Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 18 1482 NP_001263689 18 1482 NP_001119584 18 1482 NP_001119586 18 1482 NP_001263625 18 1482 NP_001119590 18 1482 NP_001263690 18 1482 NP_001119585 18 1482 NP_001263624 18 1482 NP_001119588 18 1482 NP_001119587 18 1482 NP_001119589 18 1482 NP_001263627 18 1482 NP_001263628 18 1482 NP_001263626 18 1482 NP_005002 17 4312 NP_001035199 17 4312 NP_001239553 16 7355 NP_004658 16 7355 NP_001106272 16 7355 NP_001106271 16 7355 NP_066920 16 7355 XP_006720790 16 7355 XP_005268334 16 7355 XP_005268333 16 7355 XP_006720789 16 7355 XP_006712148 16 7355 XP_006712147 16 7355 XP_006712146 16 7355 XP_006712145 16 7355 XP_006712144 16 7355 XP_006712143 16 7355 XP_005264569 16 7355 NP_938009 15 9605 NP_001177736 15 9605 NP_683725 15 9605 NP_689909 15 9605 XP_005270670 15 9605 XP_005270669 15 9605 XP_006710506 15 9605 XP_005270668 15 9605 XP_005270667 15 9605 XP_005270666 15 9605>NP_000537 Length = 393 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLADSS 9 TIITL DSS Sbjct: 253 TIITLEDSS 261>NP_001263689 Length = 354 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLADSS 9 TIITL DSS Sbjct: 214 TIITLEDSS 222>NP_001119584 Length = 393 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLADSS 9 TIITL DSS Sbjct: 253 TIITLEDSS 261>NP_001119586 Length = 341 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLADSS 9 TIITL DSS Sbjct: 253 TIITLEDSS 261>NP_001263625 Length = 302 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLADSS 9 TIITL DSS Sbjct: 214 TIITLEDSS 222>NP_001119590 Length = 354 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLADSS 9 TIITL DSS Sbjct: 214 TIITLEDSS 222>NP_001263690 Length = 354 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLADSS 9 TIITL DSS Sbjct: 214 TIITLEDSS 222>NP_001119585 Length = 346 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLADSS 9 TIITL DSS Sbjct: 253 TIITLEDSS 261>NP_001263624 Length = 307 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLADSS 9 TIITL DSS Sbjct: 214 TIITLEDSS 222>NP_001119588 Length = 209 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLADSS 9 TIITL DSS Sbjct: 121 TIITLEDSS 129>NP_001119587 Length = 261 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLADSS 9 TIITL DSS Sbjct: 121 TIITLEDSS 129>NP_001119589 Length = 214 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLADSS 9 TIITL DSS Sbjct: 121 TIITLEDSS 129>NP_001263627 Length = 182 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLADSS 9 TIITL DSS Sbjct: 94 TIITLEDSS 102>NP_001263628 Length = 187 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLADSS 9 TIITL DSS Sbjct: 94 TIITLEDSS 102>NP_001263626 Length = 234 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLADSS 9 TIITL DSS Sbjct: 94 TIITLEDSS 102>NP_005002 Length = 503 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TIITLADSS 9 T+ TLAD+S Sbjct: 327 TVATLADAS 335>NP_001035199 Length = 503 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TIITLADSS 9 T+ TLAD+S Sbjct: 327 TVATLADAS 335>NP_001239553 Length = 965 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TIITLAD 7 T+IT+AD Sbjct: 666 TVITIAD 672>NP_004658 Length = 4834 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TIITLADSS 9 T++TLA S+ Sbjct: 868 TVVTLASSA 876>NP_001106272 Length = 960 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TIITLAD 7 T+IT+AD Sbjct: 661 TVITIAD 667>NP_001106271 Length = 968 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TIITLAD 7 T+IT+AD Sbjct: 669 TVITIAD 675>NP_066920 Length = 973 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TIITLAD 7 T+IT+AD Sbjct: 674 TVITIAD 680>XP_006720790 Length = 4748 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TIITLADSS 9 T++TLA S+ Sbjct: 782 TVVTLASSA 790>XP_005268334 Length = 4796 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TIITLADSS 9 T++TLA S+ Sbjct: 830 TVVTLASSA 838>XP_005268333 Length = 4796 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TIITLADSS 9 T++TLA S+ Sbjct: 830 TVVTLASSA 838>XP_006720789 Length = 4829 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TIITLADSS 9 T++TLA S+ Sbjct: 868 TVVTLASSA 876>XP_006712148 Length = 973 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TIITLAD 7 T+IT+AD Sbjct: 674 TVITIAD 680>XP_006712147 Length = 973 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TIITLAD 7 T+IT+AD Sbjct: 674 TVITIAD 680>XP_006712146 Length = 973 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TIITLAD 7 T+IT+AD Sbjct: 674 TVITIAD 680>XP_006712145 Length = 973 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TIITLAD 7 T+IT+AD Sbjct: 674 TVITIAD 680>XP_006712144 Length = 973 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TIITLAD 7 T+IT+AD Sbjct: 674 TVITIAD 680>XP_006712143 Length = 996 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TIITLAD 7 T+IT+AD Sbjct: 697 TVITIAD 703>XP_005264569 Length = 1003 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TIITLAD 7 T+IT+AD Sbjct: 704 TVITIAD 710>NP_938009 Length = 1210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IITLADSS 9 ++T ADSS Sbjct: 85 VVTAADSS 92>NP_001177736 Length = 124 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TIITLADSS 9 T+IT DSS Sbjct: 88 TLITTIDSS 96>NP_683725 Length = 134 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TIITLADSS 9 T+IT DSS Sbjct: 98 TLITTIDSS 106>NP_689909 Length = 1075 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IITLADSS 9 ++T ADSS Sbjct: 85 VVTAADSS 92>XP_005270670 Length = 1210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IITLADSS 9 ++T ADSS Sbjct: 85 VVTAADSS 92>XP_005270669 Length = 1210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IITLADSS 9 ++T ADSS Sbjct: 85 VVTAADSS 92>XP_006710506 Length = 1247 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IITLADSS 9 ++T ADSS Sbjct: 156 VVTAADSS 163>XP_005270668 Length = 1256 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IITLADSS 9 ++T ADSS Sbjct: 156 VVTAADSS 163>XP_005270667 Length = 1280 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IITLADSS 9 ++T ADSS Sbjct: 156 VVTAADSS 163>XP_005270666 Length = 1281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IITLADSS 9 ++T ADSS Sbjct: 156 VVTAADSS 163Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.120 0.275 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 361,456 Number of extensions: 541 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |