Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001155973 20 299 NP_055903 20 299 NP_055309 17 2528 XP_006721103 17 2528 XP_005255314 17 2528 XP_006721102 17 2528 XP_005255313 17 2528 XP_005255312 17 2528 XP_006721101 17 2528 XP_005255311 17 2528 XP_005255310 17 2528 NP_660305 17 4312 NP_828847 17 4312 NP_563615 17 4312 XP_006713041 17 4312 NP_004509 16 5631 NP_742106 16 5631 NP_742105 16 5631 NP_742104 16 5631 NP_742107 16 5631 NP_114431 16 5631 XP_006723855 16 5631 XP_006723854 16 5631 XP_006723853 16 5631 XP_006723852 16 5631 XP_006723851 16 5631 XP_006723850 16 5631 XP_005272168 16 5631 XP_005272166 16 5631 XP_005272164 16 5631 XP_005272163 16 5631 XP_005272162 16 5631 XP_005272160 16 5631 XP_006714780 16 5631 NP_001180270 16 7355 NP_689945 16 7355 NP_001161707 16 7355 XP_006715076 16 7355 XP_005248958 16 7355 NP_036421 15 9605 NP_987096 15 9605 NP_036284 15 9605 NP_001014440 15 9605 NP_036205 15 9605 XP_006724480 15 9605 XP_005261978 15 9605 XP_006724479 15 9605 XP_005261975 15 9605 XP_006724478 15 9605 XP_005260231 15 9605 XP_005260230 15 9605 XP_006710605 15 9605 NP_857597 15 9605 NP_001025052 15 9605>NP_001155973 Length = 1833 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TILSRTDLD 9 T+LSRTDLD Sbjct: 606 TLLSRTDLD 614>NP_055903 Length = 1723 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TILSRTDLD 9 T+LSRTDLD Sbjct: 606 TLLSRTDLD 614>NP_055309 Length = 1962 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 TILSRTDLD 9 +I++RTDLD Sbjct: 706 SIVNRTDLD 714>XP_006721103 Length = 1597 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 TILSRTDLD 9 +I++RTDLD Sbjct: 674 SIVNRTDLD 682>XP_005255314 Length = 1709 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 TILSRTDLD 9 +I++RTDLD Sbjct: 453 SIVNRTDLD 461>XP_006721102 Length = 1820 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 TILSRTDLD 9 +I++RTDLD Sbjct: 564 SIVNRTDLD 572>XP_005255313 Length = 1822 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 TILSRTDLD 9 +I++RTDLD Sbjct: 674 SIVNRTDLD 682>XP_005255312 Length = 1871 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 TILSRTDLD 9 +I++RTDLD Sbjct: 674 SIVNRTDLD 682>XP_006721101 Length = 1907 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 TILSRTDLD 9 +I++RTDLD Sbjct: 674 SIVNRTDLD 682>XP_005255311 Length = 1913 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 TILSRTDLD 9 +I++RTDLD Sbjct: 706 SIVNRTDLD 714>XP_005255310 Length = 1919 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 TILSRTDLD 9 +I++RTDLD Sbjct: 674 SIVNRTDLD 682>NP_660305 Length = 523 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TILSRTDLD 9 T+LSR D D Sbjct: 286 TVLSRADSD 294>NP_828847 Length = 509 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TILSRTD 7 T+LSRTD Sbjct: 101 TLLSRTD 107>NP_563615 Length = 775 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TILSRTD 7 T+LSRTD Sbjct: 717 TLLSRTD 723>XP_006713041 Length = 396 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TILSRTDLD 9 T+LSR D D Sbjct: 159 TVLSRADSD 167>NP_004509 Length = 844 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TILSRTDL 8 T LSRTDL Sbjct: 349 TNLSRTDL 356>NP_742106 Length = 841 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TILSRTDL 8 T LSRTDL Sbjct: 349 TNLSRTDL 356>NP_742105 Length = 872 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TILSRTDL 8 T LSRTDL Sbjct: 349 TNLSRTDL 356>NP_742104 Length = 854 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TILSRTDL 8 T LSRTDL Sbjct: 349 TNLSRTDL 356>NP_742107 Length = 393 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TILSRTDL 8 T LSRTDL Sbjct: 349 TNLSRTDL 356>NP_114431 Length = 416 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILSRTDLD 9 +LSR DLD Sbjct: 37 LLSRIDLD 44>XP_006723855 Length = 856 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TILSRTDL 8 T LSRTDL Sbjct: 349 TNLSRTDL 356>XP_006723854 Length = 858 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TILSRTDL 8 T LSRTDL Sbjct: 349 TNLSRTDL 356>XP_006723853 Length = 868 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TILSRTDL 8 T LSRTDL Sbjct: 349 TNLSRTDL 356>XP_006723852 Length = 876 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TILSRTDL 8 T LSRTDL Sbjct: 349 TNLSRTDL 356>XP_006723851 Length = 885 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TILSRTDL 8 T LSRTDL Sbjct: 349 TNLSRTDL 356>XP_006723850 Length = 886 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TILSRTDL 8 T LSRTDL Sbjct: 349 TNLSRTDL 356>XP_005272168 Length = 279 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILSRTDLD 9 +LSR DLD Sbjct: 37 LLSRIDLD 44>XP_005272166 Length = 325 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILSRTDLD 9 +LSR DLD Sbjct: 37 LLSRIDLD 44>XP_005272164 Length = 343 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILSRTDLD 9 +LSR DLD Sbjct: 37 LLSRIDLD 44>XP_005272163 Length = 343 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILSRTDLD 9 +LSR DLD Sbjct: 37 LLSRIDLD 44>XP_005272162 Length = 352 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILSRTDLD 9 +LSR DLD Sbjct: 37 LLSRIDLD 44>XP_005272160 Length = 388 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILSRTDLD 9 +LSR DLD Sbjct: 37 LLSRIDLD 44>XP_006714780 Length = 416 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILSRTDLD 9 +LSR DLD Sbjct: 37 LLSRIDLD 44>NP_001180270 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TILSRTDLD 9 T+L + DLD Sbjct: 185 TLLEKADLD 193>NP_689945 Length = 276 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TILSRTDLD 9 T+L + DLD Sbjct: 200 TLLEKADLD 208>NP_001161707 Length = 2139 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ILSRTDLD 9 +LS TD+D Sbjct: 566 VLSATDID 573>XP_006715076 Length = 206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TILSRTDLD 9 T+L + DLD Sbjct: 85 TLLEKADLD 93>XP_005248958 Length = 321 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TILSRTDLD 9 T+L + DLD Sbjct: 200 TLLEKADLD 208>NP_036421 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TILSRTDLD 9 T++SR DL+ Sbjct: 230 TLISRDDLN 238>NP_987096 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TILSRTDLD 9 T++SR DL+ Sbjct: 230 TLISRDDLN 238>NP_036284 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TILSRTD 7 T+LSR+D Sbjct: 326 TVLSRSD 332>NP_001014440 Length = 253 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TILSRTDL 8 TIL+RT L Sbjct: 203 TILARTSL 210>NP_036205 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TILSRTDLD 9 TILS D+D Sbjct: 76 TILSMMDVD 84>XP_006724480 Length = 178 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TILSRTDL 8 TIL+RT L Sbjct: 128 TILARTSL 135>XP_005261978 Length = 185 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TILSRTDL 8 TIL+RT L Sbjct: 135 TILARTSL 142>XP_006724479 Length = 204 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TILSRTDL 8 TIL+RT L Sbjct: 163 TILARTSL 170>XP_005261975 Length = 253 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TILSRTDL 8 TIL+RT L Sbjct: 203 TILARTSL 210>XP_006724478 Length = 272 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TILSRTDL 8 TIL+RT L Sbjct: 231 TILARTSL 238>XP_005260231 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TILSRTDLD 9 T++SR DL+ Sbjct: 230 TLISRDDLN 238>XP_005260230 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TILSRTDLD 9 T++SR DL+ Sbjct: 230 TLISRDDLN 238>XP_006710605 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TILSRTD 7 T+LSR+D Sbjct: 326 TVLSRSD 332>NP_857597 Length = 1349 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TILSRTDLD 9 TIL+ TD D Sbjct: 1015 TILADTDCD 1023>NP_001025052 Length = 185 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ILSRTDLD 9 +LS +DLD Sbjct: 147 VLSESDLD 154Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.136 0.348 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 410,603 Number of extensions: 517 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |