Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001728 18 1482 NP_694540 18 1935 NP_001265552 18 1935 NP_001265553 18 1935 NP_006715 16 5631 NP_005913 16 5631 XP_005267046 16 5631 XP_005267045 16 5631 NP_940968 16 7355 NP_057308 16 7355 NP_789790 16 7355 NP_055642 16 7355 NP_075526 16 7355 XP_005258905 16 7355 XP_005267072 16 7355 XP_005248617 16 7355 XP_006714536 16 7355 XP_005245703 16 7355 XP_006711736 16 7355 XP_005245701 16 7355 XP_005245700 16 7355 NP_001271324 15 9605 NP_001035947 15 9605 NP_071890 15 9605 NP_112489 15 9605 NP_689966 15 9605 NP_064597 15 9605 XP_006720681 15 9605 XP_006720680 15 9605 XP_006720679 15 9605 XP_006720678 15 9605 XP_006720677 15 9605 XP_006718069 15 9605 XP_006715987 15 9605 XP_005250031 15 9605 XP_005250029 15 9605 XP_005250028 15 9605 XP_005250027 15 9605 XP_005249005 15 9605 XP_005249004 15 9605 XP_005249003 15 9605 XP_005249000 15 9605 XP_006710665 15 9605 NP_848643 15 9605>NP_001728 Length = 559 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RCIKMRM 8 RCIKMR+ Sbjct: 111 RCIKMRL 117>NP_694540 Length = 911 Score = 17.7 bits (34), Expect = 1935 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRCIKMR 7 T+C+KMR Sbjct: 468 TKCVKMR 474>NP_001265552 Length = 911 Score = 17.7 bits (34), Expect = 1935 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRCIKMR 7 T+C+KMR Sbjct: 468 TKCVKMR 474>NP_001265553 Length = 911 Score = 17.7 bits (34), Expect = 1935 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TRCIKMR 7 T+C+KMR Sbjct: 468 TKCVKMR 474>NP_006715 Length = 1558 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 CIKMRME 9 C+K+R+E Sbjct: 630 CLKLRLE 636>NP_005913 Length = 1608 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 CIKMRME 9 C+K+R+E Sbjct: 630 CLKLRLE 636>XP_005267046 Length = 1554 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 CIKMRME 9 C+K+R+E Sbjct: 630 CLKLRLE 636>XP_005267045 Length = 1604 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 CIKMRME 9 C+K+R+E Sbjct: 630 CLKLRLE 636>NP_940968 Length = 638 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 CIKMRM 8 C+KMR+ Sbjct: 420 CVKMRL 425>NP_057308 Length = 595 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IKMRME 9 IKMRME Sbjct: 324 IKMRME 329>NP_789790 Length = 991 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 CIKMRME 9 C+K R+E Sbjct: 346 CVKQRLE 352>NP_055642 Length = 810 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TRCIKMRME 9 T CIK++++ Sbjct: 429 TTCIKLKID 437>NP_075526 Length = 313 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RCIKMRME 9 +C+KM +E Sbjct: 262 KCVKMLLE 269>XP_005258905 Length = 903 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 CIKMRME 9 C+K R+E Sbjct: 255 CVKQRLE 261>XP_005267072 Length = 588 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IKMRME 9 IKMRME Sbjct: 317 IKMRME 322>XP_005248617 Length = 245 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RCIKMRME 9 +C+KM +E Sbjct: 194 KCVKMLLE 201>XP_006714536 Length = 524 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 CIKMRM 8 C+KMR+ Sbjct: 306 CVKMRL 311>XP_005245703 Length = 474 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TRCIKMRME 9 T CIK++++ Sbjct: 93 TTCIKLKID 101>XP_006711736 Length = 810 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TRCIKMRME 9 T CIK++++ Sbjct: 429 TTCIKLKID 437>XP_005245701 Length = 810 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TRCIKMRME 9 T CIK++++ Sbjct: 429 TTCIKLKID 437>XP_005245700 Length = 810 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TRCIKMRME 9 T CIK++++ Sbjct: 429 TTCIKLKID 437>NP_001271324 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TRCIKMRM 8 T CIKM + Sbjct: 194 TTCIKMEI 201>NP_001035947 Length = 194 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 TRCIKM 6 T+C+KM Sbjct: 102 TKCLKM 107>NP_071890 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 TRCIKM 6 T+C+KM Sbjct: 102 TKCLKM 107>NP_112489 Length = 364 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 CIKMRME 9 C+K RM+ Sbjct: 95 CVKTRMQ 101>NP_689966 Length = 993 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 CIKMRME 9 C++ RME Sbjct: 571 CLRQRME 577>NP_064597 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TRCIKMRM 8 T CIKM + Sbjct: 194 TTCIKMEI 201>XP_006720681 Length = 468 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TRCIKMRM 8 T CIKM + Sbjct: 194 TTCIKMEI 201>XP_006720680 Length = 608 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TRCIKMRM 8 T CIKM + Sbjct: 194 TTCIKMEI 201>XP_006720679 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TRCIKMRM 8 T CIKM + Sbjct: 194 TTCIKMEI 201>XP_006720678 Length = 696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TRCIKMRM 8 T CIKM + Sbjct: 194 TTCIKMEI 201>XP_006720677 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TRCIKMRM 8 T CIKM + Sbjct: 194 TTCIKMEI 201>XP_006718069 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 CIKMRME 9 C+K RM+ Sbjct: 95 CVKTRMQ 101>XP_006715987 Length = 170 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 TRCIKM 6 T+C+KM Sbjct: 102 TKCLKM 107>XP_005250031 Length = 188 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 TRCIKM 6 T+C+KM Sbjct: 47 TKCLKM 52>XP_005250029 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 TRCIKM 6 T+C+KM Sbjct: 102 TKCLKM 107>XP_005250028 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 TRCIKM 6 T+C+KM Sbjct: 102 TKCLKM 107>XP_005250027 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 TRCIKM 6 T+C+KM Sbjct: 102 TKCLKM 107>XP_005249005 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 CIKMRME 9 C++ RME Sbjct: 109 CLRQRME 115>XP_005249004 Length = 955 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 CIKMRME 9 C++ RME Sbjct: 587 CLRQRME 593>XP_005249003 Length = 987 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 CIKMRME 9 C++ RME Sbjct: 565 CLRQRME 571>XP_005249000 Length = 1009 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 CIKMRME 9 C++ RME Sbjct: 587 CLRQRME 593>XP_006710665 Length = 479 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RCIKMRME 9 RC++ R+E Sbjct: 307 RCLRERLE 314>NP_848643 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RCIKMRME 9 RC++ R+E Sbjct: 270 RCLRERLE 277Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.342 0.136 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 552,112 Number of extensions: 486 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |