Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_055621 17 2528 NP_001129471 17 2528 NP_001161076 17 3301 NP_065116 17 3301 XP_005270202 17 3301 XP_006718025 17 3301 XP_005270201 17 3301 NP_001035706 17 4312 NP_689732 17 4312 NP_006332 17 4312 XP_005255000 17 4312 XP_005254998 17 4312 XP_006717159 17 4312 XP_005246390 17 4312 XP_005246389 17 4312 XP_006712382 17 4312 XP_005246387 17 4312 XP_005246386 17 4312 XP_005246385 17 4312 XP_005263480 17 4312 NP_001120797 17 4312 NP_075267 16 5631 NP_068802 16 5631 NP_001017969 16 7355 NP_612369 16 7355 XP_006716793 16 7355 XP_005251442 16 7355 NP_002363 15 9605 NP_001004723 15 9605 NP_666499 15 9605 NP_055437 15 9605 NP_277053 15 9605 NP_938057 15 9605 NP_006832 15 9605 XP_006724633 15 9605 XP_005272755 15 9605 XP_006724632 15 9605 XP_005272754 15 9605 XP_005272753 15 9605 XP_005272752 15 9605 XP_005272751 15 9605 XP_006714679 15 9605 XP_006713017 15 9605 NP_001123614 15 9605 NP_666500 15 9605 NP_057040 15 9605>NP_055621 Length = 1516 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRPIQAFIF 9 T PIQ F+F Sbjct: 691 TLPIQPFVF 699>NP_001129471 Length = 1516 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRPIQAFIF 9 T PIQ F+F Sbjct: 691 TLPIQPFVF 699>NP_001161076 Length = 642 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRPIQAFI 8 T PIQA+I Sbjct: 67 TEPIQAYI 74>NP_065116 Length = 666 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRPIQAFI 8 T PIQA+I Sbjct: 67 TEPIQAYI 74>XP_005270202 Length = 618 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRPIQAFI 8 T PIQA+I Sbjct: 67 TEPIQAYI 74>XP_006718025 Length = 645 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRPIQAFI 8 T PIQA+I Sbjct: 67 TEPIQAYI 74>XP_005270201 Length = 662 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRPIQAFI 8 T PIQA+I Sbjct: 63 TEPIQAYI 70>NP_001035706 Length = 757 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRPIQAFI 8 T PIQAF+ Sbjct: 288 TWPIQAFV 295>NP_689732 Length = 987 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRPIQAF 7 TRP+Q+F Sbjct: 562 TRPLQSF 568>NP_006332 Length = 211 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RPIQAFIF 9 RP++ F+F Sbjct: 93 RPVEKFVF 100>XP_005255000 Length = 721 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRPIQAFI 8 T PIQAF+ Sbjct: 288 TWPIQAFV 295>XP_005254998 Length = 757 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRPIQAFI 8 T PIQAF+ Sbjct: 288 TWPIQAFV 295>XP_006717159 Length = 2293 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRPIQAFI 8 TRP+ AF+ Sbjct: 1609 TRPLTAFV 1616>XP_005246390 Length = 945 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRPIQAF 7 TRP+Q+F Sbjct: 562 TRPLQSF 568>XP_005246389 Length = 978 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRPIQAF 7 TRP+Q+F Sbjct: 595 TRPLQSF 601>XP_006712382 Length = 987 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRPIQAF 7 TRP+Q+F Sbjct: 562 TRPLQSF 568>XP_005246387 Length = 987 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRPIQAF 7 TRP+Q+F Sbjct: 562 TRPLQSF 568>XP_005246386 Length = 987 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRPIQAF 7 TRP+Q+F Sbjct: 562 TRPLQSF 568>XP_005246385 Length = 1020 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRPIQAF 7 TRP+Q+F Sbjct: 595 TRPLQSF 601>XP_005263480 Length = 276 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RPIQAFIF 9 RP++ F+F Sbjct: 158 RPVEKFVF 165>NP_001120797 Length = 211 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RPIQAFIF 9 RP++ F+F Sbjct: 93 RPVEKFVF 100>NP_075267 Length = 110 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 PIQAFIF 9 PI AF+F Sbjct: 85 PISAFVF 91>NP_068802 Length = 110 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 PIQAFIF 9 PI AF+F Sbjct: 85 PISAFVF 91>NP_001017969 Length = 2103 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRPIQAFI 8 T+PIQA + Sbjct: 1003 TKPIQALL 1010>NP_612369 Length = 1372 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RPIQAFI 8 RP+ AFI Sbjct: 917 RPVSAFI 923>XP_006716793 Length = 1317 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRPIQAFI 8 T+PIQA + Sbjct: 217 TKPIQALL 224>XP_005251442 Length = 2073 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRPIQAFI 8 T+PIQA + Sbjct: 973 TKPIQALL 980>NP_002363 Length = 1144 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 TRPIQAFI 8 T P+Q F+ Sbjct: 163 TEPLQVFV 170>NP_001004723 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TRPIQAF 7 TRP +AF Sbjct: 259 TRPFRAF 265>NP_666499 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 RPIQAFI 8 RP+QA++ Sbjct: 60 RPVQAWV 66>NP_055437 Length = 786 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 PIQAFIF 9 P+Q F+F Sbjct: 386 PLQLFVF 392>NP_277053 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TRPIQAFIF 9 T PI AF F Sbjct: 261 TVPIMAFAF 269>NP_938057 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 PIQAFIF 9 P+Q F+F Sbjct: 386 PLQLFVF 392>NP_006832 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TRPIQAFIF 9 T PI AF F Sbjct: 289 TIPIMAFAF 297>XP_006724633 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TRPIQAFIF 9 T PI AF F Sbjct: 210 TVPIMAFAF 218>XP_005272755 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TRPIQAFIF 9 T PI AF F Sbjct: 261 TVPIMAFAF 269>XP_006724632 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TRPIQAFIF 9 T PI AF F Sbjct: 261 TVPIMAFAF 269>XP_005272754 Length = 498 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TRPIQAFIF 9 T PI AF F Sbjct: 267 TVPIMAFAF 275>XP_005272753 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TRPIQAFIF 9 T PI AF F Sbjct: 308 TVPIMAFAF 316>XP_005272752 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TRPIQAFIF 9 T PI AF F Sbjct: 308 TVPIMAFAF 316>XP_005272751 Length = 539 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TRPIQAFIF 9 T PI AF F Sbjct: 308 TVPIMAFAF 316>XP_006714679 Length = 662 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 TRPIQAFI 8 T P+Q F+ Sbjct: 163 TEPLQVFV 170>XP_006713017 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TRPIQAFIF 9 T PI AF F Sbjct: 289 TIPIMAFAF 297>NP_001123614 Length = 786 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 PIQAFIF 9 P+Q F+F Sbjct: 386 PLQLFVF 392>NP_666500 Length = 263 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 RPIQAFI 8 RP+QA++ Sbjct: 60 RPVQAWV 66>NP_057040 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 RPIQAFI 8 RP+QA++ Sbjct: 60 RPVQAWV 66Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.348 0.155 0.488 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 623,534 Number of extensions: 939 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |