Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001895 19 665 NP_001091680 19 665 NP_001091679 19 665 XP_006713048 19 665 XP_005264943 19 665 NP_071353 18 1482 XP_005257627 18 1482 XP_005270302 17 3301 NP_056082 17 4312 NP_004860 17 4312 NP_005015 17 4312 XP_006722645 17 4312 XP_006719362 17 4312 NP_055490 16 5631 NP_689916 16 5631 NP_597707 16 5631 NP_001229858 16 5631 XP_005255178 16 5631 XP_005255176 16 5631 XP_006715953 16 5631 XP_006715952 16 5631 XP_005250250 16 5631 XP_006715951 16 5631 XP_005250248 16 5631 XP_006711123 16 5631 XP_006711122 16 5631 XP_006711121 16 5631 XP_006711120 16 5631 XP_006711119 16 5631 NP_002788 16 7355 NP_001138404 16 7355 XP_005267928 16 7355 NP_000375 15 9605 NP_036433 15 9605 NP_001264057 15 9605 NP_955452 15 9605 NP_078920 15 9605 XP_005250782 15 9605 XP_006713543 15 9605>NP_001895 Length = 781 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TQADLMEL 8 TQADLMEL Sbjct: 3 TQADLMEL 10>NP_001091680 Length = 781 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TQADLMEL 8 TQADLMEL Sbjct: 3 TQADLMEL 10>NP_001091679 Length = 781 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TQADLMEL 8 TQADLMEL Sbjct: 3 TQADLMEL 10>XP_006713048 Length = 720 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TQADLMEL 8 TQADLMEL Sbjct: 3 TQADLMEL 10>XP_005264943 Length = 781 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TQADLMEL 8 TQADLMEL Sbjct: 3 TQADLMEL 10>NP_071353 Length = 1181 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQADLMELG 9 TQA LMELG Sbjct: 706 TQAYLMELG 714>XP_005257627 Length = 1013 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TQADLMELG 9 TQA LMELG Sbjct: 538 TQAYLMELG 546>XP_005270302 Length = 105 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TQADLMELG 9 T AD+M+LG Sbjct: 6 TGADMMDLG 14>NP_056082 Length = 1486 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TQADLMEL 8 TQA+L+EL Sbjct: 217 TQAELLEL 224>NP_004860 Length = 444 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TQADLMELG 9 T+AD ELG Sbjct: 322 TEADFRELG 330>NP_005015 Length = 397 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TQADLMEL 8 T AD+MEL Sbjct: 277 TSADMMEL 284>XP_006722645 Length = 326 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TQADLMELG 9 T+AD ELG Sbjct: 204 TEADFRELG 212>XP_006719362 Length = 1546 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TQADLMEL 8 TQA+L+EL Sbjct: 277 TQAELLEL 284>NP_055490 Length = 2017 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TQADLMELG 9 T+ DL++LG Sbjct: 317 TERDLLQLG 325>NP_689916 Length = 1584 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TQADLMELG 9 T+ DL+E+G Sbjct: 51 TEKDLVEMG 59>NP_597707 Length = 656 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TQADLMELG 9 T++DL E+G Sbjct: 460 TESDLKEIG 468>NP_001229858 Length = 549 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TQADLMELG 9 T++DL E+G Sbjct: 353 TESDLKEIG 361>XP_005255178 Length = 450 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TQADLMELG 9 T++DL E+G Sbjct: 254 TESDLKEIG 262>XP_005255176 Length = 527 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TQADLMELG 9 T++DL E+G Sbjct: 331 TESDLKEIG 339>XP_006715953 Length = 1584 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TQADLMELG 9 T+ DL+E+G Sbjct: 51 TEKDLVEMG 59>XP_006715952 Length = 1584 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TQADLMELG 9 T+ DL+E+G Sbjct: 51 TEKDLVEMG 59>XP_005250250 Length = 1584 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TQADLMELG 9 T+ DL+E+G Sbjct: 51 TEKDLVEMG 59>XP_006715951 Length = 1584 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TQADLMELG 9 T+ DL+E+G Sbjct: 51 TEKDLVEMG 59>XP_005250248 Length = 1584 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TQADLMELG 9 T+ DL+E+G Sbjct: 51 TEKDLVEMG 59>XP_006711123 Length = 1737 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TQADLMELG 9 T+ DL++LG Sbjct: 279 TERDLLQLG 287>XP_006711122 Length = 1918 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TQADLMELG 9 T+ DL++LG Sbjct: 279 TERDLLQLG 287>XP_006711121 Length = 1945 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TQADLMELG 9 T+ DL++LG Sbjct: 245 TERDLLQLG 253>XP_006711120 Length = 1972 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TQADLMELG 9 T+ DL++LG Sbjct: 279 TERDLLQLG 287>XP_006711119 Length = 1979 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TQADLMELG 9 T+ DL++LG Sbjct: 279 TERDLLQLG 287>NP_002788 Length = 263 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QADLMELG 9 +ADL++LG Sbjct: 24 RADLLDLG 31>NP_001138404 Length = 203 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QADLMELG 9 +ADL++LG Sbjct: 24 RADLLDLG 31>XP_005267928 Length = 169 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QADLMELG 9 +ADL++LG Sbjct: 24 RADLLDLG 31>NP_000375 Length = 4563 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ADLMELG 9 ADL+E+G Sbjct: 685 ADLIEIG 691>NP_036433 Length = 1455 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TQADLMEL 8 TQA+LM L Sbjct: 599 TQAELMTL 606>NP_001264057 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TQADLMELG 9 T AD+ E+G Sbjct: 99 TTADMKEMG 107>NP_955452 Length = 2590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QADLMELG 9 Q DL+E+G Sbjct: 888 QQDLVEMG 895>NP_078920 Length = 641 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 QADLMEL 8 QAD MEL Sbjct: 591 QADAMEL 597>XP_005250782 Length = 1441 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TQADLMEL 8 TQA+LM L Sbjct: 599 TQAELMTL 606>XP_006713543 Length = 2591 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QADLMELG 9 Q DL+E+G Sbjct: 889 QQDLVEMG 896Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.129 0.334 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 407,071 Number of extensions: 661 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |