Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_065681 20 299 NP_066124 20 299 XP_006717999 20 299 NP_776253 17 3301 XP_005245126 17 3301 NP_003326 17 4312 XP_005265487 17 4312 XP_006713384 17 4312 NP_005480 16 5631 NP_001239263 16 5631 NP_001136004 16 5631 NP_001136005 16 5631 NP_733745 16 5631 NP_001136003 16 5631 NP_001136006 16 5631 NP_115524 16 5631 XP_005269237 16 5631 XP_005269236 16 5631 XP_005269235 16 5631 XP_006719693 16 5631 XP_005269233 16 5631 XP_005251694 16 5631 XP_005251696 16 5631 NP_066956 16 7355 NP_001070979 16 7355 NP_009040 16 7355 NP_001008487 16 7355 NP_001008486 16 7355 NP_001008485 16 7355 NP_060899 16 7355 NP_060306 16 7355 NP_116246 16 7355 NP_001157947 16 7355 XP_006726172 16 7355 XP_006726171 16 7355 XP_006726170 16 7355 XP_005275645 16 7355 XP_006726078 16 7355 XP_006726077 16 7355 XP_006726076 16 7355 XP_005275507 16 7355 XP_005275506 16 7355 XP_006725983 16 7355 XP_005275346 16 7355 XP_005275344 16 7355 XP_006725889 16 7355 XP_005275214 16 7355 XP_005275212 16 7355 XP_006725775 16 7355 XP_006725774 16 7355 XP_005275077 16 7355 XP_005275075 16 7355 XP_006725561 16 7355 XP_005272924 16 7355 XP_006725524 16 7355 XP_006725523 16 7355 XP_005276828 16 7355 XP_006726279 16 7355 XP_006715234 16 7355 XP_006715233 16 7355 XP_005249391 16 7355 XP_006714722 16 7355 XP_006714721 16 7355 XP_005247622 16 7355 XP_005247621 16 7355 XP_006713744 16 7355 XP_005247620 16 7355 XP_005247619 16 7355 XP_005247618 16 7355 XP_005247617 16 7355 XP_005247616 16 7355 NP_938080 15 9605 NP_003977 15 9605 XP_005253220 15 9605 XP_006718407 15 9605 XP_005253218 15 9605 XP_005253217 15 9605 XP_005253216 15 9605 NP_001129396 15 9605>NP_065681 Length = 1072 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TMGDLITFA 9 TMGDLI+FA Sbjct: 847 TMGDLISFA 855>NP_066124 Length = 1114 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TMGDLITFA 9 TMGDLI+FA Sbjct: 847 TMGDLISFA 855>XP_006717999 Length = 1207 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TMGDLITFA 9 TMGDLI+FA Sbjct: 940 TMGDLISFA 948>NP_776253 Length = 513 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMGDLITFA 9 ++GDLIT A Sbjct: 260 SLGDLITLA 268>XP_005245126 Length = 513 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TMGDLITFA 9 ++GDLIT A Sbjct: 260 SLGDLITLA 268>NP_003326 Length = 1012 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GDLITFA 9 GDL+TF+ Sbjct: 206 GDLVTFS 212>XP_005265487 Length = 987 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GDLITFA 9 GDL+TF+ Sbjct: 206 GDLVTFS 212>XP_006713384 Length = 1005 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GDLITFA 9 GDL+TF+ Sbjct: 206 GDLVTFS 212>NP_005480 Length = 703 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMGDLITFA 9 TMG++ +FA Sbjct: 521 TMGNMFSFA 529>NP_001239263 Length = 792 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMGDLITFA 9 TMG++ +FA Sbjct: 610 TMGNMFSFA 618>NP_001136004 Length = 506 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMGDLITFA 9 TMG++ +FA Sbjct: 324 TMGNMFSFA 332>NP_001136005 Length = 702 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMGDLITFA 9 TMG++ +FA Sbjct: 520 TMGNMFSFA 528>NP_733745 Length = 860 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMGDLITFA 9 TMG++ +FA Sbjct: 678 TMGNMFSFA 686>NP_001136003 Length = 506 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMGDLITFA 9 TMG++ +FA Sbjct: 324 TMGNMFSFA 332>NP_001136006 Length = 700 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMGDLITFA 9 TMG++ +FA Sbjct: 518 TMGNMFSFA 526>NP_115524 Length = 573 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMGDLITFA 9 + GDLIT A Sbjct: 321 SFGDLITLA 329>XP_005269237 Length = 527 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMGDLITFA 9 + GDLIT A Sbjct: 321 SFGDLITLA 329>XP_005269236 Length = 573 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMGDLITFA 9 + GDLIT A Sbjct: 321 SFGDLITLA 329>XP_005269235 Length = 573 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMGDLITFA 9 + GDLIT A Sbjct: 321 SFGDLITLA 329>XP_006719693 Length = 573 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMGDLITFA 9 + GDLIT A Sbjct: 321 SFGDLITLA 329>XP_005269233 Length = 573 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TMGDLITFA 9 + GDLIT A Sbjct: 321 SFGDLITLA 329>XP_005251694 Length = 822 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMGDLITFA 9 TMG++ +FA Sbjct: 640 TMGNMFSFA 648>XP_005251696 Length = 506 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMGDLITFA 9 TMG++ +FA Sbjct: 324 TMGNMFSFA 332>NP_066956 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TMGDLITF 8 T+GDL+ F Sbjct: 658 TVGDLLKF 665>NP_001070979 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GDL+TF Sbjct: 99 GDLLTF 104>NP_009040 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GDL+TF Sbjct: 99 GDLLTF 104>NP_001008487 Length = 461 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMGDLITFA 9 ++GDLIT + Sbjct: 201 SLGDLITLS 209>NP_001008486 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMGDLITFA 9 ++GDLIT + Sbjct: 191 SLGDLITLS 199>NP_001008485 Length = 507 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMGDLITFA 9 ++GDLIT + Sbjct: 227 SLGDLITLS 235>NP_060899 Length = 2624 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TMGDLI 6 TMGDL+ Sbjct: 1991 TMGDLV 1996>NP_060306 Length = 487 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMGDLITFA 9 ++GDLIT + Sbjct: 227 SLGDLITLS 235>NP_116246 Length = 547 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TMGDLITF 8 T+GDL+ F Sbjct: 403 TVGDLLKF 410>NP_001157947 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMGDLITFA 9 ++GDLIT + Sbjct: 110 SLGDLITLS 118>XP_006726172 Length = 200 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GDL+TF Sbjct: 99 GDLLTF 104>XP_006726171 Length = 268 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GDL+TF Sbjct: 99 GDLLTF 104>XP_006726170 Length = 298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GDL+TF Sbjct: 99 GDLLTF 104>XP_005275645 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GDL+TF Sbjct: 99 GDLLTF 104>XP_006726078 Length = 200 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GDL+TF Sbjct: 99 GDLLTF 104>XP_006726077 Length = 268 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GDL+TF Sbjct: 99 GDLLTF 104>XP_006726076 Length = 298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GDL+TF Sbjct: 99 GDLLTF 104>XP_005275507 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GDL+TF Sbjct: 99 GDLLTF 104>XP_005275506 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GDL+TF Sbjct: 99 GDLLTF 104>XP_006725983 Length = 200 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GDL+TF Sbjct: 99 GDLLTF 104>XP_005275346 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GDL+TF Sbjct: 99 GDLLTF 104>XP_005275344 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GDL+TF Sbjct: 99 GDLLTF 104>XP_006725889 Length = 200 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GDL+TF Sbjct: 99 GDLLTF 104>XP_005275214 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GDL+TF Sbjct: 99 GDLLTF 104>XP_005275212 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GDL+TF Sbjct: 99 GDLLTF 104>XP_006725775 Length = 200 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GDL+TF Sbjct: 99 GDLLTF 104>XP_006725774 Length = 296 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GDL+TF Sbjct: 99 GDLLTF 104>XP_005275077 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GDL+TF Sbjct: 99 GDLLTF 104>XP_005275075 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GDL+TF Sbjct: 99 GDLLTF 104>XP_006725561 Length = 298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GDL+TF Sbjct: 99 GDLLTF 104>XP_005272924 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GDL+TF Sbjct: 99 GDLLTF 104>XP_006725524 Length = 2584 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TMGDLI 6 TMGDL+ Sbjct: 1991 TMGDLV 1996>XP_006725523 Length = 2623 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TMGDLI 6 TMGDL+ Sbjct: 1991 TMGDLV 1996>XP_005276828 Length = 2584 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TMGDLI 6 TMGDL+ Sbjct: 1991 TMGDLV 1996>XP_006726279 Length = 2623 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TMGDLI 6 TMGDL+ Sbjct: 1991 TMGDLV 1996>XP_006715234 Length = 268 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GDL+TF Sbjct: 99 GDLLTF 104>XP_006715233 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GDL+TF Sbjct: 99 GDLLTF 104>XP_005249391 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GDL+TF Sbjct: 99 GDLLTF 104>XP_006714722 Length = 2584 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TMGDLI 6 TMGDL+ Sbjct: 1991 TMGDLV 1996>XP_006714721 Length = 2623 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TMGDLI 6 TMGDL+ Sbjct: 1991 TMGDLV 1996>XP_005247622 Length = 481 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMGDLITFA 9 ++GDLIT + Sbjct: 201 SLGDLITLS 209>XP_005247621 Length = 502 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMGDLITFA 9 ++GDLIT + Sbjct: 242 SLGDLITLS 250>XP_006713744 Length = 507 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMGDLITFA 9 ++GDLIT + Sbjct: 227 SLGDLITLS 235>XP_005247620 Length = 507 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMGDLITFA 9 ++GDLIT + Sbjct: 227 SLGDLITLS 235>XP_005247619 Length = 507 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMGDLITFA 9 ++GDLIT + Sbjct: 227 SLGDLITLS 235>XP_005247618 Length = 507 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMGDLITFA 9 ++GDLIT + Sbjct: 227 SLGDLITLS 235>XP_005247617 Length = 522 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMGDLITFA 9 ++GDLIT + Sbjct: 242 SLGDLITLS 250>XP_005247616 Length = 522 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TMGDLITFA 9 ++GDLIT + Sbjct: 242 SLGDLITLS 250>NP_938080 Length = 603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GD+ITF Sbjct: 230 GDVITF 235>NP_003977 Length = 387 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GD+ITF Sbjct: 335 GDVITF 340>XP_005253220 Length = 387 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GD+ITF Sbjct: 335 GDVITF 340>XP_006718407 Length = 387 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GD+ITF Sbjct: 335 GDVITF 340>XP_005253218 Length = 387 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GD+ITF Sbjct: 335 GDVITF 340>XP_005253217 Length = 387 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GD+ITF Sbjct: 335 GDVITF 340>XP_005253216 Length = 387 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GD+ITF Sbjct: 335 GDVITF 340>NP_001129396 Length = 1590 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 GDLITF 8 GD++TF Sbjct: 487 GDIVTF 492Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.143 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 471,807 Number of extensions: 760 Number of successful extensions: 79 Number of sequences better than 10000.0: 79 Number of HSP's gapped: 79 Number of HSP's successfully gapped: 79 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |