Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 20 509 NP_000170 20 509 NP_001268422 20 509 NP_001268423 20 509 XP_005264328 20 509 NP_061992 17 4312 NP_258260 17 4312 NP_061761 17 4312 XP_006714867 17 4312 XP_006714866 17 4312 XP_005268581 17 4312 NP_061993 17 4312 NP_055490 16 5631 NP_065782 16 5631 NP_001229341 16 5631 XP_006726469 16 5631 XP_006713516 16 5631 XP_006711123 16 5631 XP_006711122 16 5631 XP_006711121 16 5631 XP_006711120 16 5631 XP_006711119 16 5631 NP_002430 16 7355 NP_852469 16 7355 NP_005641 16 7355 XP_006725846 16 7355 XP_006725845 16 7355 XP_006725844 16 7355 XP_005277014 16 7355 XP_005277013 16 7355 XP_005277012 16 7355 XP_005261781 16 7355 XP_005261780 16 7355 XP_006724377 16 7355 XP_006724376 16 7355 XP_005261779 16 7355 NP_003473 15 9605 NP_001158268 15 9605 NP_066008 15 9605 NP_079128 15 9605 NP_064506 15 9605 NP_775742 15 9605 NP_660289 15 9605 NP_061757 15 9605 NP_061759 15 9605 NP_061760 15 9605 NP_061758 15 9605 NP_056484 15 9605 NP_061763 15 9605 NP_001273327 15 9605 NP_803171 15 9605 XP_006719679 15 9605 XP_005269219 15 9605 XP_006719678 15 9605 XP_006719677 15 9605 XP_006718117 15 9605 XP_005269573 15 9605 XP_005269572 15 9605 XP_006715413 15 9605 XP_006713019 15 9605 XP_005270633 15 9605 XP_006710467 15 9605 XP_005270632 15 9605 NP_061762 15 9605 NP_061753 15 9605 NP_061754 15 9605>NP_001268421 Length = 1230 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TRLGASDR 8 TRLGASDR Sbjct: 1045 TRLGASDR 1052>NP_000170 Length = 1360 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TRLGASDR 8 TRLGASDR Sbjct: 1175 TRLGASDR 1182>NP_001268422 Length = 1058 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TRLGASDR 8 TRLGASDR Sbjct: 873 TRLGASDR 880>NP_001268423 Length = 1058 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TRLGASDR 8 TRLGASDR Sbjct: 873 TRLGASDR 880>XP_005264328 Length = 1261 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TRLGASDR 8 TRLGASDR Sbjct: 1076 TRLGASDR 1083>NP_061992 Length = 797 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RLGASDR 8 R+GASDR Sbjct: 530 RVGASDR 536>NP_258260 Length = 690 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TRLGASDR 8 TRL ASDR Sbjct: 99 TRLQASDR 106>NP_061761 Length = 795 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RLGASDR 8 R+GASDR Sbjct: 529 RVGASDR 535>XP_006714867 Length = 632 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TRLGASDR 8 TRL ASDR Sbjct: 99 TRLQASDR 106>XP_006714866 Length = 647 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TRLGASDR 8 TRL ASDR Sbjct: 99 TRLQASDR 106>XP_005268581 Length = 688 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TRLGASDR 8 TRL ASDR Sbjct: 97 TRLQASDR 104>NP_061993 Length = 801 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RLGASDR 8 R+GASDR Sbjct: 531 RVGASDR 537>NP_055490 Length = 2017 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRLGASDR 8 +RLG SDR Sbjct: 1668 SRLGLSDR 1675>NP_065782 Length = 719 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LGASDRT 9 LGASDR+ Sbjct: 577 LGASDRS 583>NP_001229341 Length = 701 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LGASDRT 9 LGASDR+ Sbjct: 559 LGASDRS 565>XP_006726469 Length = 175 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRLGASDRT 9 T +GA DRT Sbjct: 159 TGVGAEDRT 167Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRLGASDR 8 +R GASDR Sbjct: 48 SRRGASDR 55>XP_006713516 Length = 263 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRLGASDRT 9 T +GA DRT Sbjct: 247 TGVGAEDRT 255Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRLGASDR 8 +R GASDR Sbjct: 136 SRRGASDR 143>XP_006711123 Length = 1737 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRLGASDR 8 +RLG SDR Sbjct: 1630 SRLGLSDR 1637>XP_006711122 Length = 1918 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRLGASDR 8 +RLG SDR Sbjct: 1630 SRLGLSDR 1637>XP_006711121 Length = 1945 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRLGASDR 8 +RLG SDR Sbjct: 1596 SRLGLSDR 1603>XP_006711120 Length = 1972 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRLGASDR 8 +RLG SDR Sbjct: 1630 SRLGLSDR 1637>XP_006711119 Length = 1979 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TRLGASDR 8 +RLG SDR Sbjct: 1630 SRLGLSDR 1637>NP_002430 Length = 1137 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRLGASD 7 TR+GA+D Sbjct: 937 TRMGAAD 943>NP_852469 Length = 1938 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRLGASDR 8 TR+G +DR Sbjct: 892 TRIGRNDR 899>NP_005641 Length = 1960 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRLGASDR 8 TR+G +DR Sbjct: 892 TRIGRNDR 899>XP_006725846 Length = 1938 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRLGASDR 8 TR+G +DR Sbjct: 892 TRIGRNDR 899>XP_006725845 Length = 1949 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRLGASDR 8 TR+G +DR Sbjct: 892 TRIGRNDR 899>XP_006725844 Length = 1960 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRLGASDR 8 TR+G +DR Sbjct: 892 TRIGRNDR 899>XP_005277014 Length = 1938 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRLGASDR 8 TR+G +DR Sbjct: 892 TRIGRNDR 899>XP_005277013 Length = 1949 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRLGASDR 8 TR+G +DR Sbjct: 892 TRIGRNDR 899>XP_005277012 Length = 1960 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRLGASDR 8 TR+G +DR Sbjct: 892 TRIGRNDR 899>XP_005261781 Length = 1938 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRLGASDR 8 TR+G +DR Sbjct: 892 TRIGRNDR 899>XP_005261780 Length = 1949 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRLGASDR 8 TR+G +DR Sbjct: 892 TRIGRNDR 899>XP_006724377 Length = 1960 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRLGASDR 8 TR+G +DR Sbjct: 892 TRIGRNDR 899>XP_006724376 Length = 1960 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRLGASDR 8 TR+G +DR Sbjct: 892 TRIGRNDR 899>XP_005261779 Length = 1960 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TRLGASDR 8 TR+G +DR Sbjct: 892 TRIGRNDR 899>NP_003473 Length = 5537 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TRLGAS 6 TRLGAS Sbjct: 176 TRLGAS 181>NP_001158268 Length = 186 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LGASDRT 9 LGA DRT Sbjct: 168 LGAYDRT 174>NP_066008 Length = 776 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RLGASDR 8 R+GA+DR Sbjct: 530 RVGATDR 536>NP_079128 Length = 860 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRLGASDRT 9 TRL +DRT Sbjct: 714 TRLFCADRT 722>NP_064506 Length = 1516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RLGASDR 8 R+GA DR Sbjct: 1402 RIGAGDR 1408>NP_775742 Length = 274 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LGASDRT 9 LGA DRT Sbjct: 256 LGAYDRT 262>NP_660289 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLGASDRT 9 RLG +D+T Sbjct: 97 RLGENDKT 104>NP_061757 Length = 798 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RLGASDR 8 R+GA+DR Sbjct: 530 RVGATDR 536>NP_061759 Length = 798 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RLGASDR 8 R+GA+DR Sbjct: 532 RVGAADR 538>NP_061760 Length = 796 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RLGASDR 8 R+GA+DR Sbjct: 530 RVGATDR 536>NP_061758 Length = 787 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RLGASDR 8 R+GA+DR Sbjct: 530 RVGATDR 536>NP_056484 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RLGASDR 8 R+GA+DR Sbjct: 529 RVGATDR 535>NP_061763 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RLGASDR 8 R+GA+DR Sbjct: 530 RVGATDR 536>NP_001273327 Length = 542 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRLGASD 7 TR+GA+D Sbjct: 137 TRVGAAD 143>NP_803171 Length = 626 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRLGASDRT 9 TRL +DRT Sbjct: 480 TRLFCADRT 488>XP_006719679 Length = 5536 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TRLGAS 6 TRLGAS Sbjct: 176 TRLGAS 181>XP_005269219 Length = 5537 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TRLGAS 6 TRLGAS Sbjct: 176 TRLGAS 181>XP_006719678 Length = 5539 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TRLGAS 6 TRLGAS Sbjct: 176 TRLGAS 181>XP_006719677 Length = 5540 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TRLGAS 6 TRLGAS Sbjct: 176 TRLGAS 181>XP_006718117 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLGASDRT 9 RLG ++RT Sbjct: 69 RLGVAERT 76>XP_005269573 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLGASDRT 9 RLG +D+T Sbjct: 97 RLGENDKT 104>XP_005269572 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLGASDRT 9 RLG +D+T Sbjct: 97 RLGENDKT 104>XP_006715413 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRLGASD 7 TR+GA+D Sbjct: 137 TRVGAAD 143>XP_006713019 Length = 259 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LGASDRT 9 LGA DRT Sbjct: 241 LGAYDRT 247>XP_005270633 Length = 585 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRLGASDRT 9 TRL +DRT Sbjct: 439 TRLFCADRT 447>XP_006710467 Length = 626 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRLGASDRT 9 TRL +DRT Sbjct: 480 TRLFCADRT 488>XP_005270632 Length = 860 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TRLGASDRT 9 TRL +DRT Sbjct: 714 TRLFCADRT 722>NP_061762 Length = 794 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RLGASDR 8 R+GA+DR Sbjct: 528 RVGATDR 534>NP_061753 Length = 800 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RLGASDR 8 R+GA+DR Sbjct: 530 RVGATDR 536>NP_061754 Length = 797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RLGASDR 8 R+GA+DR Sbjct: 530 RVGATDR 536Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.124 0.329 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 441,805 Number of extensions: 645 Number of successful extensions: 68 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 68 Number of HSP's successfully gapped: 68 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |