Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 299 NP_001075109 20 299 NP_004657 18 1935 NP_056262 17 4312 XP_005263454 17 4312 XP_005263453 17 4312 NP_775099 16 5631 NP_056472 16 5631 NP_066301 16 5631 XP_005251089 16 5631 XP_005251088 16 5631 NP_073210 16 7355 NP_065923 16 7355 XP_006724394 16 7355 XP_006724393 16 7355 XP_006724392 16 7355 XP_005261339 16 7355 XP_005264816 16 7355 XP_005264815 16 7355 XP_005264814 16 7355 NP_619639 15 9605 NP_001843 15 9605 NP_733842 15 9605 NP_001074295 15 9605 NP_000907 15 9605 NP_004658 15 9605 NP_569120 15 9605 NP_001387 15 9605 NP_001095915 15 9605 NP_115597 15 9605 NP_001034779 15 9605 NP_001171487 15 9605 NP_001035236 15 9605 XP_005260990 15 9605 XP_005260988 15 9605 XP_006724042 15 9605 XP_006724041 15 9605 XP_006724040 15 9605 XP_006724039 15 9605 XP_005260633 15 9605 XP_005260632 15 9605 XP_005260631 15 9605 XP_005260630 15 9605 XP_006720790 15 9605 XP_005268334 15 9605 XP_005268333 15 9605 XP_006720789 15 9605 XP_005272427 15 9605 XP_005272426 15 9605 XP_005246752 15 9605 XP_005246751 15 9605 XP_005270537 15 9605 XP_006710428 15 9605 XP_003846678 15 9605 NP_005137 15 9605>NP_008835 Length = 4128 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGVAGNRTS 9 TG AGNRTS Sbjct: 1315 TGAAGNRTS 1323>NP_001075109 Length = 4097 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGVAGNRTS 9 TG AGNRTS Sbjct: 1315 TGAAGNRTS 1323>NP_004657 Length = 513 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TGVAGNRT 8 TGVAGN T Sbjct: 348 TGVAGNYT 355>NP_056262 Length = 1602 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TGVAGNR 7 TGVAG+R Sbjct: 1082 TGVAGHR 1088>XP_005263454 Length = 1324 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TGVAGNR 7 TGVAG+R Sbjct: 804 TGVAGHR 810>XP_005263453 Length = 1613 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TGVAGNR 7 TGVAG+R Sbjct: 1093 TGVAGHR 1099>NP_775099 Length = 2595 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGVAGNRT 8 TGV NRT Sbjct: 1916 TGVPANRT 1923>NP_056472 Length = 2277 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGVAGNRT 8 TGV NRT Sbjct: 1598 TGVPANRT 1605>NP_066301 Length = 538 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TGVAGNR 7 TG+AG+R Sbjct: 315 TGIAGSR 321>XP_005251089 Length = 480 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TGVAGNR 7 TG+AG+R Sbjct: 413 TGIAGSR 419>XP_005251088 Length = 636 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TGVAGNR 7 TG+AG+R Sbjct: 413 TGIAGSR 419>NP_073210 Length = 476 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TGVAGNR 7 TGV GN+ Sbjct: 117 TGVVGNK 123>NP_065923 Length = 1028 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VAGNRTS 9 VAGN TS Sbjct: 857 VAGNETS 863>XP_006724394 Length = 397 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TGVAGNR 7 TGV GN+ Sbjct: 38 TGVVGNK 44>XP_006724393 Length = 398 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TGVAGNR 7 TGV GN+ Sbjct: 38 TGVVGNK 44>XP_006724392 Length = 398 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TGVAGNR 7 TGV GN+ Sbjct: 38 TGVVGNK 44>XP_005261339 Length = 477 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TGVAGNR 7 TGV GN+ Sbjct: 117 TGVVGNK 123>XP_005264816 Length = 647 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VAGNRTS 9 VAGN TS Sbjct: 476 VAGNETS 482>XP_005264815 Length = 923 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VAGNRTS 9 VAGN TS Sbjct: 752 VAGNETS 758>XP_005264814 Length = 1028 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VAGNRTS 9 VAGN TS Sbjct: 857 VAGNETS 863>NP_619639 Length = 4074 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GVAGNRT 8 GV+GN T Sbjct: 1694 GVSGNHT 1700>NP_001843 Length = 689 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GVAGNR 7 G+AGNR Sbjct: 499 GLAGNR 504>NP_733842 Length = 3396 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GVAGNRT 8 GV+GN T Sbjct: 1694 GVSGNHT 1700>NP_001074295 Length = 1406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GVAGNR 7 G+AGNR Sbjct: 897 GLAGNR 902>NP_000907 Length = 389 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GVAGNRTS 9 G GNRT+ Sbjct: 22 GAEGNRTA 29>NP_004658 Length = 4834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGVAGNRTS 9 TG +GN +S Sbjct: 2483 TGASGNASS 2491>NP_569120 Length = 754 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGVAGNRT 8 TG+AG+ T Sbjct: 703 TGIAGHPT 710>NP_001387 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGVAGNRT 8 TG+AG+ T Sbjct: 712 TGIAGHPT 719>NP_001095915 Length = 302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGVAGNRT 8 TG+AG R+ Sbjct: 52 TGLAGRRS 59>NP_115597 Length = 2715 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGVAGNRTS 9 T AG+RTS Sbjct: 2131 TSSAGSRTS 2139>NP_001034779 Length = 121 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TGVAGN 6 TG+AGN Sbjct: 32 TGLAGN 37>NP_001171487 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GVAGNR 7 GV+GNR Sbjct: 5 GVSGNR 10>NP_001035236 Length = 121 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TGVAGN 6 TG+AGN Sbjct: 32 TGLAGN 37>XP_005260990 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGVAGNRT 8 TG+AG+ T Sbjct: 484 TGIAGHPT 491>XP_005260988 Length = 734 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGVAGNRT 8 TG+AG+ T Sbjct: 683 TGIAGHPT 690>XP_006724042 Length = 754 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGVAGNRT 8 TG+AG+ T Sbjct: 703 TGIAGHPT 710>XP_006724041 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGVAGNRT 8 TG+AG+ T Sbjct: 712 TGIAGHPT 719>XP_006724040 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGVAGNRT 8 TG+AG+ T Sbjct: 712 TGIAGHPT 719>XP_006724039 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGVAGNRT 8 TG+AG+ T Sbjct: 712 TGIAGHPT 719>XP_005260633 Length = 1364 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGVAGNRTS 9 T AG+RTS Sbjct: 780 TSSAGSRTS 788>XP_005260632 Length = 2377 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGVAGNRTS 9 T AG+RTS Sbjct: 2131 TSSAGSRTS 2139>XP_005260631 Length = 2667 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGVAGNRTS 9 T AG+RTS Sbjct: 2083 TSSAGSRTS 2091>XP_005260630 Length = 2693 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGVAGNRTS 9 T AG+RTS Sbjct: 2109 TSSAGSRTS 2117>XP_006720790 Length = 4748 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGVAGNRTS 9 TG +GN +S Sbjct: 2397 TGASGNASS 2405>XP_005268334 Length = 4796 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGVAGNRTS 9 TG +GN +S Sbjct: 2445 TGASGNASS 2453>XP_005268333 Length = 4796 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGVAGNRTS 9 TG +GN +S Sbjct: 2445 TGASGNASS 2453>XP_006720789 Length = 4829 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGVAGNRTS 9 TG +GN +S Sbjct: 2478 TGASGNASS 2486>XP_005272427 Length = 1406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GVAGNR 7 G+AGNR Sbjct: 897 GLAGNR 902>XP_005272426 Length = 1406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GVAGNR 7 G+AGNR Sbjct: 897 GLAGNR 902>XP_005246752 Length = 1117 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GVAGNR 7 GV+GNR Sbjct: 5 GVSGNR 10>XP_005246751 Length = 1147 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GVAGNR 7 GV+GNR Sbjct: 5 GVSGNR 10>XP_005270537 Length = 595 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GVAGNR 7 G+AGNR Sbjct: 405 GLAGNR 410>XP_006710428 Length = 689 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GVAGNR 7 G+AGNR Sbjct: 499 GLAGNR 504>XP_003846678 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GVAGNRTS 9 GVAG R S Sbjct: 115 GVAGQRRS 122>NP_005137 Length = 800 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GVAGNR 7 G+AGNR Sbjct: 570 GLAGNR 575Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.301 0.118 0.316 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 570,225 Number of extensions: 1051 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |