Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001013433 20 299 NP_060785 20 299 NP_361014 20 299 XP_005247844 17 3301 NP_079094 17 3301 NP_938143 17 3301 NP_997634 17 4312 NP_001268 17 4312 NP_001273385 17 4312 XP_005249342 17 4312 NP_056297 17 4312 NP_055751 16 5631 NP_848638 16 5631 NP_000439 16 5631 NP_057270 16 5631 NP_001094077 16 5631 NP_115618 16 5631 XP_006725227 16 5631 XP_006725226 16 5631 XP_005277842 16 5631 XP_005267790 16 5631 XP_006720222 16 5631 XP_005253098 16 5631 XP_006713726 16 5631 NP_065194 16 7355 NP_659486 16 7355 NP_079023 15 9605 NP_006028 15 9605 NP_001137247 15 9605 NP_056216 15 9605 NP_056158 15 9605 NP_001091886 15 9605 NP_001269804 15 9605 NP_001269803 15 9605 NP_001248770 15 9605 NP_003060 15 9605 NP_059984 15 9605 XP_006724893 15 9605 XP_005274763 15 9605 XP_006724892 15 9605 XP_005274762 15 9605 XP_006724845 15 9605 XP_005262519 15 9605 XP_005262518 15 9605 XP_005255642 15 9605 XP_006719521 15 9605 XP_006719520 15 9605 XP_006719519 15 9605 XP_005269025 15 9605 XP_006719518 15 9605 XP_006719517 15 9605 XP_006712943 15 9605 XP_006712942 15 9605 XP_006712941 15 9605 XP_006712940 15 9605 NP_001098719 15 9605 NP_001098718 15 9605 NP_079056 15 9605 NP_699207 15 9605>NP_001013433 Length = 589 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TKLLLLDFD 9 TKLL+LDFD Sbjct: 577 TKLLVLDFD 585>NP_060785 Length = 627 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TKLLLLDFD 9 TKLL+LDFD Sbjct: 615 TKLLVLDFD 623>NP_361014 Length = 707 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TKLLLLDFD 9 TKLL+LDFD Sbjct: 695 TKLLVLDFD 703>XP_005247844 Length = 348 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLLLLDFD 9 KLLL D+D Sbjct: 43 KLLLFDYD 50>NP_079094 Length = 404 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLLLLDFD 9 KLLL D+D Sbjct: 99 KLLLFDYD 106>NP_938143 Length = 348 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLLLLDFD 9 KLLL D+D Sbjct: 43 KLLLFDYD 50>NP_997634 Length = 439 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KLLLLDFD 9 KL+L+DF+ Sbjct: 307 KLMLIDFE 314>NP_001268 Length = 457 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KLLLLDFD 9 KL+L+DF+ Sbjct: 325 KLMLIDFE 332>NP_001273385 Length = 361 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLLLDFD 9 LLLLD+D Sbjct: 75 LLLLDYD 81>XP_005249342 Length = 694 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLLLDFD 9 LLLLD+D Sbjct: 75 LLLLDYD 81>NP_056297 Length = 686 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LLLLDFD 9 LLLLD+D Sbjct: 75 LLLLDYD 81>NP_055751 Length = 453 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLLLLDFD 9 KLLL+ FD Sbjct: 27 KLLLVSFD 34>NP_848638 Length = 458 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLLLLDFD 9 KLLL+ FD Sbjct: 32 KLLLVSFD 39>NP_000439 Length = 1043 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TKLLLLDF 8 TKLL +DF Sbjct: 276 TKLLAVDF 283>NP_057270 Length = 444 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TKLLLLDF 8 TKL+L+D+ Sbjct: 228 TKLILVDY 235>NP_001094077 Length = 444 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TKLLLLDF 8 TKL+L+D+ Sbjct: 228 TKLILVDY 235>NP_115618 Length = 1896 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KLLLLDF 8 KLLLLD+ Sbjct: 116 KLLLLDY 122>XP_006725227 Length = 444 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TKLLLLDF 8 TKL+L+D+ Sbjct: 228 TKLILVDY 235>XP_006725226 Length = 484 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TKLLLLDF 8 TKL+L+D+ Sbjct: 268 TKLILVDY 275>XP_005277842 Length = 468 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLLLLDFD 9 KLLL+ FD Sbjct: 105 KLLLVSFD 112>XP_005267790 Length = 444 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TKLLLLDF 8 TKL+L+D+ Sbjct: 228 TKLILVDY 235>XP_006720222 Length = 484 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TKLLLLDF 8 TKL+L+D+ Sbjct: 268 TKLILVDY 275>XP_005253098 Length = 1043 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TKLLLLDF 8 TKLL +DF Sbjct: 276 TKLLAVDF 283>XP_006713726 Length = 1910 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KLLLLDF 8 KLLLLD+ Sbjct: 134 KLLLLDY 140>NP_065194 Length = 1819 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLLLLDFD 9 K+L+L FD Sbjct: 69 KILMLSFD 76>NP_659486 Length = 318 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLLLLDFD 9 KLL+LD D Sbjct: 138 KLLVLDVD 145>NP_079023 Length = 775 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LLLLDF 8 LLLLDF Sbjct: 280 LLLLDF 285>NP_006028 Length = 1084 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TKLLLLDFD 9 +K+L++D+D Sbjct: 832 SKILIVDWD 840>NP_001137247 Length = 244 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLLLLDFD 9 K+L+LD D Sbjct: 62 KILVLDLD 69>NP_056216 Length = 991 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TKLLLLDFD 9 +K+L++D+D Sbjct: 738 SKILIVDWD 746>NP_056158 Length = 244 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLLLLDFD 9 K+L+LD D Sbjct: 62 KILVLDLD 69>NP_001091886 Length = 954 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TKLLLLDFD 9 +K+L++D+D Sbjct: 701 SKILIVDWD 709>NP_001269804 Length = 1058 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TKLLLLDFD 9 TK+L+ D D Sbjct: 428 TKILMKDID 436>NP_001269803 Length = 1070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TKLLLLDFD 9 TK+L+ D D Sbjct: 428 TKILMKDID 436>NP_001248770 Length = 1006 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KLLLLDF 8 +LLL+DF Sbjct: 735 RLLLMDF 741>NP_003060 Length = 1054 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TKLLLLDFD 9 TK+L+ D D Sbjct: 428 TKILMKDID 436>NP_059984 Length = 1871 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KLLLLDF 8 KLLL+D+ Sbjct: 98 KLLLIDY 104>XP_006724893 Length = 1719 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KLLLLDF 8 KLLL+D+ Sbjct: 98 KLLLIDY 104>XP_005274763 Length = 1789 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KLLLLDF 8 KLLL+D+ Sbjct: 16 KLLLIDY 22>XP_006724892 Length = 1841 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KLLLLDF 8 KLLL+D+ Sbjct: 98 KLLLIDY 104>XP_005274762 Length = 1853 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KLLLLDF 8 KLLL+D+ Sbjct: 98 KLLLIDY 104>XP_006724845 Length = 1042 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TKLLLLDFD 9 TK+L+ D D Sbjct: 428 TKILMKDID 436>XP_005262519 Length = 1048 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TKLLLLDFD 9 TK+L+ D D Sbjct: 428 TKILMKDID 436>XP_005262518 Length = 1054 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TKLLLLDFD 9 TK+L+ D D Sbjct: 428 TKILMKDID 436>XP_005255642 Length = 647 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KLLLLDF 8 +LLL+DF Sbjct: 376 RLLLMDF 382>XP_006719521 Length = 944 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TKLLLLDFD 9 +K+L++D+D Sbjct: 691 SKILIVDWD 699>XP_006719520 Length = 950 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TKLLLLDFD 9 +K+L++D+D Sbjct: 697 SKILIVDWD 705>XP_006719519 Length = 968 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TKLLLLDFD 9 +K+L++D+D Sbjct: 715 SKILIVDWD 723>XP_005269025 Length = 974 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TKLLLLDFD 9 +K+L++D+D Sbjct: 721 SKILIVDWD 729>XP_006719518 Length = 981 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TKLLLLDFD 9 +K+L++D+D Sbjct: 728 SKILIVDWD 736>XP_006719517 Length = 1005 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TKLLLLDFD 9 +K+L++D+D Sbjct: 752 SKILIVDWD 760>XP_006712943 Length = 1062 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TKLLLLDFD 9 +K+L++D+D Sbjct: 810 SKILIVDWD 818>XP_006712942 Length = 1062 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TKLLLLDFD 9 +K+L++D+D Sbjct: 810 SKILIVDWD 818>XP_006712941 Length = 1089 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TKLLLLDFD 9 +K+L++D+D Sbjct: 837 SKILIVDWD 845>XP_006712940 Length = 1108 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TKLLLLDFD 9 +K+L++D+D Sbjct: 856 SKILIVDWD 864>NP_001098719 Length = 948 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KLLLLDF 8 +LLL+DF Sbjct: 735 RLLLMDF 741>NP_001098718 Length = 1006 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KLLLLDF 8 +LLL+DF Sbjct: 735 RLLLMDF 741>NP_079056 Length = 760 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KLLLLDF 8 +LLL+DF Sbjct: 489 RLLLMDF 495>NP_699207 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LLLLDFD 9 LLL+DF+ Sbjct: 403 LLLIDFE 409Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.334 0.158 0.436 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 488,794 Number of extensions: 747 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |