Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245200 20 509 NP_000240 20 509 XP_005265218 20 509 NP_055590 18 1935 NP_001007468 18 1935 NP_001245256 18 1935 NP_001245255 18 1935 NP_001245254 18 1935 XP_006724453 18 1935 XP_005261930 18 1935 XP_006724452 18 1935 XP_005261929 18 1935 XP_005261928 18 1935 XP_005261927 18 1935 XP_006724451 18 1935 XP_005261926 18 1935 XP_005261925 18 1935 NP_612395 16 5631 NP_001122403 16 5631 XP_005263407 16 5631 XP_005263406 16 5631 XP_006714477 16 5631 XP_006714476 16 5631 NP_057238 16 7355 NP_004167 16 7355 NP_001005291 16 7355 NP_079215 16 7355 NP_003103 16 7355 XP_006721633 16 7355 XP_005256829 16 7355 XP_006721337 16 7355 XP_006721336 16 7355 XP_005256210 16 7355 XP_005249886 16 7355 XP_005249885 16 7355 NP_036379 15 9605 NP_001182531 15 9605 NP_036380 15 9605 NP_113662 15 9605 XP_006726481 15 9605 XP_005257220 15 9605 XP_005253855 15 9605 XP_005253854 15 9605 XP_005253853 15 9605 XP_006714573 15 9605 NP_031385 15 9605>NP_001245200 Length = 687 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TVLNRIAAG 9 TV+NRIAAG Sbjct: 14 TVVNRIAAG 22>NP_000240 Length = 756 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TVLNRIAAG 9 TV+NRIAAG Sbjct: 14 TVVNRIAAG 22>XP_005265218 Length = 687 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TVLNRIAAG 9 TV+NRIAAG Sbjct: 14 TVVNRIAAG 22>NP_055590 Length = 1211 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VLNRIAAG 9 +LNRIAAG Sbjct: 928 LLNRIAAG 935>NP_001007468 Length = 1242 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VLNRIAAG 9 +LNRIAAG Sbjct: 959 LLNRIAAG 966>NP_001245256 Length = 1148 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VLNRIAAG 9 +LNRIAAG Sbjct: 865 LLNRIAAG 872>NP_001245255 Length = 1160 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VLNRIAAG 9 +LNRIAAG Sbjct: 877 LLNRIAAG 884>NP_001245254 Length = 1187 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VLNRIAAG 9 +LNRIAAG Sbjct: 904 LLNRIAAG 911>XP_006724453 Length = 1160 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VLNRIAAG 9 +LNRIAAG Sbjct: 877 LLNRIAAG 884>XP_005261930 Length = 1189 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VLNRIAAG 9 +LNRIAAG Sbjct: 877 LLNRIAAG 884>XP_006724452 Length = 1189 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VLNRIAAG 9 +LNRIAAG Sbjct: 877 LLNRIAAG 884>XP_005261929 Length = 1240 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VLNRIAAG 9 +LNRIAAG Sbjct: 928 LLNRIAAG 935>XP_005261928 Length = 1247 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VLNRIAAG 9 +LNRIAAG Sbjct: 935 LLNRIAAG 942>XP_005261927 Length = 1247 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VLNRIAAG 9 +LNRIAAG Sbjct: 935 LLNRIAAG 942>XP_006724451 Length = 1271 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VLNRIAAG 9 +LNRIAAG Sbjct: 959 LLNRIAAG 966>XP_005261926 Length = 1271 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VLNRIAAG 9 +LNRIAAG Sbjct: 959 LLNRIAAG 966>XP_005261925 Length = 1271 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VLNRIAAG 9 +LNRIAAG Sbjct: 959 LLNRIAAG 966>NP_612395 Length = 494 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLNRIAAG 9 VLN +AAG Sbjct: 70 VLNAVAAG 77>NP_001122403 Length = 389 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLNRIAAG 9 VLN +AAG Sbjct: 70 VLNAVAAG 77>XP_005263407 Length = 244 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLNRIAAG 9 VLN +AAG Sbjct: 70 VLNAVAAG 77>XP_005263406 Length = 249 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLNRIAAG 9 VLN +AAG Sbjct: 70 VLNAVAAG 77>XP_006714477 Length = 364 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLNRIAAG 9 VLN +AAG Sbjct: 70 VLNAVAAG 77>XP_006714476 Length = 412 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLNRIAAG 9 VLN +AAG Sbjct: 70 VLNAVAAG 77>NP_057238 Length = 213 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TVLNRIAAG 9 T+LN+I +G Sbjct: 168 TILNKIDSG 176>NP_004167 Length = 1147 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LNRIAAG 9 +NR+AAG Sbjct: 305 INRLAAG 311>NP_001005291 Length = 1177 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LNRIAAG 9 +NR+AAG Sbjct: 335 INRLAAG 341>NP_079215 Length = 717 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLNRIAAG 9 VLNR A+G Sbjct: 434 VLNRYASG 441>NP_003103 Length = 784 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VLNRIAAG 9 V+N +AAG Sbjct: 270 VINNVAAG 277>XP_006721633 Length = 1123 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LNRIAAG 9 +NR+AAG Sbjct: 281 INRLAAG 287>XP_005256829 Length = 1145 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LNRIAAG 9 +NR+AAG Sbjct: 303 INRLAAG 309>XP_006721337 Length = 591 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLNRIAAG 9 VLNR A+G Sbjct: 308 VLNRYASG 315>XP_006721336 Length = 591 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLNRIAAG 9 VLNR A+G Sbjct: 308 VLNRYASG 315>XP_005256210 Length = 716 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLNRIAAG 9 VLNR A+G Sbjct: 433 VLNRYASG 440>XP_005249886 Length = 706 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VLNRIAAG 9 V+N +AAG Sbjct: 270 VINNVAAG 277>XP_005249885 Length = 767 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VLNRIAAG 9 V+N +AAG Sbjct: 253 VINNVAAG 260>NP_036379 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LNRIAAG 9 LNR AAG Sbjct: 247 LNRTAAG 253>NP_001182531 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LNRIAAG 9 LNR AAG Sbjct: 180 LNRTAAG 186>NP_036380 Length = 448 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LNRIAAG 9 LNR AAG Sbjct: 298 LNRTAAG 304>NP_113662 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVLNRIAAG 9 T NRI+AG Sbjct: 179 TQYNRISAG 187>XP_006726481 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NRIAAG 9 NR+AAG Sbjct: 25 NRVAAG 30>XP_005257220 Length = 703 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVLNRIAAG 9 T +NR AAG Sbjct: 295 TFINRNAAG 303>XP_005253855 Length = 279 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVLNRIAAG 9 T NRI+AG Sbjct: 179 TQYNRISAG 187>XP_005253854 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVLNRIAAG 9 T NRI+AG Sbjct: 179 TQYNRISAG 187>XP_005253853 Length = 294 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVLNRIAAG 9 T NRI+AG Sbjct: 179 TQYNRISAG 187>XP_006714573 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NRIAAG 9 NR+AAG Sbjct: 25 NRVAAG 30>NP_031385 Length = 703 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TVLNRIAAG 9 T +NR AAG Sbjct: 295 TFINRNAAG 303Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.134 0.353 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 297,338 Number of extensions: 337 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |