Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 390 XP_006718908 20 390 XP_005271621 20 390 XP_006718907 20 390 XP_006718906 20 390 XP_005271619 20 390 XP_005271618 20 390 NP_001274734 17 3301 NP_001020787 17 3301 XP_005263320 17 3301 NP_112595 17 3301 NP_001036134 17 3301 NP_004841 16 5631 NP_001186306 16 5631 NP_055977 16 5631 NP_065143 16 5631 NP_872415 16 5631 NP_055310 16 5631 XP_005258920 16 5631 XP_005258919 16 5631 XP_005258917 16 5631 XP_005260050 16 5631 XP_005260049 16 5631 XP_005246247 16 5631 NP_001231514 16 7355 NP_919289 16 7355 NP_001231513 16 7355 NP_001257572 16 7355 NP_057103 16 7355 XP_005269164 16 7355 XP_006716827 16 7355 XP_005251508 16 7355 XP_005251507 16 7355 NP_620710 16 7355 NP_003067 16 7355 NP_689812 15 9605 NP_002613 15 9605 NP_001094891 15 9605 NP_060166 15 9605 XP_005268522 15 9605>NP_000042 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TQQKIKYS 8 TQQKIKYS Sbjct: 1577 TQQKIKYS 1584>XP_006718908 Length = 1708 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TQQKIKYS 8 TQQKIKYS Sbjct: 229 TQQKIKYS 236>XP_005271621 Length = 2708 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TQQKIKYS 8 TQQKIKYS Sbjct: 1229 TQQKIKYS 1236>XP_006718907 Length = 3050 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TQQKIKYS 8 TQQKIKYS Sbjct: 1571 TQQKIKYS 1578>XP_006718906 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TQQKIKYS 8 TQQKIKYS Sbjct: 1577 TQQKIKYS 1584>XP_005271619 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TQQKIKYS 8 TQQKIKYS Sbjct: 1577 TQQKIKYS 1584>XP_005271618 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TQQKIKYS 8 TQQKIKYS Sbjct: 1577 TQQKIKYS 1584>NP_001274734 Length = 663 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TQQKIKYSS 9 T+QKI+Y S Sbjct: 571 TKQKIEYES 579>NP_001020787 Length = 748 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TQQKIKYSS 9 T+QKI+Y S Sbjct: 656 TKQKIEYES 664>XP_005263320 Length = 748 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TQQKIKYSS 9 T+QKI+Y S Sbjct: 656 TKQKIEYES 664>NP_112595 Length = 655 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TQQKIKYSS 9 T+QKI+Y S Sbjct: 563 TKQKIEYES 571>NP_001036134 Length = 653 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TQQKIKYSS 9 T+QKI+Y S Sbjct: 561 TKQKIEYES 569>NP_004841 Length = 1388 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TQQKIKY 7 TQQ IKY Sbjct: 1078 TQQMIKY 1084>NP_001186306 Length = 720 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TQQKIKYSS 9 TQ+K+K SS Sbjct: 37 TQEKLKTSS 45>NP_055977 Length = 724 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TQQKIKYSS 9 TQ+K+K SS Sbjct: 37 TQEKLKTSS 45>NP_065143 Length = 1204 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 QKIKYS 8 QKIKYS Sbjct: 175 QKIKYS 180>NP_872415 Length = 584 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QQKIKYSS 9 + KIKYSS Sbjct: 575 ETKIKYSS 582>NP_055310 Length = 460 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QQKIKY 7 QQK+KY Sbjct: 135 QQKVKY 140>XP_005258920 Length = 548 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QQKIKYSS 9 + KIKYSS Sbjct: 539 ETKIKYSS 546>XP_005258919 Length = 548 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QQKIKYSS 9 + KIKYSS Sbjct: 539 ETKIKYSS 546>XP_005258917 Length = 584 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QQKIKYSS 9 + KIKYSS Sbjct: 575 ETKIKYSS 582>XP_005260050 Length = 1227 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 QKIKYS 8 QKIKYS Sbjct: 175 QKIKYS 180>XP_005260049 Length = 1242 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 QKIKYS 8 QKIKYS Sbjct: 175 QKIKYS 180>XP_005246247 Length = 1417 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TQQKIKY 7 TQQ IKY Sbjct: 1078 TQQMIKY 1084>NP_001231514 Length = 389 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TQQKIKYS 8 T+Q+IK+S Sbjct: 21 TRQRIKFS 28>NP_919289 Length = 1368 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QQKIKY 7 QQK+KY Sbjct: 778 QQKLKY 783>NP_001231513 Length = 458 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TQQKIKYS 8 T+Q+IK+S Sbjct: 90 TRQRIKFS 97>NP_001257572 Length = 391 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TQQKIKYS 8 T+Q+IK+S Sbjct: 23 TRQRIKFS 30>NP_057103 Length = 392 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TQQKIKYS 8 T+Q+IK+S Sbjct: 24 TRQRIKFS 31>XP_005269164 Length = 598 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TQQKIKYSS 9 T+QK K+SS Sbjct: 310 TKQKRKFSS 318>XP_006716827 Length = 910 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QQKIKY 7 QQK+KY Sbjct: 320 QQKLKY 325>XP_005251508 Length = 1007 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QQKIKY 7 QQK+KY Sbjct: 417 QQKLKY 422>XP_005251507 Length = 1079 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 QQKIKY 7 QQK+KY Sbjct: 489 QQKLKY 494>NP_620710 Length = 474 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TQQKIKYSS 9 T+QK K+SS Sbjct: 227 TKQKRKFSS 235>NP_003067 Length = 515 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TQQKIKYSS 9 T+QK K+SS Sbjct: 227 TKQKRKFSS 235>NP_689812 Length = 586 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 QQKIKYS 8 ++KIKYS Sbjct: 548 ERKIKYS 554>NP_002613 Length = 122 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TQQKIK 6 TQQK+K Sbjct: 23 TQQKVK 28>NP_001094891 Length = 1022 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QQKIKYSS 9 +QKI+YS+ Sbjct: 916 KQKIEYSA 923>NP_060166 Length = 1143 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TQQKIKYSS 9 +QQ+I YS+ Sbjct: 691 SQQEINYST 699>XP_005268522 Length = 115 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TQQKIK 6 TQQK+K Sbjct: 23 TQQKVK 28Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.296 0.106 0.250 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 552,739 Number of extensions: 1031 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |