Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001002254 17 3301 NP_940873 17 4312 XP_006722781 17 4312 XP_005272524 17 4312 NP_001161860 16 5631 NP_006070 16 5631 NP_001161861 16 5631 NP_001129663 16 5631 NP_056308 16 5631 NP_055973 16 5631 NP_001243805 16 5631 NP_694856 16 5631 NP_001243806 16 5631 NP_055524 16 5631 NP_996844 16 5631 XP_005254439 16 5631 XP_006720568 16 5631 XP_005254438 16 5631 XP_006716810 16 5631 XP_005251476 16 5631 XP_005251475 16 5631 XP_005251473 16 5631 XP_005251474 16 5631 XP_005251472 16 5631 XP_005251471 16 5631 XP_005251470 16 5631 XP_006716809 16 5631 XP_006716808 16 5631 XP_006716807 16 5631 XP_006716806 16 5631 XP_005251468 16 5631 XP_005251467 16 5631 NP_002335 16 5631 NP_001278262 15 9605 NP_004614 15 9605 NP_079229 15 9605 XP_005253995 15 9605 XP_006719669 15 9605 XP_005268463 15 9605 XP_005268461 15 9605 XP_005247896 15 9605 XP_005275806 15 9605>NP_001002254 Length = 333 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 MALQHG 9 MALQHG Sbjct: 211 MALQHG 216>NP_940873 Length = 821 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMMALQHG 9 LM+A+ HG Sbjct: 700 LMLAISHG 707>XP_006722781 Length = 821 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMMALQHG 9 LM+A+ HG Sbjct: 700 LMLAISHG 707>XP_005272524 Length = 872 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMMALQHG 9 LM+A+ HG Sbjct: 751 LMLAISHG 758>NP_001161860 Length = 270 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 MMALQHG 9 MMA+ HG Sbjct: 5 MMAMNHG 11>NP_006070 Length = 270 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 MMALQHG 9 MMA+ HG Sbjct: 5 MMAMNHG 11>NP_001161861 Length = 275 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 MMALQHG 9 MMA+ HG Sbjct: 10 MMAMNHG 16>NP_001129663 Length = 851 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMMALQHG 9 LM+A+ HG Sbjct: 743 LMLAVSHG 750>NP_056308 Length = 859 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMMALQHG 9 LM+A+ HG Sbjct: 751 LMLAVSHG 758>NP_055973 Length = 1352 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMMALQHG 9 LM+A+ HG Sbjct: 1238 LMLAVSHG 1245>NP_001243805 Length = 1352 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMMALQHG 9 LM+A+ HG Sbjct: 1238 LMLAVSHG 1245>NP_694856 Length = 1194 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMMALQHG 9 LM+A+ HG Sbjct: 1080 LMLAVSHG 1087>NP_001243806 Length = 1352 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMMALQHG 9 LM+A+ HG Sbjct: 1238 LMLAVSHG 1245>NP_055524 Length = 3546 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TLMMALQHG 9 TL++ ++HG Sbjct: 2423 TLLLIMEHG 2431>NP_996844 Length = 803 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLMMALQHG 9 TL+ AL HG Sbjct: 450 TLLRALGHG 458>XP_005254439 Length = 475 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLMMALQHG 9 TL+ AL HG Sbjct: 122 TLLRALGHG 130>XP_006720568 Length = 771 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLMMALQHG 9 TL+ AL HG Sbjct: 418 TLLRALGHG 426>XP_005254438 Length = 819 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLMMALQHG 9 TL+ AL HG Sbjct: 466 TLLRALGHG 474>XP_006716810 Length = 1206 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMMALQHG 9 LM+A+ HG Sbjct: 1080 LMLAVSHG 1087>XP_005251476 Length = 1206 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMMALQHG 9 LM+A+ HG Sbjct: 1080 LMLAVSHG 1087>XP_005251475 Length = 1206 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMMALQHG 9 LM+A+ HG Sbjct: 1080 LMLAVSHG 1087>XP_005251473 Length = 1206 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMMALQHG 9 LM+A+ HG Sbjct: 1080 LMLAVSHG 1087>XP_005251474 Length = 1206 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMMALQHG 9 LM+A+ HG Sbjct: 1080 LMLAVSHG 1087>XP_005251472 Length = 1206 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMMALQHG 9 LM+A+ HG Sbjct: 1080 LMLAVSHG 1087>XP_005251471 Length = 1206 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMMALQHG 9 LM+A+ HG Sbjct: 1080 LMLAVSHG 1087>XP_005251470 Length = 1284 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMMALQHG 9 LM+A+ HG Sbjct: 1158 LMLAVSHG 1165>XP_006716809 Length = 1334 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMMALQHG 9 LM+A+ HG Sbjct: 1220 LMLAVSHG 1227>XP_006716808 Length = 1346 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMMALQHG 9 LM+A+ HG Sbjct: 1220 LMLAVSHG 1227>XP_006716807 Length = 1352 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMMALQHG 9 LM+A+ HG Sbjct: 1238 LMLAVSHG 1245>XP_006716806 Length = 1364 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMMALQHG 9 LM+A+ HG Sbjct: 1238 LMLAVSHG 1245>XP_005251468 Length = 1364 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMMALQHG 9 LM+A+ HG Sbjct: 1238 LMLAVSHG 1245>XP_005251467 Length = 1364 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMMALQHG 9 LM+A+ HG Sbjct: 1238 LMLAVSHG 1245>NP_002335 Length = 864 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TLMMALQHG 9 TL+ AL HG Sbjct: 511 TLLRALGHG 519>NP_001278262 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TLMMALQH 8 TL+ LQH Sbjct: 246 TLLQVLQH 253>NP_004614 Length = 387 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TLMMALQH 8 TL+ LQH Sbjct: 345 TLLQVLQH 352>NP_079229 Length = 972 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LMMALQHG 9 LM+ QHG Sbjct: 442 LMLRYQHG 449>XP_005253995 Length = 836 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LMMALQHG 9 LM+ QHG Sbjct: 306 LMLRYQHG 313>XP_006719669 Length = 944 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LMMALQHG 9 LM+ QHG Sbjct: 414 LMLRYQHG 421>XP_005268463 Length = 1063 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TLMMALQHG 9 TL+ A +HG Sbjct: 14 TLLQAEEHG 22>XP_005268461 Length = 1096 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TLMMALQHG 9 TL+ A +HG Sbjct: 14 TLLQAEEHG 22>XP_005247896 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LMMALQH 8 +MM LQH Sbjct: 15 MMMPLQH 21>XP_005275806 Length = 249 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMMALQHG 9 LM+A+ HG Sbjct: 153 LMLAICHG 160Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.333 0.132 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 393,864 Number of extensions: 520 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |