Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 19 665 XP_005262424 19 665 NP_001124295 17 3301 NP_001370 17 3301 XP_006722744 17 3301 NP_899236 15 9605 NP_056363 15 9605 NP_001138241 15 9605 NP_001138242 15 9605 NP_004037 15 9605 NP_001785 15 9605 NP_061092 15 9605 NP_001032728 15 9605 NP_001001937 15 9605 NP_001398 15 9605 NP_689865 15 9605 NP_001201838 15 9605 NP_001626 15 9605 NP_001244263 15 9605 NP_647477 15 9605 XP_005254804 15 9605 XP_006720791 15 9605 XP_005254803 15 9605 XP_005254800 15 9605 XP_005254799 15 9605 XP_006720281 15 9605 XP_006720280 15 9605 XP_006720279 15 9605 XP_005267972 15 9605 XP_005267971 15 9605 XP_006720278 15 9605 XP_005267970 15 9605 XP_006715754 15 9605 XP_006715753 15 9605 XP_006715752 15 9605 XP_006715232 15 9605 XP_005249382 15 9605 XP_005249381 15 9605 XP_005249380 15 9605 XP_005249379 15 9605 XP_005249377 15 9605 XP_005249376 15 9605 XP_005249375 15 9605 XP_005249374 15 9605 XP_005249373 15 9605 XP_005249372 15 9605 XP_005249371 15 9605 XP_005249370 15 9605 XP_005249369 15 9605 XP_005249368 15 9605 XP_005249367 15 9605 XP_005247642 15 9605 XP_005247641 15 9605 XP_005247640 15 9605 XP_005247639 15 9605 NP_001201835 15 9605 NP_003913 15 9605 NP_065766 15 9605>NP_722576 Length = 3080 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TGLVSKNVM 9 TGLVSK+VM Sbjct: 1927 TGLVSKDVM 1935>XP_005262424 Length = 2875 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TGLVSKNVM 9 TGLVSK+VM Sbjct: 1722 TGLVSKDVM 1730>NP_001124295 Length = 1632 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGLVSKNV 8 TGL+ KN+ Sbjct: 440 TGLIEKNI 447>NP_001370 Length = 1616 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGLVSKNV 8 TGL+ KN+ Sbjct: 424 TGLIEKNI 431>XP_006722744 Length = 1495 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGLVSKNV 8 TGL+ KN+ Sbjct: 303 TGLIEKNI 310>NP_899236 Length = 5497 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LVSKNVM 9 ++SKN+M Sbjct: 2110 IISKNIM 2116>NP_056363 Length = 5171 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LVSKNVM 9 ++SKN+M Sbjct: 1784 IISKNIM 1790>NP_001138241 Length = 5675 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LVSKNVM 9 ++SKN+M Sbjct: 2288 IISKNIM 2294>NP_001138242 Length = 5537 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LVSKNVM 9 ++SKN+M Sbjct: 2150 IISKNIM 2156>NP_004037 Length = 553 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GLVSKNVM 9 GLVS+N + Sbjct: 19 GLVSRNAL 26>NP_001785 Length = 916 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TGLVSKNVM 9 T L+S+N++ Sbjct: 41 TALISQNIL 49>NP_061092 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TGLVSKNVM 9 TG+++ NV+ Sbjct: 170 TGIIAANVL 178>NP_001032728 Length = 329 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TGLVSKNVM 9 TG+++ NV+ Sbjct: 170 TGIIAANVL 178>NP_001001937 Length = 553 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GLVSKNVM 9 GLVS+N + Sbjct: 19 GLVSRNAL 26>NP_001398 Length = 3312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GLVSKNVM 9 GLV+ N+M Sbjct: 2318 GLVTPNIM 2325>NP_689865 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TGLVSKNVM 9 TGL S+NV+ Sbjct: 26 TGLGSENVI 34>NP_001201838 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TGLVSKNVM 9 TGL S+NV+ Sbjct: 26 TGLGSENVI 34>NP_001626 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGLVSKNV 8 TG+ +KNV Sbjct: 6 TGIFAKNV 13>NP_001244263 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GLVSKNVM 9 GLVS+N + Sbjct: 19 GLVSRNAL 26>NP_647477 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGLVSKNV 8 TG+ +KNV Sbjct: 6 TGIFAKNV 13>XP_005254804 Length = 4796 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGLVSKNV 8 TGL KNV Sbjct: 4273 TGLQGKNV 4280>XP_006720791 Length = 4853 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGLVSKNV 8 TGL KNV Sbjct: 4330 TGLQGKNV 4337>XP_005254803 Length = 4854 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGLVSKNV 8 TGL KNV Sbjct: 4331 TGLQGKNV 4338>XP_005254800 Length = 4861 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGLVSKNV 8 TGL KNV Sbjct: 4338 TGLQGKNV 4345>XP_005254799 Length = 4861 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGLVSKNV 8 TGL KNV Sbjct: 4338 TGLQGKNV 4345>XP_006720281 Length = 937 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TGLVSKNV 8 +GLV KNV Sbjct: 21 SGLVYKNV 28>XP_006720280 Length = 945 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TGLVSKNV 8 +GLV KNV Sbjct: 29 SGLVYKNV 36>XP_006720279 Length = 1191 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TGLVSKNV 8 +GLV KNV Sbjct: 275 SGLVYKNV 282>XP_005267972 Length = 1325 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TGLVSKNV 8 +GLV KNV Sbjct: 461 SGLVYKNV 468>XP_005267971 Length = 1344 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TGLVSKNV 8 +GLV KNV Sbjct: 461 SGLVYKNV 468>XP_006720278 Length = 1349 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TGLVSKNV 8 +GLV KNV Sbjct: 461 SGLVYKNV 468>XP_005267970 Length = 1377 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TGLVSKNV 8 +GLV KNV Sbjct: 461 SGLVYKNV 468>XP_006715754 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGLVSKNV 8 TG+ +KNV Sbjct: 6 TGIFAKNV 13>XP_006715753 Length = 819 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGLVSKNV 8 TG+ +KNV Sbjct: 6 TGIFAKNV 13>XP_006715752 Length = 1225 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGLVSKNV 8 TG+ +KNV Sbjct: 6 TGIFAKNV 13>XP_006715232 Length = 7498 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LVSKNVM 9 ++SKN+M Sbjct: 4196 IISKNIM 4202>XP_005249382 Length = 5732 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LVSKNVM 9 ++SKN+M Sbjct: 2321 IISKNIM 2327>XP_005249381 Length = 7281 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LVSKNVM 9 ++SKN+M Sbjct: 3870 IISKNIM 3876>XP_005249380 Length = 7607 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LVSKNVM 9 ++SKN+M Sbjct: 4196 IISKNIM 4202>XP_005249379 Length = 7633 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LVSKNVM 9 ++SKN+M Sbjct: 4222 IISKNIM 4228>XP_005249377 Length = 7640 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LVSKNVM 9 ++SKN+M Sbjct: 4229 IISKNIM 4235>XP_005249376 Length = 7647 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LVSKNVM 9 ++SKN+M Sbjct: 4236 IISKNIM 4242>XP_005249375 Length = 7680 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LVSKNVM 9 ++SKN+M Sbjct: 4269 IISKNIM 4275>XP_005249374 Length = 7709 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LVSKNVM 9 ++SKN+M Sbjct: 4407 IISKNIM 4413>XP_005249373 Length = 7723 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LVSKNVM 9 ++SKN+M Sbjct: 4312 IISKNIM 4318>XP_005249372 Length = 7785 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LVSKNVM 9 ++SKN+M Sbjct: 4374 IISKNIM 4380>XP_005249371 Length = 7788 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LVSKNVM 9 ++SKN+M Sbjct: 4407 IISKNIM 4413>XP_005249370 Length = 7794 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LVSKNVM 9 ++SKN+M Sbjct: 4407 IISKNIM 4413>XP_005249369 Length = 7797 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LVSKNVM 9 ++SKN+M Sbjct: 4386 IISKNIM 4392>XP_005249368 Length = 7812 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LVSKNVM 9 ++SKN+M Sbjct: 4407 IISKNIM 4413>XP_005249367 Length = 7818 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LVSKNVM 9 ++SKN+M Sbjct: 4407 IISKNIM 4413>XP_005247642 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TGLVSKNVM 9 TG+++ NV+ Sbjct: 170 TGIIAANVL 178>XP_005247641 Length = 345 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TGLVSKNVM 9 TG+++ NV+ Sbjct: 170 TGIIAANVL 178>XP_005247640 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TGLVSKNVM 9 TG+++ NV+ Sbjct: 170 TGIIAANVL 178>XP_005247639 Length = 394 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TGLVSKNVM 9 TG+++ NV+ Sbjct: 170 TGIIAANVL 178>NP_001201835 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TGLVSKNVM 9 TGL S+NV+ Sbjct: 26 TGLGSENVI 34>NP_003913 Length = 4861 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGLVSKNV 8 TGL KNV Sbjct: 4338 TGLQGKNV 4345>NP_065766 Length = 1364 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TGLVSKNV 8 +GLV KNV Sbjct: 461 SGLVYKNV 468Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.125 0.316 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 391,900 Number of extensions: 550 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |