Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005148 20 509 NP_009297 20 509 NP_001161710 20 509 NP_001161709 20 509 NP_001161708 20 509 NP_009298 20 509 NP_001129473 20 509 NP_005149 20 509 NP_001161711 20 509 XP_005245145 20 509 NP_001129472 20 509 NP_000474 17 4312 XP_005245103 16 5631 XP_005245102 16 5631 NP_002013 16 5631 NP_001265444 16 7355 NP_001274456 16 7355 NP_852147 16 7355 NP_852146 16 7355 NP_078968 16 7355 NP_954639 16 7355 NP_954638 16 7355 NP_954640 16 7355 NP_001242905 16 7355 NP_064567 16 7355 NP_001003675 16 7355 NP_001263178 16 7355 NP_001003674 16 7355 NP_001263180 16 7355 XP_006722418 16 7355 XP_006722417 16 7355 XP_006722416 16 7355 XP_006722415 16 7355 XP_006722414 16 7355 XP_006722413 16 7355 XP_005258197 16 7355 XP_006712168 16 7355 XP_005264621 16 7355 XP_005264620 16 7355 XP_006712167 16 7355 XP_005264619 16 7355 NP_001274457 16 7355 NP_060811 15 9605 NP_001265460 15 9605 NP_001265462 15 9605 NP_001258604 15 9605 NP_840056 15 9605 NP_055642 15 9605 NP_005190 15 9605 NP_002355 15 9605 XP_006725074 15 9605 XP_006725073 15 9605 XP_006716018 15 9605 XP_006715573 15 9605 XP_006715572 15 9605 XP_006711736 15 9605 XP_005245701 15 9605 XP_005245700 15 9605 NP_002535 15 9605>NP_005148 Length = 1130 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TLSITKGEE 9 TLSITKGE+ Sbjct: 79 TLSITKGEK 87>NP_009297 Length = 1149 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TLSITKGEE 9 TLSITKGE+ Sbjct: 98 TLSITKGEK 106>NP_001161710 Length = 1058 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TLSITKGEE 9 TLSITKGE+ Sbjct: 104 TLSITKGEK 112>NP_001161709 Length = 1079 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TLSITKGEE 9 TLSITKGE+ Sbjct: 125 TLSITKGEK 133>NP_001161708 Length = 1161 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TLSITKGEE 9 TLSITKGE+ Sbjct: 104 TLSITKGEK 112>NP_009298 Length = 1182 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TLSITKGEE 9 TLSITKGE+ Sbjct: 125 TLSITKGEK 133>NP_001129473 Length = 542 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TLSITKGEE 9 TLSITKGE+ Sbjct: 104 TLSITKGEK 112>NP_005149 Length = 1167 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TLSITKGEE 9 TLSITKGE+ Sbjct: 110 TLSITKGEK 118>NP_001161711 Length = 1043 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TLSITKGEE 9 TLSITKGE+ Sbjct: 89 TLSITKGEK 97>XP_005245145 Length = 1146 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TLSITKGEE 9 TLSITKGE+ Sbjct: 89 TLSITKGEK 97>NP_001129472 Length = 1064 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TLSITKGEE 9 TLSITKGE+ Sbjct: 110 TLSITKGEK 118>NP_000474 Length = 101 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSITKGEE 9 LS+ KGEE Sbjct: 94 LSVLKGEE 101>XP_005245103 Length = 495 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSITKGEE 9 LSITKG++ Sbjct: 208 LSITKGKK 215>XP_005245102 Length = 508 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSITKGEE 9 LSITKG++ Sbjct: 221 LSITKGKK 228>NP_002013 Length = 558 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LSITKGEE 9 LSITKG++ Sbjct: 271 LSITKGKK 278>NP_001265444 Length = 136 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SITKGEE 9 S+T+GEE Sbjct: 63 SVTEGEE 69>NP_001274456 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLSITKGEE 9 TLS+ GEE Sbjct: 402 TLSLPPGEE 410>NP_852147 Length = 288 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSITKGEE 9 T+S++ GEE Sbjct: 153 TISLSDGEE 161>NP_852146 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSITKGEE 9 T+S++ GEE Sbjct: 171 TISLSDGEE 179>NP_078968 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLSITKGEE 9 TLS+ GEE Sbjct: 402 TLSLPPGEE 410>NP_954639 Length = 237 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSITKGEE 9 T+S++ GEE Sbjct: 99 TISLSDGEE 107>NP_954638 Length = 252 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSITKGEE 9 T+S++ GEE Sbjct: 114 TISLSDGEE 122>NP_954640 Length = 237 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSITKGEE 9 T+S++ GEE Sbjct: 99 TISLSDGEE 107>NP_001242905 Length = 259 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSITKGEE 9 T+S++ GEE Sbjct: 121 TISLSDGEE 129>NP_064567 Length = 287 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSITKGEE 9 T+S++ GEE Sbjct: 149 TISLSDGEE 157>NP_001003675 Length = 251 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSITKGEE 9 T+S++ GEE Sbjct: 116 TISLSDGEE 124>NP_001263178 Length = 229 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSITKGEE 9 T+S++ GEE Sbjct: 94 TISLSDGEE 102>NP_001003674 Length = 269 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSITKGEE 9 T+S++ GEE Sbjct: 134 TISLSDGEE 142>NP_001263180 Length = 208 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSITKGEE 9 T+S++ GEE Sbjct: 73 TISLSDGEE 81>XP_006722418 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSITKGEE 9 T+S++ GEE Sbjct: 171 TISLSDGEE 179>XP_006722417 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSITKGEE 9 T+S++ GEE Sbjct: 171 TISLSDGEE 179>XP_006722416 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSITKGEE 9 T+S++ GEE Sbjct: 171 TISLSDGEE 179>XP_006722415 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSITKGEE 9 T+S++ GEE Sbjct: 171 TISLSDGEE 179>XP_006722414 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSITKGEE 9 T+S++ GEE Sbjct: 171 TISLSDGEE 179>XP_006722413 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSITKGEE 9 T+S++ GEE Sbjct: 171 TISLSDGEE 179>XP_005258197 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLSITKGEE 9 T+S++ GEE Sbjct: 171 TISLSDGEE 179>XP_006712168 Length = 596 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLSITKGEE 9 TLS+ GEE Sbjct: 402 TLSLPPGEE 410>XP_005264621 Length = 687 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLSITKGEE 9 TLS+ GEE Sbjct: 384 TLSLPPGEE 392>XP_005264620 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLSITKGEE 9 TLS+ GEE Sbjct: 402 TLSLPPGEE 410>XP_006712167 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLSITKGEE 9 TLS+ GEE Sbjct: 402 TLSLPPGEE 410>XP_005264619 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLSITKGEE 9 TLS+ GEE Sbjct: 402 TLSLPPGEE 410>NP_001274457 Length = 599 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLSITKGEE 9 TLS+ GEE Sbjct: 402 TLSLPPGEE 410>NP_060811 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LSITKGE 8 LS+TKG+ Sbjct: 83 LSLTKGQ 89>NP_001265460 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LSITKGE 8 LS+TKG+ Sbjct: 83 LSLTKGQ 89>NP_001265462 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LSITKGE 8 LS+TKG+ Sbjct: 83 LSLTKGQ 89>NP_001258604 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLSITKGEE 9 TLS +GEE Sbjct: 265 TLSTKQGEE 273>NP_840056 Length = 230 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSITKGEE 9 LSIT+G++ Sbjct: 147 LSITQGQQ 154>NP_055642 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLSITKGEE 9 TLS +GEE Sbjct: 265 TLSTKQGEE 273>NP_005190 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SITKGEE 9 SIT GEE Sbjct: 382 SITTGEE 388>NP_002355 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SITKGE 8 S+TKGE Sbjct: 131 SVTKGE 136>XP_006725074 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LSITKGE 8 LS+TKG+ Sbjct: 93 LSLTKGQ 99>XP_006725073 Length = 688 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LSITKGE 8 LS+TKG+ Sbjct: 93 LSLTKGQ 99>XP_006716018 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSITKGEE 9 LSIT+G++ Sbjct: 174 LSITQGQQ 181>XP_006715573 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LSITKGE 8 LS+TKG+ Sbjct: 93 LSLTKGQ 99>XP_006715572 Length = 688 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LSITKGE 8 LS+TKG+ Sbjct: 93 LSLTKGQ 99>XP_006711736 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLSITKGEE 9 TLS +GEE Sbjct: 265 TLSTKQGEE 273>XP_005245701 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLSITKGEE 9 TLS +GEE Sbjct: 265 TLSTKQGEE 273>XP_005245700 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLSITKGEE 9 TLS +GEE Sbjct: 265 TLSTKQGEE 273>NP_002535 Length = 440 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TLSITKG 7 TLSIT G Sbjct: 379 TLSITSG 385Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.292 0.118 0.280 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 521,368 Number of extensions: 711 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |