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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_065681                                                              20     390
NP_066124                                                              20     390
XP_006717999                                                           20     390
NP_689938                                                              17    4312
NP_001138667                                                           17    4312
NP_001269662                                                           17    4312
NP_001269663                                                           17    4312
NP_001036236                                                           16    7355
NP_005347                                                              16    7355
NP_116218                                                              16    7355
XP_006719717                                                           16    7355
XP_005254027                                                           16    7355
XP_005270921                                                           16    7355
XP_005270920                                                           16    7355
XP_005270919                                                           16    7355
NP_001007469                                                           15    9605
NP_003064                                                              15    9605
NP_056331                                                              15    9605
NP_005269                                                              15    9605
NP_001001996                                                           15    9605
NP_001001995                                                           15    9605
NP_001001994                                                           15    9605
NP_001245139                                                           15    9605
XP_005274547                                                           15    9605
XP_005274546                                                           15    9605
XP_005273949                                                           15    9605

>NP_065681
          Length = 1072

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2   GYTTVAVK 9
           GYTTVAVK
Sbjct: 751 GYTTVAVK 758



>NP_066124
          Length = 1114

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2   GYTTVAVK 9
           GYTTVAVK
Sbjct: 751 GYTTVAVK 758



>XP_006717999
          Length = 1207

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2   GYTTVAVK 9
           GYTTVAVK
Sbjct: 844 GYTTVAVK 851



>NP_689938
          Length = 654

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   GYTTVAV 8
           GY+TVAV
Sbjct: 368 GYSTVAV 374



>NP_001138667
          Length = 691

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   GYTTVAV 8
           GY+TVAV
Sbjct: 368 GYSTVAV 374



>NP_001269662
          Length = 690

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   GYTTVAV 8
           GY+TVAV
Sbjct: 368 GYSTVAV 374



>NP_001269663
          Length = 557

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   GYTTVAV 8
           GY+TVAV
Sbjct: 234 GYSTVAV 240



>NP_001036236
          Length = 509

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   GYTTVAVK 9
           G+T VAVK
Sbjct: 266 GHTKVAVK 273



>NP_005347
          Length = 509

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   GYTTVAVK 9
           G+T VAVK
Sbjct: 266 GHTKVAVK 273



>NP_116218
          Length = 452

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   GYTTVAV 8
           GY TVAV
Sbjct: 429 GYETVAV 435



>XP_006719717
          Length = 452

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   GYTTVAV 8
           GY TVAV
Sbjct: 429 GYETVAV 435



>XP_005254027
          Length = 452

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   GYTTVAV 8
           GY TVAV
Sbjct: 429 GYETVAV 435



>XP_005270921
          Length = 553

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   GYTTVAVK 9
           G+T VAVK
Sbjct: 310 GHTKVAVK 317



>XP_005270920
          Length = 567

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   GYTTVAVK 9
           G+T VAVK
Sbjct: 324 GHTKVAVK 331



>XP_005270919
          Length = 567

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   GYTTVAVK 9
           G+T VAVK
Sbjct: 324 GHTKVAVK 331



>NP_001007469
          Length = 376

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2  GYTTVA 7
          GYTT+A
Sbjct: 71 GYTTLA 76



>NP_003064
          Length = 385

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2  GYTTVA 7
          GYTT+A
Sbjct: 80 GYTTLA 85



>NP_056331
          Length = 353

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2  GYTTVA 7
          GYTT+A
Sbjct: 82 GYTTLA 87



>NP_005269
          Length = 265

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   YTTVAVK 9
           YTT AVK
Sbjct: 111 YTTSAVK 117



>NP_001001996
          Length = 305

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   YTTVAVK 9
           YTT AVK
Sbjct: 151 YTTSAVK 157



>NP_001001995
          Length = 328

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   YTTVAVK 9
           YTT AVK
Sbjct: 151 YTTSAVK 157



>NP_001001994
          Length = 246

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3  YTTVAVK 9
          YTT AVK
Sbjct: 92 YTTSAVK 98



>NP_001245139
          Length = 353

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2  GYTTVA 7
          GYTT+A
Sbjct: 82 GYTTLA 87



>XP_005274547
          Length = 269

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3  YTTVAVK 9
          YTT AVK
Sbjct: 92 YTTSAVK 98



>XP_005274546
          Length = 288

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   YTTVAVK 9
           YTT AVK
Sbjct: 111 YTTSAVK 117



>XP_005273949
          Length = 367

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GYTTVA 7
           GYTT+A
Sbjct: 96  GYTTLA 101



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.310    0.121    0.326 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 411,359
Number of extensions: 298
Number of successful extensions: 26
Number of sequences better than 10000.0: 26
Number of HSP's gapped: 26
Number of HSP's successfully gapped: 26
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.6 bits)
S2: 28 (15.4 bits)