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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_000537                                                              19     665
NP_001263689                                                           19     665
NP_001119584                                                           19     665
NP_001119586                                                           19     665
NP_001263625                                                           19     665
NP_001119590                                                           19     665
NP_001263690                                                           19     665
NP_001119585                                                           19     665
NP_001263624                                                           19     665
NP_001119588                                                           19     665
NP_001119587                                                           19     665
NP_001119589                                                           19     665
NP_060497                                                              15    9605
NP_001230097                                                           15    9605
NP_001230098                                                           15    9605
NP_001230099                                                           15    9605
XP_005252552                                                           15    9605
XP_006717527                                                           15    9605
XP_006717526                                                           15    9605
XP_005252551                                                           15    9605
XP_006717525                                                           15    9605
XP_006717524                                                           15    9605
XP_005252547                                                           15    9605
XP_005252546                                                           15    9605
XP_006717523                                                           15    9605
XP_006717522                                                           15    9605
XP_006717521                                                           15    9605
XP_006717520                                                           15    9605
NP_612153                                                              15    9605

>NP_000537
          Length = 393

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   TRVRAMAIH 9
           TRVRAMAI+
Sbjct: 155 TRVRAMAIY 163



>NP_001263689
          Length = 354

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   TRVRAMAIH 9
           TRVRAMAI+
Sbjct: 116 TRVRAMAIY 124



>NP_001119584
          Length = 393

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   TRVRAMAIH 9
           TRVRAMAI+
Sbjct: 155 TRVRAMAIY 163



>NP_001119586
          Length = 341

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   TRVRAMAIH 9
           TRVRAMAI+
Sbjct: 155 TRVRAMAIY 163



>NP_001263625
          Length = 302

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   TRVRAMAIH 9
           TRVRAMAI+
Sbjct: 116 TRVRAMAIY 124



>NP_001119590
          Length = 354

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   TRVRAMAIH 9
           TRVRAMAI+
Sbjct: 116 TRVRAMAIY 124



>NP_001263690
          Length = 354

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   TRVRAMAIH 9
           TRVRAMAI+
Sbjct: 116 TRVRAMAIY 124



>NP_001119585
          Length = 346

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   TRVRAMAIH 9
           TRVRAMAI+
Sbjct: 155 TRVRAMAIY 163



>NP_001263624
          Length = 307

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   TRVRAMAIH 9
           TRVRAMAI+
Sbjct: 116 TRVRAMAIY 124



>NP_001119588
          Length = 209

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  TRVRAMAIH 9
          TRVRAMAI+
Sbjct: 23 TRVRAMAIY 31



>NP_001119587
          Length = 261

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  TRVRAMAIH 9
          TRVRAMAI+
Sbjct: 23 TRVRAMAIY 31



>NP_001119589
          Length = 214

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  TRVRAMAIH 9
          TRVRAMAI+
Sbjct: 23 TRVRAMAIY 31



>NP_060497
          Length = 1039

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   TRVRAMAIH 9
           TR+ ++A+H
Sbjct: 696 TRLHSLALH 704



>NP_001230097
          Length = 296

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   TRVRAMAIH 9
           TR+RA+  H
Sbjct: 201 TRLRALGSH 209



>NP_001230098
          Length = 256

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   TRVRAMAIH 9
           TR+RA+  H
Sbjct: 161 TRLRALGSH 169



>NP_001230099
          Length = 174

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  TRVRAMAIH 9
          TR+RA+  H
Sbjct: 79 TRLRALGSH 87



>XP_005252552
          Length = 701

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   TRVRAMAIH 9
           TR+ ++A+H
Sbjct: 347 TRLHSLALH 355



>XP_006717527
          Length = 721

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   TRVRAMAIH 9
           TR+ ++A+H
Sbjct: 367 TRLHSLALH 375



>XP_006717526
          Length = 753

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   TRVRAMAIH 9
           TR+ ++A+H
Sbjct: 399 TRLHSLALH 407



>XP_005252551
          Length = 902

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   TRVRAMAIH 9
           TR+ ++A+H
Sbjct: 548 TRLHSLALH 556



>XP_006717525
          Length = 1062

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   TRVRAMAIH 9
           TR+ ++A+H
Sbjct: 708 TRLHSLALH 716



>XP_006717524
          Length = 1072

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   TRVRAMAIH 9
           TR+ ++A+H
Sbjct: 729 TRLHSLALH 737



>XP_005252547
          Length = 1078

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   TRVRAMAIH 9
           TR+ ++A+H
Sbjct: 724 TRLHSLALH 732



>XP_005252546
          Length = 1083

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   TRVRAMAIH 9
           TR+ ++A+H
Sbjct: 729 TRLHSLALH 737



>XP_006717523
          Length = 1095

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   TRVRAMAIH 9
           TR+ ++A+H
Sbjct: 741 TRLHSLALH 749



>XP_006717522
          Length = 1098

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   TRVRAMAIH 9
           TR+ ++A+H
Sbjct: 744 TRLHSLALH 752



>XP_006717521
          Length = 1099

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   TRVRAMAIH 9
           TR+ ++A+H
Sbjct: 756 TRLHSLALH 764



>XP_006717520
          Length = 1110

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   TRVRAMAIH 9
           TR+ ++A+H
Sbjct: 756 TRLHSLALH 764



>NP_612153
          Length = 281

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   TRVRAMAIH 9
           TR+RA+  H
Sbjct: 186 TRLRALGSH 194



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.344    0.132    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 276,408
Number of extensions: 474
Number of successful extensions: 29
Number of sequences better than 10000.0: 29
Number of HSP's gapped: 29
Number of HSP's successfully gapped: 29
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.8 bits)
S2: 28 (15.4 bits)