 768>XP_005260377 Length = 869 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIATEVR 9 T+ATE+R Sbjct: 763 TVATEIR 769>XP_006723802 Length = 880 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIATEVR 9 T+ATE+R Sbjct: 774 TVATEIR 780>XP_005260376 Length = 880 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIATEVR 9 T+ATE+R Sbjct: 774 TVATEIR 780>XP_006723801 Length = 881 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIATEVR 9 T+ATE+R Sbjct: 775 TVATEIR 781>XP_006723800 Length = 881 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIATEVR 9 T+ATE+R Sbjct: 775 TVATEIR 781>XP_006723799 Length = 881 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIATEVR 9 T+ATE+R Sbjct: 775 TVATEIR 781>XP_006723798 Length = 916 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TIATEVR 9 T+ATE+R Sbjct: 810 TVATEIR 816>XP_005266829 Length = 288 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TVTIATEV 8 TVT+ TE+ Sbjct: 3 TVTVTTEI 10>XP_006722615 Length = 335 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TVTIATEV 8 TVT+ TE+ Sbjct: 3 TVTVTTEI 10>XP_005254088 Length = 306 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVTIATEVR 9 TVT+AT ++ Sbjct: 296 TVTLATSIK 304>XP_006719978 Length = 340 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVTIATEVR 9 TVT+AT ++ Sbjct: 330 TVTLATSIK 338>XP_005254087 Length = 340 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVTIATEVR 9 TVT+AT ++ Sbjct: 330 TVTLATSIK 338>NP_976221 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVTIATEVR 9 T TIA EV+ Sbjct: 295 TTTIAVEVK 303>NP_005327 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVTIATEVR 9 T TIA EV+ Sbjct: 295 TTTIAVEVK 303>NP_060362 Length = 930 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TVTIATE 7 TVTI+TE Sbjct: 304 TVTISTE 310>XP_005246736 Length = 976 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TVTIATE 7 TVTI+TE Sbjct: 346 TVTISTE 352>XP_005246735 Length = 976 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TVTIATE 7 TVTI+TE Sbjct: 346 TVTISTE 352>XP_005246734 Length = 934 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TVTIATE 7 TVTI+TE Sbjct: 304 TVTISTE 310>XP_005246733 Length = 972 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TVTIATE 7 TVTI+TE Sbjct: 346 TVTISTE 352>XP_006712539 Length = 1250 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVTIATEVR 9 T TIA EV+ Sbjct: 295 TTTIAVEVK 303>XP_005247059 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVTIATEVR 9 T TIA EV+ Sbjct: 295 TTTIAVEVK 303>XP_005247058 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVTIATEVR 9 T TIA EV+ Sbjct: 295 TTTIAVEVK 303>XP_006712538 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVTIATEVR 9 T TIA EV+ Sbjct: 295 TTTIAVEVK 303>XP_005247060 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVTIATEVR 9 T TIA EV+ Sbjct: 295 TTTIAVEVK 303>XP_005247057 Length = 1268 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVTIATEVR 9 T TIA EV+ Sbjct: 295 TTTIAVEVK 303>NP_060811 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VTIATEVR 9 VT+A+E+R Sbjct: 550 VTVASELR 557>NP_001265461 Length = 552 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VTIATEVR 9 VT+A+E+R Sbjct: 424 VTVASELR 431>XP_006725075 Length = 552 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VTIATEVR 9 VT+A+E+R Sbjct: 424 VTVASELR 431>XP_006725074 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VTIATEVR 9 VT+A+E+R Sbjct: 550 VTVASELR 557>XP_006725073 Length = 688 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VTIATEVR 9 VT+A+E+R Sbjct: 560 VTVASELR 567>XP_005267103 Length = 552 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VTIATEVR 9 VT+A+E+R Sbjct: 424 VTVASELR 431>XP_006715573 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VTIATEVR 9 VT+A+E+R Sbjct: 550 VTVASELR 557>XP_006715572 Length = 688 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VTIATEVR 9 VT+A+E+R Sbjct: 560 VTVASELR 567Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.121 0.286 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 314,966 Number of extensions: 387 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |