Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002515 19 869 NP_001107228 17 2528 NP_001244918 17 2528 NP_001107227 17 2528 NP_001944 17 2528 NP_001244917 17 2528 NP_006377 17 3301 NP_001091974 17 3301 NP_003144 16 7355 NP_001171549 16 7355 NP_001171550 16 7355 NP_004154 16 7355 NP_001171551 16 7355 NP_001171552 16 7355 XP_006722581 16 7355 XP_005266791 16 7355 XP_005266790 16 7355 XP_006719638 16 7355 XP_006719637 16 7355 XP_006719636 16 7355 NP_699207 16 7355 NP_006378 15 9605>NP_002515 Length = 189 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TKQARELAK 9 TKQA ELAK Sbjct: 127 TKQAHELAK 135>NP_001107228 Length = 482 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KQARELAK 9 +QARELAK Sbjct: 246 EQARELAK 253>NP_001244918 Length = 487 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KQARELAK 9 +QARELAK Sbjct: 246 EQARELAK 253>NP_001107227 Length = 482 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KQARELAK 9 +QARELAK Sbjct: 246 EQARELAK 253>NP_001944 Length = 482 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KQARELAK 9 +QARELAK Sbjct: 246 EQARELAK 253>NP_001244917 Length = 482 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 KQARELAK 9 +QARELAK Sbjct: 246 EQARELAK 253>NP_006377 Length = 729 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KQARELAK 9 KQAREL K Sbjct: 528 KQARELIK 535>NP_001091974 Length = 731 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KQARELAK 9 KQAREL K Sbjct: 528 KQARELIK 535>NP_003144 Length = 847 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KQARELA 8 KQAREL+ Sbjct: 319 KQARELS 325>NP_001171549 Length = 847 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KQARELA 8 KQAREL+ Sbjct: 319 KQARELS 325>NP_001171550 Length = 847 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KQARELA 8 KQAREL+ Sbjct: 319 KQARELS 325>NP_004154 Length = 218 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KQARELA 8 +QARELA Sbjct: 146 RQARELA 152>NP_001171551 Length = 737 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KQARELA 8 KQAREL+ Sbjct: 209 KQARELS 215>NP_001171552 Length = 737 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KQARELA 8 KQAREL+ Sbjct: 209 KQARELS 215>XP_006722581 Length = 182 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KQARELA 8 +QARELA Sbjct: 146 RQARELA 152>XP_005266791 Length = 218 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KQARELA 8 +QARELA Sbjct: 146 RQARELA 152>XP_005266790 Length = 218 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KQARELA 8 +QARELA Sbjct: 146 RQARELA 152>XP_006719638 Length = 847 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KQARELA 8 KQAREL+ Sbjct: 319 KQARELS 325>XP_006719637 Length = 847 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KQARELA 8 KQAREL+ Sbjct: 319 KQARELS 325>XP_006719636 Length = 847 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KQARELA 8 KQAREL+ Sbjct: 319 KQARELS 325>NP_699207 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TKQARE 6 TKQARE Sbjct: 481 TKQARE 486>NP_006378 Length = 916 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KQAREL 7 KQAREL Sbjct: 228 KQAREL 233Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.302 0.111 0.254 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 360,177 Number of extensions: 598 Number of successful extensions: 22 Number of sequences better than 10000.0: 22 Number of HSP's gapped: 22 Number of HSP's successfully gapped: 22 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |