Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 18 1135 NP_671714 18 1135 XP_006715890 18 1135 XP_005250160 18 1135 XP_005250159 18 1135 NP_001191439 17 2528 NP_055733 17 3301 NP_055426 16 5631 XP_005248757 16 5631 XP_006715468 16 5631 XP_005248756 16 5631 XP_006715467 16 5631 NP_612440 16 5631 NP_055270 16 7355 NP_113584 16 7355 NP_085143 16 7355 NP_001258635 16 7355 NP_060016 16 7355 NP_005014 16 7355 XP_005262029 16 7355 XP_005262028 16 7355 XP_005262026 16 7355 XP_006724637 16 7355 XP_005262025 16 7355 XP_005262024 16 7355 XP_005262023 16 7355 XP_005262022 16 7355 XP_006719218 16 7355 XP_005251390 16 7355 XP_005251389 16 7355 XP_005272080 16 7355 XP_005272077 16 7355 XP_005273009 16 7355 NP_001240775 15 9605 NP_001491 15 9605 XP_006715129 15 9605>NP_005742 Length = 3907 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TTELMGKLE 9 TTELM KLE Sbjct: 938 TTELMEKLE 946>NP_671714 Length = 3899 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TTELMGKLE 9 TTELM KLE Sbjct: 938 TTELMEKLE 946>XP_006715890 Length = 3860 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TTELMGKLE 9 TTELM KLE Sbjct: 938 TTELMEKLE 946>XP_005250160 Length = 3939 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TTELMGKLE 9 TTELM KLE Sbjct: 938 TTELMEKLE 946>XP_005250159 Length = 3952 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TTELMGKLE 9 TTELM KLE Sbjct: 938 TTELMEKLE 946>NP_001191439 Length = 347 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TTELMGKL 8 TT+L+GKL Sbjct: 328 TTDLLGKL 335>NP_055733 Length = 802 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TTELMGKL 8 TTE MGKL Sbjct: 203 TTEEMGKL 210>NP_055426 Length = 5596 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTELMGKLE 9 TTEL+G E Sbjct: 2098 TTELLGGFE 2106>XP_005248757 Length = 3591 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTELMGKLE 9 TTEL+G E Sbjct: 93 TTELLGGFE 101>XP_006715468 Length = 3744 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTELMGKLE 9 TTEL+G E Sbjct: 246 TTELLGGFE 254>XP_005248756 Length = 3905 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTELMGKLE 9 TTEL+G E Sbjct: 407 TTELLGGFE 415>XP_006715467 Length = 5550 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TTELMGKLE 9 TTEL+G E Sbjct: 2098 TTELLGGFE 2106>NP_612440 Length = 412 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TTELMGKL 8 T EL+GKL Sbjct: 364 TLELLGKL 371>NP_055270 Length = 304 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TELMGKLE 9 T+L+G+LE Sbjct: 190 TQLLGQLE 197>NP_113584 Length = 4374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTELMGKLE 9 TT+L GK++ Sbjct: 3673 TTKLKGKMQ 3681>NP_085143 Length = 665 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TELMGKLE 9 T L+GKLE Sbjct: 105 TVLLGKLE 112>NP_001258635 Length = 233 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ELMGKLE 9 ELMGK++ Sbjct: 216 ELMGKID 222>NP_060016 Length = 510 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TELMGKLE 9 T+L+G+LE Sbjct: 344 TQLLGELE 351>NP_005014 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LMGKLE 9 LMGKLE Sbjct: 232 LMGKLE 237>XP_005262029 Length = 4240 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTELMGKLE 9 TT+L GK++ Sbjct: 3539 TTKLKGKMQ 3547>XP_005262028 Length = 4341 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTELMGKLE 9 TT+L GK++ Sbjct: 3640 TTKLKGKMQ 3648>XP_005262026 Length = 4359 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTELMGKLE 9 TT+L GK++ Sbjct: 3673 TTKLKGKMQ 3681>XP_006724637 Length = 4365 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTELMGKLE 9 TT+L GK++ Sbjct: 3664 TTKLKGKMQ 3672>XP_005262025 Length = 4373 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTELMGKLE 9 TT+L GK++ Sbjct: 3672 TTKLKGKMQ 3680>XP_005262024 Length = 4374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTELMGKLE 9 TT+L GK++ Sbjct: 3673 TTKLKGKMQ 3681>XP_005262023 Length = 4374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTELMGKLE 9 TT+L GK++ Sbjct: 3673 TTKLKGKMQ 3681>XP_005262022 Length = 4374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTELMGKLE 9 TT+L GK++ Sbjct: 3673 TTKLKGKMQ 3681>XP_006719218 Length = 665 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TELMGKLE 9 T L+GKLE Sbjct: 105 TVLLGKLE 112>XP_005251390 Length = 168 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ELMGKLE 9 ELMGK++ Sbjct: 151 ELMGKID 157>XP_005251389 Length = 239 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ELMGKLE 9 ELMGK++ Sbjct: 222 ELMGKID 228>XP_005272080 Length = 258 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LMGKLE 9 LMGKLE Sbjct: 109 LMGKLE 114>XP_005272077 Length = 428 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LMGKLE 9 LMGKLE Sbjct: 279 LMGKLE 284>XP_005273009 Length = 271 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TELMGKLE 9 T+L+G+LE Sbjct: 157 TQLLGQLE 164>NP_001240775 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTELMGKLE 9 T+EL GK++ Sbjct: 125 TSELYGKVQ 133>NP_001491 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTELMGKLE 9 T+EL GK++ Sbjct: 155 TSELYGKVQ 163>XP_006715129 Length = 290 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TTELMGKLE 9 T+EL GK++ Sbjct: 155 TSELYGKVQ 163Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.304 0.125 0.309 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 471,623 Number of extensions: 1031 Number of successful extensions: 36 Number of sequences better than 10000.0: 36 Number of HSP's gapped: 36 Number of HSP's successfully gapped: 36 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |