Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 18 1482 NP_001263689 18 1482 NP_001119584 18 1482 NP_001119590 18 1482 NP_001263690 18 1482 NP_001119587 18 1482 NP_001263626 18 1482 NP_002174 18 1482 NP_001254642 18 1482 XP_005274838 18 1482 XP_005274837 18 1482 XP_005274489 18 1482 XP_005274488 18 1482 NP_000250 17 4312 NP_001135967 17 4312 XP_005254459 17 4312 XP_005254458 17 4312 XP_005254457 17 4312 XP_005254456 17 4312 XP_005254455 17 4312 XP_005254454 17 4312 NP_002068 16 7355 XP_006717126 16 7355 XP_005251986 16 7355 XP_006717125 16 7355 NP_001243415 15 9605 NP_001243417 15 9605 NP_004478 15 9605 NP_001243416 15 9605 NP_001159611 15 9605 NP_001269282 15 9605 NP_000879 15 9605 NP_001041687 15 9605 NP_060948 15 9605 NP_001041686 15 9605 NP_001041689 15 9605 NP_001269318 15 9605 NP_001269317 15 9605 NP_115816 15 9605 NP_001164237 15 9605 NP_001041690 15 9605 NP_001164236 15 9605 NP_001041691 15 9605 NP_680545 15 9605 NP_680544 15 9605 NP_775922 15 9605 NP_001269283 15 9605 NP_001269284 15 9605 NP_001184069 15 9605 NP_001184068 15 9605 XP_006718097 15 9605 XP_006718096 15 9605 XP_006717822 15 9605 XP_006717821 15 9605 XP_005269749 15 9605 XP_006717820 15 9605 XP_006713654 15 9605 XP_006713653 15 9605 XP_005247430 15 9605 XP_005247429 15 9605 XP_006713652 15 9605 XP_006713651 15 9605 XP_006713650 15 9605 XP_005247428 15 9605 XP_006711533 15 9605 XP_005245422 15 9605 NP_001041688 15 9605 NP_065081 15 9605 NP_065821 15 9605>NP_000537 Length = 393 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLQIRVRER 9 TLQIR RER Sbjct: 329 TLQIRGRER 337>NP_001263689 Length = 354 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLQIRVRER 9 TLQIR RER Sbjct: 290 TLQIRGRER 298>NP_001119584 Length = 393 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLQIRVRER 9 TLQIR RER Sbjct: 329 TLQIRGRER 337>NP_001119590 Length = 354 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLQIRVRER 9 TLQIR RER Sbjct: 290 TLQIRGRER 298>NP_001263690 Length = 354 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLQIRVRER 9 TLQIR RER Sbjct: 290 TLQIRGRER 298>NP_001119587 Length = 261 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLQIRVRER 9 TLQIR RER Sbjct: 197 TLQIRGRER 205>NP_001263626 Length = 234 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLQIRVRER 9 TLQIR RER Sbjct: 170 TLQIRGRER 178>NP_002174 Length = 378 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TLQIRVRER 9 T+QIR RER Sbjct: 269 TVQIRARER 277>NP_001254642 Length = 300 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TLQIRVRER 9 T+QIR RER Sbjct: 191 TVQIRARER 199>XP_005274838 Length = 377 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TLQIRVRER 9 T+QIR RER Sbjct: 268 TVQIRARER 276>XP_005274837 Length = 378 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TLQIRVRER 9 T+QIR RER Sbjct: 269 TVQIRARER 277>XP_005274489 Length = 377 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TLQIRVRER 9 T+QIR RER Sbjct: 268 TVQIRARER 276>XP_005274488 Length = 378 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TLQIRVRER 9 T+QIR RER Sbjct: 269 TVQIRARER 277>NP_000250 Length = 1855 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TLQIRVRER 9 T+Q+R+R+R Sbjct: 1803 TIQMRLRDR 1811>NP_001135967 Length = 1828 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TLQIRVRER 9 T+Q+R+R+R Sbjct: 1776 TIQMRLRDR 1784>XP_005254459 Length = 1825 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TLQIRVRER 9 T+Q+R+R+R Sbjct: 1773 TIQMRLRDR 1781>XP_005254458 Length = 1852 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TLQIRVRER 9 T+Q+R+R+R Sbjct: 1800 TIQMRLRDR 1808>XP_005254457 Length = 1853 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TLQIRVRER 9 T+Q+R+R+R Sbjct: 1801 TIQMRLRDR 1809>XP_005254456 Length = 1877 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TLQIRVRER 9 T+Q+R+R+R Sbjct: 1825 TIQMRLRDR 1833>XP_005254455 Length = 1880 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TLQIRVRER 9 T+Q+R+R+R Sbjct: 1828 TIQMRLRDR 1836>XP_005254454 Length = 1880 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TLQIRVRER 9 T+Q+R+R+R Sbjct: 1828 TIQMRLRDR 1836>NP_002068 Length = 767 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLQIRVRE 8 TL+ RVRE Sbjct: 351 TLETRVRE 358>XP_006717126 Length = 767 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLQIRVRE 8 TL+ RVRE Sbjct: 351 TLETRVRE 358>XP_005251986 Length = 767 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLQIRVRE 8 TL+ RVRE Sbjct: 351 TLETRVRE 358>XP_006717125 Length = 767 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLQIRVRE 8 TL+ RVRE Sbjct: 351 TLETRVRE 358>NP_001243415 Length = 3269 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQIRVRE 8 LQI+VRE Sbjct: 1241 LQIQVRE 1247>NP_001243417 Length = 3184 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQIRVRE 8 LQI+VRE Sbjct: 1161 LQIQVRE 1167>NP_004478 Length = 3259 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQIRVRE 8 LQI+VRE Sbjct: 1236 LQIQVRE 1242>NP_001243416 Length = 3225 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQIRVRE 8 LQI+VRE Sbjct: 1202 LQIQVRE 1208>NP_001159611 Length = 602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLQIRVRER 9 TL+ +V+ER Sbjct: 557 TLEYKVKER 565>NP_001269282 Length = 788 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TLQIRVRE 8 TLQ+ VR+ Sbjct: 120 TLQVHVRQ 127>NP_000879 Length = 788 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TLQIRVRE 8 TLQ+ VR+ Sbjct: 120 TLQVHVRQ 127>NP_001041687 Length = 112 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QIRVRER 9 Q+R+RER Sbjct: 13 QLRLRER 19>NP_060948 Length = 259 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QIRVRER 9 Q+R+RER Sbjct: 111 QLRLRER 117>NP_001041686 Length = 161 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QIRVRER 9 Q+R+RER Sbjct: 13 QLRLRER 19>NP_001041689 Length = 112 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QIRVRER 9 Q+R+RER Sbjct: 13 QLRLRER 19>NP_001269318 Length = 715 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TLQIRVRE 8 TLQ+ VR+ Sbjct: 47 TLQVHVRQ 54>NP_001269317 Length = 746 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TLQIRVRE 8 TLQ+ VR+ Sbjct: 78 TLQVHVRQ 85>NP_115816 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLQIRVRER 9 TL+ +V+ER Sbjct: 381 TLEYKVKER 389>NP_001164237 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLQIRVRER 9 TL+ +V+ER Sbjct: 381 TLEYKVKER 389>NP_001041690 Length = 263 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QIRVRER 9 Q+R+RER Sbjct: 115 QLRLRER 121>NP_001164236 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLQIRVRER 9 TL+ +V+ER Sbjct: 381 TLEYKVKER 389>NP_001041691 Length = 214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QIRVRER 9 Q+R+RER Sbjct: 115 QLRLRER 121>NP_680545 Length = 163 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TLQIRVRE 8 TL++RVR+ Sbjct: 25 TLEMRVRD 32>NP_680544 Length = 163 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TLQIRVRE 8 TL++RVR+ Sbjct: 25 TLEMRVRD 32>NP_775922 Length = 6996 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TLQIRVR 7 TL+IR+R Sbjct: 5733 TLEIRIR 5739>NP_001269283 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TLQIRVRE 8 TLQ+ VR+ Sbjct: 25 TLQVHVRQ 32>NP_001269284 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TLQIRVRE 8 TLQ+ VR+ Sbjct: 120 TLQVHVRQ 127>NP_001184069 Length = 161 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QIRVRER 9 Q+R+RER Sbjct: 13 QLRLRER 19>NP_001184068 Length = 161 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QIRVRER 9 Q+R+RER Sbjct: 13 QLRLRER 19>XP_006718097 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLQIRVRER 9 TL+ +V+ER Sbjct: 381 TLEYKVKER 389>XP_006718096 Length = 593 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TLQIRVRER 9 TL+ +V+ER Sbjct: 541 TLEYKVKER 549>XP_006717822 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LQIRVRE 8 +Q+RVRE Sbjct: 160 VQVRVRE 166>XP_006717821 Length = 846 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LQIRVRE 8 +Q+RVRE Sbjct: 160 VQVRVRE 166>XP_005269749 Length = 901 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LQIRVRE 8 +Q+RVRE Sbjct: 160 VQVRVRE 166>XP_006717820 Length = 949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LQIRVRE 8 +Q+RVRE Sbjct: 160 VQVRVRE 166>XP_006713654 Length = 3189 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQIRVRE 8 LQI+VRE Sbjct: 1161 LQIQVRE 1167>XP_006713653 Length = 3223 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQIRVRE 8 LQI+VRE Sbjct: 1200 LQIQVRE 1206>XP_005247430 Length = 3228 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQIRVRE 8 LQI+VRE Sbjct: 1200 LQIQVRE 1206>XP_005247429 Length = 3230 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQIRVRE 8 LQI+VRE Sbjct: 1202 LQIQVRE 1208>XP_006713652 Length = 3263 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQIRVRE 8 LQI+VRE Sbjct: 1235 LQIQVRE 1241>XP_006713651 Length = 3264 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQIRVRE 8 LQI+VRE Sbjct: 1236 LQIQVRE 1242>XP_006713650 Length = 3264 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQIRVRE 8 LQI+VRE Sbjct: 1241 LQIQVRE 1247>XP_005247428 Length = 3269 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LQIRVRE 8 LQI+VRE Sbjct: 1241 LQIQVRE 1247>XP_006711533 Length = 747 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QIRVRER 9 Q+R+RER Sbjct: 489 QLRLRER 495>XP_005245422 Length = 1203 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QIRVRER 9 Q+R+RER Sbjct: 489 QLRLRER 495>NP_001041688 Length = 161 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QIRVRER 9 Q+R+RER Sbjct: 13 QLRLRER 19>NP_065081 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LQIRVRE 8 +Q+RVRE Sbjct: 160 VQVRVRE 166>NP_065821 Length = 1203 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QIRVRER 9 Q+R+RER Sbjct: 489 QLRLRER 495Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.144 0.358 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 411,418 Number of extensions: 760 Number of successful extensions: 69 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 69 Number of HSP's successfully gapped: 69 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |