Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 19 665 NP_001008895 17 3301 NP_001265442 17 3301 NP_001265443 17 3301 NP_003580 17 3301 XP_005263881 17 4312 NP_115685 17 4312 NP_065896 16 5631 NP_055077 16 5631 XP_006719582 16 5631 XP_005253643 16 5631 XP_005253642 16 5631 XP_006719581 16 5631 XP_006719580 16 5631 XP_005253640 16 5631 XP_006719579 16 5631 XP_005253639 16 5631 XP_006711533 16 5631 XP_005245422 16 5631 NP_065821 16 5631 NP_542168 16 7355 NP_001008275 16 7355 NP_597716 16 7355 NP_002825 16 7355 NP_001269779 16 7355 NP_065196 16 7355 NP_001116436 16 7355 NP_009146 16 7355 NP_054872 16 7355 XP_005276341 16 7355 XP_005266706 16 7355 XP_005266705 16 7355 XP_006722456 16 7355 XP_005255330 16 7355 XP_005255329 16 7355 XP_006720940 16 7355 XP_005255327 16 7355 XP_006719590 16 7355 XP_006719589 16 7355 XP_005249982 16 7355 XP_006712581 16 7355 XP_005246132 16 7355 XP_005264503 16 7355 XP_005264502 16 7355 XP_005264501 16 7355 XP_005264499 16 7355 XP_005276054 16 7355 NP_001073973 16 7355 NP_055919 15 9605 NP_006412 15 9605 NP_006411 15 9605 NP_821174 15 9605 NP_003120 15 9605 NP_060340 15 9605 XP_005260309 15 9605 XP_005273907 15 9605 XP_005273906 15 9605 XP_005251193 15 9605 XP_005251192 15 9605 XP_005251191 15 9605 XP_005245197 15 9605 XP_005245196 15 9605 NP_001186910 15 9605>NP_004295 Length = 1620 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TVLQLRQAC 9 TVLQL QAC Sbjct: 447 TVLQLGQAC 455>NP_001008895 Length = 759 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QLRQAC 9 QLRQAC Sbjct: 105 QLRQAC 110>NP_001265442 Length = 659 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QLRQAC 9 QLRQAC Sbjct: 5 QLRQAC 10>NP_001265443 Length = 667 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QLRQAC 9 QLRQAC Sbjct: 5 QLRQAC 10>NP_003580 Length = 659 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 QLRQAC 9 QLRQAC Sbjct: 5 QLRQAC 10>XP_005263881 Length = 158 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VLQLRQAC 9 + Q+RQAC Sbjct: 51 IRQIRQAC 58>NP_115685 Length = 110 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VLQLRQAC 9 + Q+RQAC Sbjct: 51 IRQIRQAC 58>NP_065896 Length = 1349 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VLQLRQAC 9 V QLR AC Sbjct: 745 VFQLRPAC 752>NP_055077 Length = 736 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VLQLRQAC 9 VLQ RQ C Sbjct: 290 VLQCRQRC 297>XP_006719582 Length = 1295 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VLQLRQAC 9 V QLR AC Sbjct: 745 VFQLRPAC 752>XP_005253643 Length = 1331 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VLQLRQAC 9 V QLR AC Sbjct: 679 VFQLRPAC 686>XP_005253642 Length = 1343 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VLQLRQAC 9 V QLR AC Sbjct: 745 VFQLRPAC 752>XP_006719581 Length = 1380 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VLQLRQAC 9 V QLR AC Sbjct: 728 VFQLRPAC 735>XP_006719580 Length = 1381 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VLQLRQAC 9 V QLR AC Sbjct: 729 VFQLRPAC 736>XP_005253640 Length = 1397 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VLQLRQAC 9 V QLR AC Sbjct: 745 VFQLRPAC 752>XP_006719579 Length = 1397 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VLQLRQAC 9 V QLR AC Sbjct: 745 VFQLRPAC 752>XP_005253639 Length = 1397 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VLQLRQAC 9 V QLR AC Sbjct: 745 VFQLRPAC 752>XP_006711533 Length = 747 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVLQLRQAC 9 T+ QLRQ C Sbjct: 689 TLQQLRQDC 697>XP_005245422 Length = 1203 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVLQLRQAC 9 T+ QLRQ C Sbjct: 689 TLQQLRQDC 697>NP_065821 Length = 1203 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVLQLRQAC 9 T+ QLRQ C Sbjct: 689 TLQQLRQDC 697>NP_542168 Length = 460 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TVLQLRQ 7 TVLQL+Q Sbjct: 208 TVLQLKQ 214>NP_001008275 Length = 477 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LQLRQAC 9 LQL++AC Sbjct: 138 LQLQEAC 144>NP_597716 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TVLQLRQ 7 TVLQL+Q Sbjct: 211 TVLQLKQ 217>NP_002825 Length = 593 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TVLQLRQ 7 TVLQL+Q Sbjct: 208 TVLQLKQ 214>NP_001269779 Length = 817 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLQLRQAC 9 +LQL QAC Sbjct: 175 LLQLFQAC 182>NP_065196 Length = 764 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLQLRQAC 9 +LQL QAC Sbjct: 175 LLQLFQAC 182>NP_001116436 Length = 849 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLQLRQAC 9 +LQL QAC Sbjct: 175 LLQLFQAC 182>NP_009146 Length = 485 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LQLRQAC 9 L+LRQ C Sbjct: 393 LELRQVC 399>NP_054872 Length = 971 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLRQAC 9 +LRQAC Sbjct: 441 ELRQAC 446>XP_005276341 Length = 254 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLRQAC 9 QLRQ+C Sbjct: 189 QLRQSC 194>XP_005266706 Length = 215 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TVLQLRQ 7 TVLQL+Q Sbjct: 20 TVLQLKQ 26>XP_005266705 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TVLQLRQ 7 TVLQL+Q Sbjct: 211 TVLQLKQ 217>XP_006722456 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TVLQLRQ 7 TVLQL+Q Sbjct: 211 TVLQLKQ 217>XP_005255330 Length = 580 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLRQAC 9 +LRQAC Sbjct: 50 ELRQAC 55>XP_005255329 Length = 958 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLRQAC 9 +LRQAC Sbjct: 428 ELRQAC 433>XP_006720940 Length = 971 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLRQAC 9 +LRQAC Sbjct: 441 ELRQAC 446>XP_005255327 Length = 971 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLRQAC 9 +LRQAC Sbjct: 441 ELRQAC 446>XP_006719590 Length = 559 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TVLQLRQ 7 TVLQL+Q Sbjct: 208 TVLQLKQ 214>XP_006719589 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TVLQLRQ 7 TVLQL+Q Sbjct: 208 TVLQLKQ 214>XP_005249982 Length = 254 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLRQAC 9 QLRQ+C Sbjct: 189 QLRQSC 194>XP_006712581 Length = 1047 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LQLRQAC 9 L+LR+AC Sbjct: 563 LELRKAC 569>XP_005246132 Length = 1047 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LQLRQAC 9 L+LR+AC Sbjct: 563 LELRKAC 569>XP_005264503 Length = 757 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLQLRQAC 9 +LQL QAC Sbjct: 175 LLQLFQAC 182>XP_005264502 Length = 789 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLQLRQAC 9 +LQL QAC Sbjct: 175 LLQLFQAC 182>XP_005264501 Length = 796 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLQLRQAC 9 +LQL QAC Sbjct: 175 LLQLFQAC 182>XP_005264499 Length = 842 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLQLRQAC 9 +LQL QAC Sbjct: 175 LLQLFQAC 182>XP_005276054 Length = 254 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLRQAC 9 QLRQ+C Sbjct: 189 QLRQSC 194>NP_001073973 Length = 1052 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LQLRQAC 9 L+LR+AC Sbjct: 563 LELRKAC 569>NP_055919 Length = 1938 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TVLQLRQAC 9 T LQL Q C Sbjct: 127 TSLQLAQEC 135>NP_006412 Length = 1849 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLRQAC 9 QLR+AC Sbjct: 32 QLRKAC 37>NP_006411 Length = 1785 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLRQAC 9 QLR+AC Sbjct: 31 QLRRAC 36>NP_821174 Length = 1023 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VLQLRQAC 9 VLQ+ +AC Sbjct: 450 VLQVSEAC 457>NP_003120 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLRQAC 9 QLR+AC Sbjct: 486 QLRKAC 491>NP_060340 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VLQLRQAC 9 VLQ+ +AC Sbjct: 451 VLQVSEAC 458>XP_005260309 Length = 1784 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLRQAC 9 QLR+AC Sbjct: 31 QLRRAC 36>XP_005273907 Length = 1930 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TVLQLRQAC 9 T LQL Q C Sbjct: 127 TSLQLAQEC 135>XP_005273906 Length = 1932 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TVLQLRQAC 9 T LQL Q C Sbjct: 127 TSLQLAQEC 135>XP_005251193 Length = 1800 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLRQAC 9 QLR+AC Sbjct: 32 QLRKAC 37>XP_005251192 Length = 1843 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLRQAC 9 QLR+AC Sbjct: 32 QLRKAC 37>XP_005251191 Length = 1849 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QLRQAC 9 QLR+AC Sbjct: 32 QLRKAC 37>XP_005245197 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VLQLRQA 8 +LQ+RQA Sbjct: 300 ILQMRQA 306>XP_005245196 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VLQLRQA 8 +LQ+RQA Sbjct: 300 ILQMRQA 306>NP_001186910 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVLQLRQAC 9 TVLQ+ AC Sbjct: 48 TVLQVVAAC 56Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.134 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 413,515 Number of extensions: 559 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |